Nomascus leucogenys (northern white-cheeked gibbon): 100588939
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Entry
100588939 CDS
T03265
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100588939 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nle03019
]
100588939 (EDC4)
Messenger RNA biogenesis [BR:
nle03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100588939 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
100588939 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Motif
Other DBs
NCBI-GeneID:
100588939
NCBI-ProteinID:
XP_030650995
Ensembl:
ENSNLEG00000004932
LinkDB
All DBs
Position
2:complement(52326375..52337838)
Genome browser
AA seq
1401 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDGTS
TNKTGLRTMPPINLQEKQVICLSGDDSSTCVGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHSTWPVDVSQIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPDVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGHACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDNLGADGTHGTGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHTA
HEDFTFGESRPELGSEGLGSAAHSSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFMT
PSASLQQITASPSSSSSGSSSSSSSSSSSLTAVSAMSSTSAVDPSLTRPPEELTLSPKLQ
LDGSLTMSSSGSLQASPRGLLPGLLPAPADKLTPKGSGQVPTAASALSLELQEVEPLGLP
QASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSMASAASALHLLS
PRPRPGPELGPQLGLDGGPGDGDRHSTPSLLEAALTQEASTPDSQVWPTAPDITRETCSN
LAESPRNGLQEKHKSLAFHRPPYHLLQQRDSQDASAEQSDHDDEVASLASASGGFGTKVP
APRLPAKDWKTKGSPRTSPKLKRKSKKDDGDAAMGSRLTEHQVAEPPEDWPALIWQQQRE
LAELRHSQEELLQRLCTQLEGLQSTVTGHVERALETRHEQEQRRLERALAEGQQRGGQLQ
EQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPMAGQLSNSVATKLTAVEGS
MKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDS
FRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAATVASSVRAEV
QHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPSAHLD
CQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVLLS
LIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNS
LGKAARRLSLMLHGLVTPSLP
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatcctc
aagctggaccggcccgcgggcggccccagtgcagagagcccacggccatccagtgcctac
aatggggacctcaatggacttctggtcccagaccctctctgctcaggtgatggtacctca
acaaacaagactggtcttcggaccatgccacccattaacctgcaagagaagcaggtcatc
tgtctctcaggagatgatagctccacctgcgttgggattttggccaaggaggtggagatt
gtggccagcagtgactctagcatttcaagcaaggcccggggaagcaacaaggtgaaaatt
cagcctgtcgccaagtatgactgggagcagaagtactactatggcaacctgattgctgtg
tctaactccttcttggcctatgccattcgggctgccaacaatggctctgccatggtgcgg
gtgatcagtgtcagcacttcggagcggaccttgctcaagggcttcacaggcagtgtggct
gatctggctttcgcgcacctcaactctccacagctggcctgcctggatgaggcaggcaac
ctgttcgtgtggcgcttggctctggttaatggcaaaattcaagaagagatcttggtccat
atccggcagccagagggcacgccactgaaccactttcgcaggatcatctggtgccccttc
atccctgaggagagcgaggactgctgtgaggagagcagcccaacagtggccctgctgcat
gaagaccgggctgaggtgtgggacctggacatgctccgctccagccacagcacctggcct
gtggatgtcagccagatcaagcagggcttcattgtggtaaaaggtcatagcacgtgcctc
agtgaaggagccctctctcctgatgggactgtgctggctactgcgagccatgatggctat
gtcaagttctggcagatctacattgaggggcaagatgagccaaggtgtctgcacgagtgg
aagcctcatgatgggcggcccctctcctgcctcctgttctgtgacaaccataagaaacaa
gaccctgatgtccctttctggaggttccttattactggtgctgaccagaaccgagagcta
aagatgtggtgtacagtatcctggacctgcctgcagactattcgcttctccccagatatc
ttcagctcagtgagtgtgccccctagcctcaaggtttgcttggacctctcagcagaatac
ctgattctcagcgatgtgcaacggaaggtcctgtatgtgatggagctgctgcaaaaccag
gaggagggccatgcctgcttcagctccatctcggagttcctgctcacccaccctgtgctg
agcttcggtatccaggttgtgagtcgctgccggctacggcacactgaggtgctgcctgcc
gaagaggaaaatgacaacttgggtgctgatggtacccatggaaccggtgccatggagtct
gcggccggtgtgctcatcaagctcttttgtgtgcatactaaggcactgcaagatgtgcag
atccgtttccagccacagctgaaccctgatgtggtggccccactgcccacccacactgcc
catgaggactttacatttggagagtctcggcccgaactgggctccgagggcctggggtca
gccgctcacagctcccagcctgacctccgacgaatcgtggagctgcctgcacccgccgac
ttcctcagcctgagcagtgagaccaagcccaagttgatgacacctgacgccttcatgaca
cctagcgcctccttgcagcagatcactgcctctcccagcagcagcagcagcggtagcagc
agcagcagcagcagtagcagcagctcccttacagctgtgtctgccatgagcagcacctca
gctgtggacccctccttgaccaggccacctgaggagttgaccttgagccccaagctgcag
ctggatggcagcctgacaatgagcagcagtggcagccttcaggcaagcccgcgcggcctc
ctgcctggcctgctcccagccccagctgacaaactgactcccaaggggtcgggccaggtg
cctactgccgcctctgcactgtccctggagctgcaggaagtggagcccctggggctaccc
caagcctcccctagccgcacccgttcccctgatgtcatctcctcagcttccactgccctg
tcccaggacatccctgagattgcgtctgaggccctgtcccgtggttttggctcctctgca
ccagagggccttgagccagacagtatggcttcagccgcctcggcactgcacctgctgtcc
ccacggccccggccagggcccgagctcggcccccagcttggccttgatggaggccctggg
gacggagatcggcatagtaccccctccctcctggaggcagccttgacccaggaggcctcg
actcctgacagtcaggtttggcccacggcacctgacattactcgtgagacctgcagcaac
ctggcagaaagccccaggaatggccttcaggaaaagcacaagagcctggccttccaccga
ccaccatatcacctgctgcagcaacgtgacagccaggatgccagtgctgaacaaagtgac
catgatgatgaggtggccagccttgcctctgcttcaggaggctttggcaccaaagttcct
gctccacggctgcctgccaaggactggaagaccaagggatcccctcgaacctcacccaag
ctcaagaggaaaagcaagaaggatgatggggatgcagccatgggatcccggctcacagag
caccaggtggcagagccccctgaggactggccagcactaatttggcaacagcagagagag
ctggcagagctgcggcacagccaagaagagctgctgcagcgtctgtgtactcaactcgaa
ggcctgcagagcacagtcacaggccacgtagaacgtgcccttgagacccggcatgagcag
gaacagcggcggctggagcgagcactggctgaggggcagcagcggggagggcagctgcag
gagcagctgacacaacagttgtcccaagcactgtcttcagctgtagctgggcggctagag
cgcagcatacgggatgagatcaagaagacagtccctccatgtgtctcaaggagtctggag
cctatggcaggccaactgagcaactcagtggctaccaagctcacagctgtggagggcagc
atgaaagagaacatctccaagctgctcaagtccaagaacttgactgatgccatcgcccga
gcagctgcagacacattacaggggccgatgcaggctgcctaccgggaagccttccagagt
gtggtgctgccggcctttgagaagagctgccaggccatgttccagcaaatcaatgatagc
ttccggctggggacacaggaatacttgcagcagctagaaagccacatgaagagccggaag
gcacgagaacaggaggccagggagcctgtgctggcccagctgcggggcctggtcagcaca
ctgcagagtgccactgagcagatggcagccaccgtggccagcagtgttcgggctgaggtg
cagcaccagctgcatgtggctgtgggcagcctgcaggagtccattttagcacaggtacag
cgcatcgttaagggtgaggtgagtgtggcgctcaaggagcagcaggccgccgtcacctcc
agcatcatgcaggccatgcgctcagctgctggcacacctgtcccctctgcccaccttgac
tgccaggcccagcaagcccatatcctgcagctgctgcagcagggccacctcaatcaggcc
ttccagcaggcgctgacagctgctgacctgaacctggtgctgtatgtgtgtgaaactgtg
gacccagcccaggtttttgggcagccaccctgcccactctcccagcctgtgctcctttcc
ctcatccagcagctggcatctgaccttggcactcgaactgacctcaagctcagctacctg
gaagaggccgtgatgcacctggaccacagtgaccccatcactcgggaccacatgggctcc
gttatggcccaggtgcgccaaaagctttttcagttcctgcaggctgagccacacaactca
cttggcaaagcagcccggcgtctcagcctcatgctgcatggcctcgtgacccccagcctc
ccttag
DBGET
integrated database retrieval system
