Niastella koreensis: Niako_3643
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Entry
Niako_3643 CDS
T01679
Name
(GenBank) FG-GAP repeat protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nko
Niastella koreensis
Brite
KEGG Orthology (KO) [BR:
nko00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Niako_3643
Enzymes [BR:
nko01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Niako_3643
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
AEV99941
UniProt:
G8TPU7
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Position
complement(4594560..4596446)
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AA seq
628 aa
AA seq
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MNKVFIYLITLFLPATIFAQRQMEYLNRGIVAVPDGKGHVFVSWRMLATDADNIAFNLYR
TAENKVTKLNSKPVTAVTSWLDEKADGNQTCTYQVAAIVNGKEIKDDRTYTLKAGAPAYI
SIPLKTPAGYAPNDASVGDLDGDGTYEIILHQAGKGKDNSQNGITDPPIFQAYTLEGKLL
WEINLGRNIREGAHYTQFMVYDLDGDGRAEIAMKTADGTIDGQGKVIGDSTKNYVNNNGR
ILEGPEYLTIFDGRTGAALYTTDYVPARGRIDGWGGTGGNGRNDSYGNRVDRFLACVAYL
DGVHPSLVMCRGYYGRSVLAAWDWKDNKLTQRWVFDTEKGYPDFAGQGNHNLTVTDVDGD
GKDEIIYGQMTVDDNGKGLYTTGIGHADALHVTDLDPDRPGKEVFSTQERFDDAGANFRD
AKTGEVIWKKASVKAGEDGEGPGRACALDIDPRYKGYECWVAGAGITGLFDCKGNKIAEK
TPPCNMGIYWDGDVLSEILNGTLVGKWDYNNSTVTKLFDGKDYDCVHNNGTKSNPCLSAD
ILGDWREEVIYRTRDNQELRIFSTTIPTTYKFYTLMQDPQYRLSIVWQNVAYNQPPHPGF
YFGEGMNAPPHPSISIIEQHKNDNAKNK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagtatttatttatctcataaccctgttcctgccggcgacgatctttgctcaa
agacaaatggaatatctcaacagaggtattgttgccgtgcccgatggaaaaggacatgtt
tttgtaagctggcgcatgctggccaccgatgcggataatatcgcttttaacctgtaccgc
acagcagaaaacaaggtcactaaattgaactcaaaacccgtaaccgcagttacctcctgg
ctcgatgaaaaagcagacggtaatcaaacctgcacttaccaggtagcagccattgtgaat
ggcaaagaaataaaggacgatcgtacttatactttgaaggccggtgcgcctgcctatatt
tctattcctttaaaaacgcctgccggttatgcgcctaacgacgccagtgttggcgacctg
gatggcgatggaacctatgagatcattttacaccaggcaggtaaaggaaaagacaactca
caaaacggcatcactgatccgcccatctttcaggcctatacgctggaaggaaaattactg
tgggagatcaacctgggccgcaacattcgcgagggagcgcattacacccagttcatggtg
tatgacctcgatggcgatggccgcgctgagattgccatgaaaacagccgatggcactatt
gacggccagggaaaagtaattggcgactccacaaagaactatgtaaacaacaatggccgc
attctcgaaggccctgaatacctcaccatttttgatggccgtaccggcgccgccttgtat
accaccgattatgtaccggcacgtggccgtattgatggttggggtggaaccgggggcaat
ggccgtaatgacagctatggcaaccgcgtagaccgtttcctggcctgtgtggcctacctg
gatggcgtgcatcccagcctggtgatgtgccgtgggtattatggccgcagtgtgctggcc
gcctgggattggaaagacaataaactcacccagcgttgggtatttgatacagaaaagggc
taccccgactttgctggtcagggcaaccataatttaacagtaaccgatgtggatggcgat
ggcaaagatgagattatttacgggcaaatgaccgttgatgacaatggcaagggcctgtac
acaaccggtatcggtcatgccgatgcgttacatgtaaccgacctggaccccgacagaccc
ggcaaggaagtgttcagtacccaggaacgttttgacgatgccggtgcaaactttcgcgat
gccaaaaccggtgaagtgatctggaaaaaggcttcggtgaaagccggtgaagatggcgag
ggacccggccgcgcatgcgccctggatattgatccccgctataaagggtatgaatgctgg
gtagccggtgcgggcattaccgggttgtttgattgcaagggaaacaagatagccgaaaaa
acaccaccctgtaacatgggcatctattgggatggcgatgtgttgagcgagatcctgaat
ggtaccctggtaggtaaatgggattataacaacagcacggttaccaaactgttcgatggc
aaggattatgattgtgtgcacaataatggcaccaaatccaacccttgtttgtcggccgat
atcctgggcgactggcgcgaagaagtgatctaccgcacccgcgataaccaggagttgcgc
attttctccactaccattcccactacttataaattctataccttgatgcaggacccgcaa
taccggctcagcatcgtttggcagaatgtagcgtacaatcagccgccgcatccgggattt
tatttcggtgagggtatgaacgcaccaccgcatccatcgatcagtatcattgaacaacat
aaaaacgacaatgcaaaaaataaatag
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