Candidatus Nitrosopumilus sediminis: NSED_08585
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Entry
NSED_08585 CDS
T02303
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00521
Streptomycin biosynthesis
nir00523
Polyketide sugar unit biosynthesis
nir01100
Metabolic pathways
nir01110
Biosynthesis of secondary metabolites
nir01250
Biosynthesis of nucleotide sugars
Module
nir_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NSED_08585
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NSED_08585
Enzymes [BR:
nir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NSED_08585
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AFS83509
UniProt:
K0BDH7
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All DBs
Position
complement(1452193..1452756)
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AA seq
187 aa
AA seq
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MPFTFKRLNIPDVVLIEAKSFPDDRGFFLESFKESSFISNGIVTRFVQDNFSHSSQGVLR
GLHYQKNPKAQSKLVTALRGEIFDVAVDIRKDSPTYGKWVGEILSESNHKSLYIPEGFAH
GFCVISKTADVLYKVNNEYSPEHEKGIIWNDPDLKITWPIENPILSQKDTQLSSLKDADN
NFTYQSH
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgccatttactttcaagagattaaacatacccgatgtggtacttatagaagcaaaatca
tttcctgatgataggggttttttcctagaaagttttaaagaatcaagcttcatttctaat
ggaattgtcacaagattcgtacaggataatttctcgcattcatcccaaggagttttacgt
ggactgcactaccaaaaaaacccaaaggcacaatccaaactggtaactgcattaagggga
gaaatctttgatgttgcagttgatattcgcaaagattccccaacttatggcaaatgggtt
ggtgaaattctatcggagagcaatcacaagtccctttacatacctgaaggatttgcacat
ggattttgtgtaattagcaaaacagctgatgtgctttacaaggtaaataatgaatattcc
ccagaacatgaaaagggaataatatggaatgatccagacttgaaaattacctggccaatt
gaaaacccaattttatctcagaaagacacacagttatcatcactcaaagatgcagacaat
aactttacgtatcaatcacactag
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