Nomascus leucogenys (northern white-cheeked gibbon): 100600178
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Entry
100600178 CDS
T03265
Symbol
COL19A1
Name
(RefSeq) collagen alpha-1(XIX) chain
KO
K24340
collagen type XIX alpha
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100600178 (COL19A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nle00536
]
100600178 (COL19A1)
Glycosaminoglycan binding proteins [BR:
nle00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100600178 (COL19A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
100600178
NCBI-ProteinID:
XP_030660183
Ensembl:
ENSNLEG00000000613
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All DBs
Position
3:complement(59814866..60143971)
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AA seq
1142 aa
AA seq
DB search
MRLTGPWKLWLWMSIFLLPASTSVTIRDKTEESCPILRIEGHQLTYDNINKLEVSGFDLG
DSFSLRRAFCESDKTCFKLGSALLIRDTIKIFPKGLPEEYSVAAMFRVRRNAKKERWFLW
QVLNQQNIPQISIVVDGGKKVVEFMFQATEGDVLNYIFRNRELRPLFDRQWHKLGISIQS
QVISLYMDCNLIARRQTDEKDTVDFHGRTVIATRASDGKPVDIELHQLQIYCSANLIAQE
TCCEISDTKCPEQDGFGNIASSSVTAHASKMSSYLPAKQELKDQCQCIPNKGEAGLPGAP
GSPGQKGDKGELGENGLHGVPGLPGQKGEQGFEGSKGGTGEKGEQGEKGDPGLAGFNGEN
GLKGDLGPRGPPGPKGEKGDTGPPGPPALPGPLGIQGPQGPPGKEGQRGRRGKTGPPGKP
GPPGPPGPPGIQGIHQTLGGYYNKDNKGNDEHEAGGLKGDKGETGLPGFPGSVGPKGQKG
EPGESFTKGEKGDRGEPGIIGSQGVKGEPGDPGSPGLMGSPGLKGQQGSAGSTGPRGPPG
DVGLPGEHGIPGKQGIKGEKGDPGGIIGPPGLPGPKGEAGPPGRSLPGEPGLDGSPGAPG
PRGPKGERGLPGVHGSPGDIGPPGVGIPGRTGSQGPPGEPGIQGPRGLPGLPGTPGTPGN
DGVPGRDGKPGLPGPPGDPIALPLLGDIGALLKNFCGNCQGSVPGLKSNKGEEGGAGEPG
KYDSMARKGDTGPRGPPGIPGREGPKGSKGERGYPGIPGEKGDEGLQGIPGIPGAPGPTG
PPGLLGRTGHAGPAGAKGEKGSDGLPGKPGPPGPPGIPFNEGNGMSSLYKIKGGVNVPSY
PGPPGPPGPKGDPGPVGEPGAMGLPGLEGFPGVKGDRGPAGPPGIAGMSGKPGAPGPPGV
PGEPGERGPVGDIGFPGPEGPSGKPGINGKDGIPGAQGIMGKPGDRGPKGERGDQGIPGD
RGSQGERGKPGLTGMKGAIGPMGPPGNKGSMGSPGHQGPPGSPGTPGIPADAVSFEEIKK
YINQEVLRIFEERMAVFLSQLKLPAAMLAAQAHGRPGPPGKDGLPGPPGDPGPQGYRGQK
GERGEPGIGLPGSPGLPGTSALGLPGSPGAPGPQGPPGPSGRCNPEDCLYPVSHAHQRTG
GK
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgagactcactggcccttggaaactttggctttggatgtcaatattcctgcttcctgct
tccacttccgtgaccattagggacaagacagaagagtcatgccctatcctgagaatagag
ggacatcagctgacatatgacaacataaacaaacttgaagtttcaggttttgatctagga
gacagcttttctctaagacgtgcattttgtgaaagtgataaaacctgtttcaaattggga
agtgcacttcttattcgagacactattaagatatttcccaaaggccttcctgaggagtac
tcagtagctgccatgtttcgagtacgaagaaacgccaaaaaggaacggtggtttctgtgg
caggttttaaaccagcagaatattccacagatttctatagtagttgatggtggaaagaag
gtggtggaatttatgtttcaagccacagagggagatgtgttgaactacatttttagaaat
cgagaactccgtcctttgtttgatcgtcagtggcacaaacttggcattagtatacaatcc
caggtcatttcactttatatggattgtaatttaattgcgaggaggcagactgatgaaaag
gacactgtggatttccatggacggacagttattgctacgcgagcttcagatggcaagcct
gtggatattgaacttcaccaacttcaaatctactgcagtgcaaacctcatagctcaagaa
acatgttgtgaaatatcagatactaagtgcccagagcaggatggctttggaaatattgca
tcatcatcggtaactgctcatgccagtaaaatgtcttcatatctgccagcaaagcaggaa
cttaaagaccagtgccagtgcattccaaacaagggagaagcaggattaccaggagctccg
ggttcacctgggcagaaaggggataaaggagagctgggtgaaaatggtttacatggtgtt
ccaggattacctggtcaaaagggagagcaaggttttgaaggcagcaaaggaggaactggt
gaaaagggtgaacaaggagaaaaaggagatccaggtctggctggctttaatggagaaaat
ggtttgaaaggtgacttgggtcctcgtggtccacctggcccaaaaggagaaaagggagat
acaggacccccaggaccaccagccttacctggtcccctggggatacaaggcccccaaggt
ccacctggaaaagagggtcaaaggggaagacgagggaaaacaggacctcccggaaaacca
ggacccccaggaccacctggacctcctggaatacaaggaatacaccaaactcttggtgga
tattataacaaggataacaagggaaatgatgaacatgaagctggaggcctgaaaggagac
aagggtgagactggactaccaggatttccagggtctgttggccctaaaggacaaaaagga
gaacctggagagtcttttacaaaaggagaaaaaggagatagaggagaacctgggataata
ggatcacagggagtaaagggtgaacctggagatcctggatcccctggtttaatgggaagt
ccaggactaaagggtcagcaaggatctgcaggctccacgggacccagaggaccgccagga
gatgttggattgccaggagaacatggtatcccaggaaaacaaggcattaaaggagaaaag
ggagatccgggtgggatcataggccctcccgggcttccaggtccaaaaggtgaggctggt
cctccagggagaagcctgccaggggaaccaggattagatggaagtcctggagcacctggt
ccacgtggaccaaagggtgaaagaggacttccaggtgttcacggttccccaggggacata
ggcccaccaggggtaggaattcctggtagaacagggtcccaaggaccacctggagagcca
ggtattcagggtcctcgaggtctccctgggttgccaggaactccagggactccagggaat
gatggagttccagggagagatggaaagccaggcctgccaggccccccaggtgacccgatt
gcacttcctctcttgggagacatcggtgctttgctcaagaatttctgtggcaactgccaa
ggcagtgtcccagggctgaaaagcaacaaaggagaagaaggaggcgctggtgagcctgga
aagtatgattccatggcccggaagggtgatacagggccacggggtcctccaggaatccca
ggaagagagggaccaaagggaagcaaaggagagcggggctaccctgggatacctggggag
aaaggcgatgagggtcttcaaggaattccaggcattccaggtgctcccggcccgactgga
ccccctggcttattgggaagaactggacatgctggtcccgcaggagcaaaaggtgaaaag
ggcagcgacggactccctgggaaacctggaccacctggaccacctggtattccatttaat
gaaggaaacggtatgagcagtttatataaaattaagggaggtgtgaatgttcccagttac
ccagggccacccggtcctcctggcccaaaaggcgatcctggcccagtgggagagcctggt
gcaatggggttgccaggattagaaggatttccaggtgtaaagggagatcgaggcccagca
ggtcccccaggaatagcagggatgtcgggaaaacctggtgccccagggcctccaggagtt
ccaggggaaccgggtgagagaggacctgtcggagatataggtttccctggaccagaagga
ccctcaggaaagccaggaataaatggaaaagatggaataccaggtgctcagggcatcatg
ggtaagcctggagacagaggccccaaaggagaacgtggtgatcaggggattccaggagac
agaggctcacaaggtgaacggggaaaaccaggccttacaggcatgaagggggccattggt
cctatgggtccaccaggaaacaagggctccatgggatcccctggccaccaaggccctccg
ggctctccaggcacccccggcattccggctgatgcagtttcatttgaagaaataaagaag
tatattaatcaagaggtcctaaggatttttgaagagaggatggctgtattcctatcccag
ctcaagctgccggcagcaatgttggctgcccaagctcatgggaggcctgggccaccaggg
aaggatgggttgcctgggccaccaggagaccctggaccccaaggctacagaggacagaag
ggagaaagaggtgaacctggaattgggctgccagggagtccaggtcttcctgggacttca
gctctgggtttgccaggctcaccaggtgccccaggcccccagggccccccaggacccagt
ggaagatgtaacccagaagattgcctctatcctgtgtctcatgcccatcagcggacaggt
gggaaatga
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