Nitrincola iocasae: F5I99_11435 Help Entry F5I99_11435       CDS       T06212                                  Name (GenBank) DEAD/DEAH box helicase   KO K11927   ATP-dependent RNA helicase RhlE [EC:5.6.2.7] Organism nik  Nitrincola iocasae Pathway nik03018   RNA degradation Brite KEGG Orthology (KO) [BR:nik00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     F5I99_11435  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nik03019]     F5I99_11435 Enzymes [BR:nik01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      F5I99_11435 Messenger RNA biogenesis [BR:nik03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      F5I99_11435 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII AAA_19 CMS1 AAA_22 P-loop_SecA AAA_25 Flavi_DEAD DUF4786 Motif Other DBs NCBI-ProteinID:  QEW07070 UniProt:  A0A5J6LEM8 LinkDB All DBs Position complement(2479174..2480439) Genome browser AA seq 421 aa AA seqDB search MSFATLGLSDSILKAVTEQGYDTPSPIQSQAIPIVLAGKDLMAAAQTGTGKTAGFTLPIL ERLSQGKPATANQVRTLILTPTRELAAQVAESVSTYGRYLPLRSAVVFGGVKINPQMMKL RKGVDVLIATPGRLMDLYKQNAVRFDQLEVLVLDEADRMLDMGFIHDIKRIMAILPAKRQ TLMFSATFSTEIRKLAKGLLNDPQEVSVTPSNAAAPSVEQWICPVDKNQKAGLLCNLIHQ GKWQQVLVFTRTKHGANKLTKQLESNHITAIAIHGNKSQNARTKALADFKAGEVRVLVAT DIAARGLDIDHLPHVVNYDLPNVPEDYVHRIGRTGRAGKVGVAVSLVCADELDHLRSIER LTQKVLERRLVAGFEPVHPLPDTSLAAPRHKPQGARRKPATGHRDGVRSGELARGHRPAR R NT seq 1266 nt NT seq  +upstreamnt  +downstreamnt atgagttttgccacactggggttatctgactccattctgaaagcagtaaccgaacagggt tacgataccccttccccgatccagagccaggccatacccattgtgttagcaggtaaagac ctgatggccgctgcgcaaacgggtacagggaaaaccgccggttttaccctgccgattctg gaacgcttaagccagggtaagcccgcaacggctaaccaggtacgcacccttattttaacc ccgacacgtgaactggccgctcaggttgctgaaagcgtgagcacttatggccgttatctg ccattgcgctcggctgtggtgtttgggggggtaaaaatcaatccgcagatgatgaagctg cgcaaaggtgtggatgtattgatcgctacgccgggtcggttgatggatttgtataagcaa aatgcggtgcgttttgatcagttggaagtactggtgctggatgaagctgaccggatgctg gacatgggttttatccatgatatcaaacgtatcatggcgattctgcctgccaagcgtcag acactgatgttttcggcaaccttttccacagagatacgtaaacttgccaagggtttactt aatgatccgcaagaagtgtcggtgacaccgtccaatgcagccgcgcctagcgttgagcag tggatttgtccggtggataaaaaccagaaagctggtttgctatgcaatctgattcatcag ggaaaatggcagcaggtgttggtatttacccgaaccaagcacggtgctaacaagctgacc aaacagctggaatctaaccatattaccgctatcgctattcatggtaataagagccagaat gcgcgtactaaagccctggctgattttaaagccggtgaggtacgggtattagtagcaact gatattgccgcgcgtggtctggatatcgatcatctaccccatgtggttaactatgacctc cctaatgtgccggaagactatgtgcaccgtattggtcgtaccggacgtgccggaaaggtc ggtgtcgctgtgtcactggtgtgtgccgatgaactggatcatttgcgttcgattgagcgc ctgacccagaaagtactggaacgtcgtttggtagccggttttgagccggttcaccctttg ccagataccagtctggcagctcctagacataaacctcagggtgccaggcgtaagcccgca accggacaccgtgatggtgtgcgttcaggtgaactggccagagggcatcgacccgcgcgt cgataa

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