Candidatus Nitrospira inopinata: NITINOP_0293
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Entry
NITINOP_0293 CDS
T04169
Symbol
ddlB
Name
(GenBank) D-alanine:D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio00470
D-Amino acid metabolism
nio00550
Peptidoglycan biosynthesis
nio01100
Metabolic pathways
nio01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NITINOP_0293 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NITINOP_0293 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NITINOP_0293 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nio01011
]
NITINOP_0293 (ddlB)
Enzymes [BR:
nio01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
NITINOP_0293 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
nio01011
]
Precursor biosynthesis
Amino acid ligase
NITINOP_0293 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATP-grasp
ATPgrasp_ST
CPSase_L_D2
RimK
GARS_A
Motif
Other DBs
NCBI-ProteinID:
CUQ65269
UniProt:
A0A0S4KMX0
LinkDB
All DBs
Position
1:complement(265912..266910)
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AA seq
332 aa
AA seq
DB search
MKRTGRLTAARVGVLMGGRSSERDISLKTGHAVHQSLLRLGYDAVSIDVGDRLLHDLKER
KIGVAFLALHGRGGEDGTIQGFLETIGIPYTGSGVRASAVGMNKVVTKTLLAAHGVPVPP
GVVVKRGEGPPLSKILKDAKLKLPVVVKPASQGSTIGVTIVRRSADWKNALAAAHRYDDE
AVVEAFIPGREITVAVIGGSGGGIEVLPAVEIVAPDGFYDFAAKYQKGKTTYRCPAPLPA
RVSRHVTDLGRRTFAVLGCEGAARVDFRVTPRGRPYVLEINTVPGMTETSLLPMAAAKAG
IDYDRLVERILRSALDRVAPPAQATGRAAVGS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaacgggacggttgacggctgcgcgagtcggggtgttgatgggagggcggtcc
tccgagcgggacatttcgctcaagacgggacatgccgtccatcagtcgttgcttcgtctg
ggatacgacgccgtgtccatcgatgtgggcgatcggctgcttcacgatttgaaggagcgg
aagatcggcgtcgcgtttttggcgttgcacggacggggaggcgaggacggcacgattcaa
ggatttctggagacgatcgggattccctacactggttcgggggtgcgggcaagcgccgtg
gggatgaacaaggtcgtgacgaagacgttgctggcggcgcacggcgttccggttccgccc
ggcgtggtcgtcaagcgtggcgaaggtccgccgctgtcgaaaattctgaaggacgcgaag
ctgaagttgcccgtcgtcgtcaagccggcctcgcagggttccacgatcggggtgaccatc
gtgcgcagatccgccgattggaagaacgccctggctgcggcgcaccgatatgacgatgag
gccgtggtcgaagcattcattcccggacgtgaaatcacggtggcggtgatcggcggatcg
ggagggggaatcgaggttcttccggccgtggaaatcgtggcgcccgacgggttttatgac
tttgcggcgaagtatcagaaagggaaaacgacgtatcggtgtccggctcctttgccggcg
agggtgtcgagacacgtgacggatctggggcgacggacgttcgccgtcctgggctgcgag
ggggcggcgcgcgttgattttcgagtgacgccgcggggtcgtccatacgtcttggaaatc
aataccgttcccggcatgacggaaacgagtctgttgccgatggcggcggcgaaggccggg
atcgattacgaccgattggtcgagcgcattttgcgatcggcgctcgatcgagtcgctccg
ccggcgcaggcaacgggaagggcggcggtgggatcatga
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