Nitrincola iocasae: F5I99_16600
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Entry
F5I99_16600 CDS
T06212
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
nik
Nitrincola iocasae
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nik03009
]
F5I99_16600 (dbpA)
Enzymes [BR:
nik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
F5I99_16600 (dbpA)
Ribosome biogenesis [BR:
nik03009
]
Prokaryotic type
rRNA helicases
F5I99_16600 (dbpA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
AP-5_subunit_s1
Motif
Other DBs
NCBI-ProteinID:
QEW07978
UniProt:
A0A5J6LHL0
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All DBs
Position
3598645..3600024
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AA seq
459 aa
AA seq
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MTTSLFSNLNLPAAALTNLAQMGYEQMTPIQQQSLPLVLSGRDLIAQAQTGSGKTAAFGI
GMLETLNPRLFAVQGLVLCPTRELAGQVAGELRKLARYLDNIKIITLCGGQPIGPQIGSL
EHGAHIVVGTPGRLRDHLRKETLKLDRLSMLVLDEADRMLDMGFEEDIRFIIGATPAKRQ
TLLFSATYPEQIESISAAYQYDPVRVSIDTQHDDSTIEQKVWYCDSKHKAAAVAAVLQHF
APEAAIIFCNTKQGCNDMANALRDYDLKSLSLHGDLEQRERDQVLIRFSNGSSRYLLATD
VAARGLDIDAVDLVINADLPQDPAVYTHRVGRTGRAGRKGIAICLCGERDKHRLQRIEAL
QSQPIIAIDNLPTATPDRNPAPAEMTTLCIAGGRKDKLRAGDILGALTRAGGIDAKQIGK
IDITDHACYVAVHRRIAADALEQLKLGKIKGRTFRARRI
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacctctctgttcagcaacctaaacctcccagccgccgccctgaccaatctcgcc
cagatgggttatgaacagatgacgccgattcagcaacagagcctgcccctggtactgtcg
ggtcgtgacctgatcgcccaggcacagaccggcagcggtaaaaccgcggcgtttggtatc
ggtatgctggaaacgcttaatcctcgtctgtttgcggtacaaggactggtgctctgccct
acccgtgagctggctggacaggtggcgggcgaactgcgcaaattggcacgctatctcgac
aatatcaaaatcattaccctgtgtggcggccaacctatcggtccacaaatcggctcgctg
gaacatggcgcgcatatcgttgtggggactccgggacgtctgcgcgatcacctgcgcaag
gaaacactcaaactggatcgcctcagcatgctagtgctggatgaagccgaccgcatgctc
gacatgggctttgaagaggatatccgttttattattggcgccacacccgcaaaacgccag
accctgctattttcggccacctacccggaacagatcgaatccatcagtgccgcctatcaa
tatgaccccgtcagagtcagcattgacacccagcacgatgactccactatcgagcagaag
gtctggtactgtgacagcaaacacaaagccgctgccgtagcggccgtgttacagcacttt
gccccggaagcggcaattattttctgtaacaccaaacaaggctgcaacgacatggccaac
gccctgcgagactatgacctaaagtccttgtctctgcacggcgacctggaacaacgtgaa
cgcgaccaggtattgatccgcttcagcaatggcagtagccgctacctgctggctactgat
gttgctgcgcgcggactggatatcgatgcagtggatctggtgatcaatgccgacctgcct
caggacccagccgtttatactcatcgggtaggccgcaccggacgtgccggtcgcaagggt
attgctatctgcctgtgtggtgaacgcgataagcaccgattacagcgtatcgaagccctg
cagtcccagcccatcatagcgatagataacctgccaacagctacacccgatcgcaatcca
gcaccggctgagatgaccacgctttgcattgccggcggacgcaaggataaactgcgggcc
ggtgatattctcggtgctctgacacgtgccggtggcatagacgctaagcagattggcaaa
atcgacatcaccgatcatgcctgctatgtggccgtgcatcgccgtatagcggcggatgca
ctggaacagttaaagttgggaaaaattaaagggcgtacgtttcgcgccagacgtatctaa
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