KEGG   Niastella koreensis: Niako_1577Help
Entry
Niako_1577        CDS       T01679                                 

Definition
(GenBank) DNA ligase D
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
nko  Niastella koreensis
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:nko00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    Niako_1577
Enzymes [BR:nko01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Niako_1577
DNA repair and recombination proteins [BR:nko03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Niako_1577
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(1949439..1952243)
Genome map
AA seq 934 aa AA seqDB search
MSLATYKKKRSFNQTPEPEGKKPAGKKTAVSSQLHFVVQKHDATRLHYDFRLEMEGVLKS
WAVPKGPSMNPADKRLAMMVEDHPYDYKDFEGIIPEGNYGAGTVIVWDEGTYEPIEPFDD
PKKAEKHLLEQLRKGSLKIVLHGQKLKGEFALVQIKSSEDNAWLLIKHNDKYATQTDVTK
KAKSVQSGMKLEQVAKESTHEWVSNKKSTTKKKSSAAKKSPAQSAVASKKQPAKKKVPQA
IDGLLRKGKKQAMPSGIIPMLATLTDNSFDDKNWIFEIKYDGYRALSYINDSEVTIMSRK
DLSFNKKFPPVAEALKQLELEAILDGEIVALNEEGRSDFQLLQQWQKNGEGELVYYVFDL
LWLNGYNLMHLPLVERKEILQQILPEHPMIRYSDHIEQKGRQFFEVANKQGLEGIMAKER
DSAYTPKIRTRQWLKIKTVQRQEVVIAGFTETRGSRSHFGALVLGVYEKDKLIYVGHTGS
GFTEKSLAAVYKKLQPLIIDKSPFATKPKTNMPCTWIKPVLVGEVKFSEWTKDNILRQPI
FVGLREDKNAKDVHKENAVHNSTAVEEGEAETRSTKKQSSQKMPTKKAAKSSKPKAKSKI
QNRKMEANDKRVARSVNITSEKTLLNDSDKEQVVTIDKKELTFTNLDKIYWPADKYTKRD
LINYYDQMAAFILPYLKDRPQSMNRHPNGIDKPGFYQKDVSGGKVADWLEKHDYLSESDG
ETKQYLVCTDEASLLYMANLGCIEMNPWHSTTKKPENPSWCVIDLDPGNISFDKVIEAAQ
VIKQLTDELGIDTYCKTSGSTGLHIYIPLAAAYDYDQSRQLAELIVTMAYNEMPSFTSLE
RSPAKRKNKIYLDYLQNRTIQTIAAPYSLRPKPGATASAPLHWEEVKKGLAIQDFTIENM
YSRAKEVGDIFKPVLGKGINLKKVLTKINSMQSK
NT seq 2805 nt NT seq  +upstreamnt  +downstreamnt
atgagtcttgctacttataaaaagaaacggtcgtttaaccagacaccggaaccggagggt
aaaaaaccagccggtaaaaagacagcagtttccagccaactgcattttgttgttcagaaa
cacgacgccacccggttgcattatgacttccggttggagatggaaggcgtactgaagtca
tgggccgttcctaaagggccttcgatgaacccggccgacaaacggctggccatgatggtg
gaagaccatccctacgattataaagactttgaaggcatcattcccgaaggcaattatggc
gctggtaccgtcatcgtttgggatgaaggcacctacgagcctatagagccttttgacgat
ccgaaaaaagcagaaaaacatttactggaacaattgcgcaagggctcgctgaagatcgtt
ttacacggacagaaattaaaaggcgaattcgccctggtgcaaataaaaagcagcgaagac
aatgcctggctgcttataaagcataacgacaaatacgccacccaaacagatgttaccaag
aaagcgaagtcggtgcagtcgggaatgaagttagaacaggtggccaaagaaagcacccat
gaatgggtaagcaataagaaatctaccacaaagaaaaaaagcagcgccgctaaaaaatca
cctgcccaatcagcggtggcgtcaaaaaaacaacccgctaaaaaaaaagtcccacaggca
atagacgggttactcagaaaaggtaaaaagcaggccatgccatcgggtatcattcccatg
ctggccacccttaccgataattcgtttgatgacaaaaactggatcttcgagataaaatac
gatgggtatcgtgccctttcctacatcaatgacagcgaggttaccattatgtcgagaaag
gacctttcgttcaataaaaagtttccgcctgttgcagaagcgttgaaacaactggaactg
gaagccatactggatggtgagatcgttgccctgaacgaggaaggcagaagtgattttcaa
ttgcttcagcaatggcaaaagaatggcgaaggagaactggtatattacgtgttcgacctg
ttatggttgaatggatataacctgatgcatcttccattggttgaacgcaaggagatcctg
cagcaaatactaccggaacatccgatgatccggtacagcgatcatattgagcaaaaaggc
aggcagttttttgaagtggctaataaacagggcctggaaggtattatggccaaagaacgt
gacagtgcctatacacccaagatccgcacacggcaatggttaaagatcaaaacggtgcaa
cggcaggaagtagtgattgcaggctttacagaaacccggggaagccgcagccattttggc
gcccttgtattgggcgtatatgaaaaagataaactgatctatgtaggccataccggttcg
ggctttaccgaaaaatcgctggctgcggtttataaaaaacttcaaccactgataattgac
aaatcgccttttgctaccaaacccaaaaccaatatgccctgcacctggataaaaccggtg
ctggtgggtgaggtaaaattttctgaatggacgaaagacaatattctgcgccaacccatc
tttgtgggtttgcgggaagacaagaacgccaaagacgttcataaagaaaatgcagtacac
aattctacagccgtagaagaaggcgaagctgaaaccagatccaccaaaaaacaaagttcc
caaaagatgccaacgaagaaagcagctaaaagcagtaagcctaaagctaaaagcaaaata
caaaacagaaaaatggaagctaatgacaaacgtgtggccaggtctgtaaatattacatcc
gaaaaaactttgttgaacgattctgataaagaacaggttgttaccatcgataaaaaagaa
ctgacgtttaccaatctggataaaatatactggccggctgataaatacaccaaacgcgac
ctgattaattattacgaccaaatggcggcttttatccttccttatttgaaggataggccg
caatcgatgaaccggcatcccaatggtattgacaagcccggcttttatcaaaaagatgta
agcggcggcaaagtggccgactggctggagaaacacgattacctgagtgaatcggatggt
gaaacaaaacaatacctggtttgcaccgatgaagcgtccctgctttatatggccaacctg
ggttgtattgaaatgaacccctggcacagcaccacaaaaaaaccagagaacccaagctgg
tgtgttattgacctggaccccggcaatatttcattcgacaaagttatagaagccgcccag
gtaattaaacaacttacagacgagttaggcatagatacgtattgcaaaacatccggctca
acgggtttgcatatttatattccgctggctgcagcgtatgactacgaccagtcgaggcag
ttagcagaattaatagttacgatggcgtataatgaaatgccgtcctttaccagcctggaa
cgcagcccggccaaaaggaaaaacaagatctatctcgattatttacaaaaccgaaccata
caaaccatagcagccccttactccttacgccccaaaccgggcgccacagcctcggcgcct
ttgcattgggaagaagttaaaaaaggattggccattcaggattttactatcgaaaatatg
tatagccgggctaaagaggtgggcgatatctttaaacccgtattggggaaaggcattaat
ctgaaaaaagtactcactaagatcaacagcatgcagagcaaatag

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