Nitrospira japonica: NSJP_1343
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Entry
NSJP_1343 CDS
T05001
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nja
Nitrospira japonica
Pathway
nja03030
DNA replication
nja03430
Mismatch repair
nja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NSJP_1343 (dnaX)
03430 Mismatch repair
NSJP_1343 (dnaX)
03440 Homologous recombination
NSJP_1343 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nja03032
]
NSJP_1343 (dnaX)
03400 DNA repair and recombination proteins [BR:
nja03400
]
NSJP_1343 (dnaX)
Enzymes [BR:
nja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NSJP_1343 (dnaX)
DNA replication proteins [BR:
nja03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NSJP_1343 (dnaX)
DNA repair and recombination proteins [BR:
nja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NSJP_1343 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
AAA_22
RuvB_N
AAA_30
AAA_5
PIF1
AAA_18
AAA_14
TIP49
TsaE
AAA_19
DUF3646
AAA_16
AAA_assoc_2
AAA_2
SKI
nSTAND3
Sigma54_activat
Glyco_tranf_2_5
Rad17
AAA_24
CbiA
DUF6395
AAA_28
Motif
Other DBs
NCBI-ProteinID:
SLM47515
UniProt:
A0A1W1I3F8
LinkDB
All DBs
Position
I:1301052..1302860
Genome browser
AA seq
602 aa
AA seq
DB search
MDYQVSARKYRPGTFDDVIGQPHVVQTLMNAIASKRVAQAYLFSGTRGVGKTTVARILAK
ALNCERGPTGSPCAVCVNCIEIAQGNSVDVIEIDGASNTSVDDVREIRENVKFAPFRGQY
RIYIIDEVHMLSNSAFNALLKTLEEPPGHVVFIFATTEIHKIPATILSRCQHYNFRRIAR
TEIVERLRHVAAQDDIAIEDRSLTALARASEGSMRDALSLLDQAMAFGGKTVVHTDLELL
LGAVPQELVRAMIQALIAQDSAAALHVLSALLDRGHDLRAYCAEVVEYLRNMLVVSVTAP
DEWSRLIEASSEDLAQFASDKGSFNPDELQQLFAIFTQAEDSLRASAHPRFVLETASVKA
TRLLRKETASSTHPARPLAPERSSSGPAATRTERRPGGEARMAPVTTPIPPAPVAPKSVS
AQEPSPLNAAKPERETAPSPKTKAEAARSAEGTPAGPSPGGEVAVLKWEQFQDEVGQAFP
NVAPFLERGRLVGIEGHVITIGFDKQAGVARAMLEKPDNMQALTALCARLSGQPMRLRIV
EQTEDDPAGPTMAQIRAAKEQEQRLVLFEQARAHPVVKRALEIFGAELTDVRSVTRQKEV
QE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggactaccaagtttcagcccgcaaataccgtcccggcaccttcgacgacgtaatcggt
cagccgcacgtcgtgcagaccttgatgaatgccatcgcatccaagcgggtggcgcaggcc
tatctgttttccggaacacggggggtcggcaagaccaccgtcgccaggatcctggccaag
gcgctcaactgcgaacggggaccgacgggttcgccgtgcgccgtgtgcgtcaattgcatc
gagatcgcgcaggggaattcggtcgacgtgatcgaaatcgacggcgcctccaatacgagc
gtggacgatgtccgggagatccgggaaaacgtcaagtttgctccgttcaggggacaatat
cggatctacatcatcgacgaagtccacatgttgtcgaactccgcgttcaacgcgctgctg
aagaccttggaggagccgcccgggcacgtggtgttcatctttgcgacaacggaaatccat
aagatcccggcgaccattctgtcccgctgccagcactacaattttcgacggatcgcccgg
acggagatcgtggaacggcttcgccatgtggcggcgcaggacgatattgcgatcgaagat
cgaagcctcacggccttggcgcgagccagtgaaggcagtatgcgcgacgcgttgagtttg
ctcgaccaggcgatggcgttcggaggaaagacggtcgtccatacggatctcgaacttctg
ttgggggcggtaccccaggaactcgtccgggccatgattcaagccctcatcgcacaagac
agtgccgccgcgttgcacgtcttgtcggccctgctggatcgaggtcacgatctgcgggcg
tattgcgcggaggttgtcgagtaccttcggaacatgctcgtcgtgtcggtcaccgcgccg
gatgaatggtcgcggttgatcgaagcctcttcggaggatctcgcccaattcgcgtcggac
aagggatcgtttaaccccgacgagctgcagcaactcttcgctatttttacccaggcagag
gacagtctacgggccagcgcccatccccggttcgtgctggagacggcgtcggtgaaagcg
acccgccttctgcgaaaggaaacggcatcctcgacgcatccggcccgcccgcttgcaccg
gagcgttcttcttccggtccggcggcgacgcgcacggagaggcgtcccggcggagaggca
cggatggctccggtgacgactccaatccccccggcgccggtcgcaccgaagtcggtatcc
gcgcaggagccgtcaccgttgaatgcggcaaagccagagagagagaccgcgccgtcaccc
aagacaaaagccgaagctgcgcggtccgccgagggtacgcccgccgggccctctccgggc
ggcgaggtcgcggtgctcaagtgggagcaatttcaagatgaggtgggacaggcgttcccc
aacgtcgcgccctttctcgagaggggacggttggtcggcattgagggtcacgtgatcacg
atcggttttgacaagcaggccggcgtcgcgcgggccatgctggagaagccggacaacatg
caggcgctgaccgcgctctgtgcgagactcagcggtcaaccgatgcggcttcgcatcgtt
gagcagacggaagatgatccggcggggcccacgatggcgcagatcagggcggcaaaggag
caggagcagcggctggtgctctttgagcaggcgcgagcccatccggtggtgaaacgggca
ttggaaattttcggagcggaactcaccgacgtcaggtcggtgacgcggcagaaagaggtg
caggaatga
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