Nymphalis io (European peacock): 126772782
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Entry
126772782 CDS
T08495
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
niq
Nymphalis io (European peacock)
Pathway
niq04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126772782
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
niq00536
]
126772782
Glycosaminoglycan binding proteins [BR:
niq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126772782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
PSP94
Motif
Other DBs
NCBI-GeneID:
126772782
NCBI-ProteinID:
XP_050349316
LinkDB
All DBs
Position
13:2710258..2721627
Genome browser
AA seq
1495 aa
AA seq
DB search
MWQAKLACLALLVLPAVAKDLADNKEDELPQAQESDLINYDDYNPFGEDENAIIAERDFR
GSTTATPGYRRPLPQVTRAPISRCLDMGRTFTDGETWKRDNCTLCQCYSNRVNCSVLPSC
LSTPTTSRPLPPPPPAVAAQPTVPIRGFSGEPGVDGPPGPPGVPGVNGVPGSPGIPGPVG
PMPDVNAYLAQLAAAAGGDKGPAFDPYHYMQASVGSPGIRGIPGPQGPPGPQGFQGPRGE
PGEPGLAGQPGPPGERGPQGLPGKDGTPGEDGEPGPVGVAGQPGPRGIPGIPGIQGLKGH
RGFDGKDGAKGEQGLPGEKGPTGLPGQMGPVGPIGPVGPRGERGREGPPGTPGMRGVDGA
PGPPGLMGNVGKTGSPGFPGSPGLKGEQGLNGPKGSQGMQGPRGEPGRPGQPGEVGPTGL
AGQDGIPGEKGIQGQAGSAGPQGFTGPRGTPGVSGDPGIPGSKGMPGQPGERGTKGDSGI
RGETGSPGPRGLPGSIGPEGKRGKRGLRGPAGNVGPQGERGLQGLRGLPGIDGPAGLKGQ
AGDRGSVGLPGSKGSAGDAGRPGPQGLPGTRGIMGRPGITGKSGPPGERGIPGADGRPGE
QGLQGLQGPPGLIGSPGERGLQGEPGKDGEIGQPGPVGPKGDAGRDGSPGAQGPQGPVGA
TGERGPTGPPGPTGFPGMPGSAGLPGSAGKDGEPGVSGPAGPPGPIGPRGERGFSGERGI
PGQPGTSGEKGETGAQGFDGLPGPEGPRGSKGHPGPIGAMGMPGPRGLTGFAGEKGDRGS
VGPQGPEGPQGRQGEQGPQGPVGPTGPPGEPAERGEPGTPGLPGEPGAPGSTGDRGHPGI
QGNPGLSGPPGLTGMPGLKGDRGYAGAKGQQGAPGNPGIPGEPGQRGLSGQIGAKGTRGD
QGAKGDIGHAGLQGRPGDLGPPGPQGSPGPTGSPGIPGAKGATGDSGRSGPPGPQGIAGP
QGPEGTKGERGSEGEIGPQGPPGSPGSPGERGPSGLQGLVGAPGPQGLRGVQGESGMPGK
PGADGAPGPTGAPGLQGPSGPMGEPGPEGRPGKLGQPGIPGRPGDKGPIGQPGQSGPPGP
PGLQGSPGSSGPPGPTGERGPRGESGPPGVDGPQGPAGKQGLPGMDGLKGERGEAGLDGA
KGHAGIPGLPGMMGAPGRIGDRGLPGSIGPPGKDGDAGPRGPPGRDGSPGPLGPSGPPGG
RGSPGEPGRHGTPGPAGPPGPPGPPGEGLAYDAAAIAAMLQQGSIKGPDPLGDDPNSMPP
RFFKDDMSPEERKRIVMKAYERLKVSLDKFLKPDGSKEAPAKTCGDIKYHHPEFTSGQYW
IDPNGGDYNDAILVHCDMATSASCVFPKPMMSEDLTHTGRNEAWLSEIDNGFTISYKADN
SQLTYLQLLSMRAVQNVTLHCRNTVGYYDPATRNYKHGVKLLAFNDAEILPKANNRLRYK
ALLDECQHKKQEWAKTIVQYETDKPGRLPLLDVAVRDVGRHEQMFRIEMGLACFS
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaggcgaaactcgcttgtctggcactgctggtgctaccagctgtggccaaggat
ctagcagacaacaaagaagatgaacttcctcaagctcaagaatcagatctcataaactac
gacgattataatccattcggagaagacgaaaatgctataattgctgaacgagactttaga
ggatcaacgacagccactcctggttatcgccggccattaccacaagttactagagcacca
ataagccgatgcttggatatgggacggacatttactgatggtgaaacttggaagcgggac
aactgcacactctgccagtgttatagcaaccgcgtcaattgttcagtacttccctcatgt
ctgtcaacaccaaccacaagccgccctcttccaccgccacctccggctgtagccgctcaa
ccaacagttccgattagaggcttttcaggcgaaccaggtgttgatggcccgcccggcccg
ccaggtgtaccaggagtaaacggtgtacctggtagccctggaataccagggccggttgga
cctatgcctgatgtgaatgcatacttagctcagttggcagctgctgccggcggagataaa
ggtccagcgtttgacccgtaccattacatgcaggcttctgtaggttctccgggaattcga
ggaataccaggtccgcaaggtcctcctggacctcagggtttccaaggtccaaggggagaa
cctggcgaaccgggtcttgcaggacaaccggggcctcctggagaaagaggacctcaaggc
ctaccaggaaaagatggtactcctggcgaagatggggaacctggtccagtaggagtggcc
ggacagccgggtccacgtggtattccgggaataccaggaattcaaggattaaagggtcat
cgtggcttcgacgggaaagatggcgcaaagggtgaacaagggcttcccggagaaaagggc
ccaactggtttacctggacaaatggggccagtgggacctatcggccccgtgggaccacga
ggtgaaagagggcgagagggtcctcctggtaccccaggcatgcgtggagttgatggagca
cctggaccaccaggtctcatgggtaatgttggaaaaactggttctcctggttttcctgga
tcacccggattgaaaggcgaacaaggacttaatggacccaaaggtagtcaaggtatgcaa
ggtccacgtggtgaacccggacgtccgggtcagcccggagaagtaggtccaacgggattg
gcaggacaagatggaatacctggtgagaaaggaattcaaggacaagctggttctgcggga
cctcaaggtttcacgggaccaagaggtactccaggagtatctggcgatcctggaattcct
ggttccaaaggcatgccgggacaacctggggaacgaggaacaaaaggtgattcaggcata
agaggagaaaccggatctccgggaccaagaggcttgccaggaagcattggaccagaaggg
aaaagaggaaaacggggcttacgggggccagctggaaatgtagggcctcaaggtgaaaga
ggtttacaaggactaagaggattaccgggtattgatggtcctgcaggtctgaaaggtcaa
gcaggtgatagagggagtgttggtcttccgggatctaaaggtagtgctggtgatgccggc
agacctggtccccagggacttccaggaacaagaggcataatgggtagaccaggaataact
ggcaagtcgggaccacctggtgaaagaggtatacctggtgccgatggaaggcctggtgag
caaggattacagggcttgcaaggaccacctggcttgataggcagccctggagaaagagga
ttgcagggtgagccaggtaaagatggcgaaattggtcaacccggacctgtaggccctaaa
ggagacgcagggcgagatggtagccctggcgctcaaggcccacaaggccctgtgggtgct
acaggcgaacgaggtcctacagggccacccggacccactggtttccctggtatgcctgga
tcagctggtttgccaggatctgctggaaaagatggtgagcctggagtatctggtcctgct
ggaccacccggacctattggaccacgtggtgaaagaggtttttcaggcgaaagaggtatc
ccaggtcaacctggtacgtctggagaaaaaggcgaaactggagctcaagggttcgacgga
ttaccgggccctgaaggaccaagagggagtaaaggtcatccaggaccaattggtgcaatg
ggaatgcctggaccacgtggcttaactggtttcgctggtgagaagggtgacagagggtca
gttggtccacagggccccgaaggaccgcaaggtcgccagggcgaacaaggaccccagggt
ccagttggaccaactggaccaccgggagaaccagccgagagaggtgagcctggaactcca
ggcctaccaggagaaccaggtgcacctggttcaactggagatcgtggtcatccgggaata
caaggaaacccgggtttatctggaccaccgggtcttactggcatgcctggattaaaaggt
gatcgaggctatgcaggtgctaaagggcagcaaggagctcctggaaatccaggaatacct
ggagaacctggacaaagaggattatccggacaaataggagccaaaggtacacgaggtgac
cagggtgctaagggcgatataggacatgctggattgcaaggaagaccaggagatttaggg
ccacccggtccacaaggtagtccaggaccaacgggttcaccaggcattccaggtgctaaa
ggggcaactggcgattcgggtagatcaggtcctcctggacctcaaggtatagctggacca
caagggcctgaaggaacaaagggtgaaagaggtagtgaaggagagattgggccgcaggga
ccacctggctctcctggttcacctggagaacgaggtccaagtggcttacaaggattagtt
ggagcccctggacctcaaggcctaaggggtgtgcagggtgagagtggtatgccaggaaag
cctggtgctgacggagcaccaggacctactggagcacctggtctacaaggaccttcaggg
cctatgggtgagccaggaccagaaggtcgtccaggaaaacttggtcagcctggtataccg
ggacggccaggagacaaaggaccgataggacaaccaggacaatcaggaccaccgggtcca
ccaggcttacagggttcacctggttcttctggtccacctggacccactggagaaagagga
cctagaggcgaatccggacctcccggtgtcgatggacctcagggtcctgctggaaaacaa
ggactacctggcatggatggtcttaagggcgaacgcggtgaagctggactcgacggagct
aagggtcatgcaggtatacctggactaccaggtatgatgggtgctcctgggcgaattggt
gacagaggtcttccaggatcaattggaccaccaggaaaagacggagacgcgggtccaaga
ggtccacctggtcgtgacggaagtcctggacctcttggtccaagcggtccgcctggtggt
cgtggatctccaggggaacctggacgtcacggtaccccaggaccagctggtccacctggc
ccgcccggcccacctggagaaggtctagcgtacgatgctgctgctatcgctgctatgtta
caacaaggttcaattaaaggcccggacccattaggtgatgatcccaatagtatgccacct
cgtttcttcaaagatgatatgagcccggaagaaagaaagagaattgtaatgaaagcatac
gaacgactcaaagtatctctcgataaatttttgaaaccagacggatctaaggaagctcca
gcaaaaacatgcggtgacattaaatatcaccaccctgaatttacgagtggtcagtattgg
attgatcctaatggtggagactacaacgatgctatattagtacattgtgatatggcaact
agtgcaagctgcgtgttcccaaagccgatgatgtcagaagatcttacgcatacaggcaga
aatgaagcgtggcttagcgaaattgataacggatttacgatttcttacaaagccgataac
agtcagctcacatacctccagcttctatctatgagagcagttcagaatgtgacgctacac
tgtcgcaatactgtcggatattatgatccagccaccagaaattataagcacggggtgaag
ctacttgcgtttaatgatgcggagattctaccaaaagctaataacagacttagatataag
gctttattggatgaatgtcagcacaagaaacaagaatgggcgaagaccattgtccaatac
gaaacagataagcctgggcgtctcccgctcctggatgtggcggtacgtgacgtcggtaga
cacgagcaaatgttcaggatcgaaatgggtcttgcctgcttcagttaa
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integrated database retrieval system