Candidatus Nitrospira kreftii: Nkreftii_003389
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Entry
Nkreftii_003389 CDS
T08052
Name
(GenBank) D-alanine:D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
nkf
Candidatus Nitrospira kreftii
Pathway
nkf00470
D-Amino acid metabolism
nkf00550
Peptidoglycan biosynthesis
nkf01100
Metabolic pathways
nkf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
nkf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Nkreftii_003389
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Nkreftii_003389
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Nkreftii_003389
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nkf01011
]
Nkreftii_003389
Enzymes [BR:
nkf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Nkreftii_003389
Peptidoglycan biosynthesis and degradation proteins [BR:
nkf01011
]
Precursor biosynthesis
Amino acid ligase
Nkreftii_003389
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATPgrasp_ST
ATP-grasp_3
ATP-grasp
GARS_A
ATPgrasp_Ter
RimK
Motif
Other DBs
NCBI-ProteinID:
QPD05615
UniProt:
A0A7S8FGP0
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All DBs
Position
complement(3311679..3312671)
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AA seq
330 aa
AA seq
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MVPTGRITDARIGVLMGGRSSERDISLKTGRAVHQALTRLGYDAVAIDVTDRLHRDLEGH
QVAIAFLSLHGPGGEDGTVQGFLETIGIPYTGSGVRASAVGLHKEVTKTLLASHGIPVAA
GTVVREGDKRSLAKILRESHLDLPIVVKPVAQGSTIGVTVVRRAGQWKEGLALAHHFDSE
AMVESYIPGHEAAVSVIGSAAEGVKTLPAIEIVAPEGFYDFSAKYQKGKTQYLCPAPFPP
KVLRQVSELARRTYEVLGCEGAARVDFRITPRGRPYVLEINTVPGMTETSLLPMAAAQVG
IGYDALVELILQSALDRAARSTPAVKEESA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggtgccaaccggtcgaatcacagatgcgcgaatcggcgtgctcatgggaggacgctct
tcggagcgggacatctctctcaagacaggccgagctgtgcaccaggcactgacccgtctt
ggatacgatgcggtagccatcgacgtcactgatcgtttacatcgagatttagaaggccac
caagtggccatcgcttttctctcgctgcatggacctggaggagaggatggtacggtacaa
gggtttctcgagacgatagggattccatacacaggctctggcgtacgagcgagcgccgtg
ggattgcacaaggaagtcactaaaacactactcgcctcgcatggtattccggtggcagcg
ggaacggtcgtacgggaaggggataaacgttcgctggcaaagatccttagagagtcccat
cttgacttgccgattgtcgtcaaaccggtggcccaggggtctaccatcggagtcacggtc
gtgcgtcgtgccgggcaatggaaggaggggcttgctttagcccatcactttgattcggaa
gcaatggtggagagctatataccgggacatgaagctgccgtgtcggttatcggatcggcg
gcagaaggggtgaaaacgcttccggcgattgaaattgtcgcaccagaaggtttttacgat
ttttcggcgaagtaccaaaagggcaagacccagtatctctgtcccgctccatttcctcca
aaagtgcttcggcaagtcagtgaattggcgcgtcggacgtatgaggtgttggggtgtgag
ggggccgccagagtagattttcgaatcactccgagagggcggccgtacgtgttggagatc
aatacggtgccaggcatgacagaaacgagtctattacccatggcggctgctcaggtcgga
atcggatatgacgccttagtcgagctaattttgcagtcggcactggatcgcgctgctcga
tctactcccgcagtaaaagaggagtcagcatga
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