Nomascus leucogenys (northern white-cheeked gibbon): 100600607
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Entry
100600607 CDS
T03265
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
100600607 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nle03400
]
100600607 (LIG4)
Enzymes [BR:
nle01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
100600607 (LIG4)
DNA repair and recombination proteins [BR:
nle03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
100600607 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
100600607
NCBI-ProteinID:
XP_003270216
Ensembl:
ENSNLEG00000007888
UniProt:
G1R8S8
LinkDB
All DBs
Position
5:complement(134513432..134521533)
Genome browser
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFREFLDSWRKFHDALHKNQKEV
TDSFYPAMRLILPQLERERMAYGIKETMLAKFYIELLNLPRDGKDALKLLNYRTPTGTHG
DAGDFAMIAYFVLKPRCLQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLISQSSA
LEQKWLIRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTD
QFGASPTEGSLTPFIHNAFKTDIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLRKRYEILSNIFTPIPGRIEIVQKTQAHTKNEVIDALNE
AIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVSGLIDELDILIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGEKPSVFHTLSRVGSGYTMKELYDLGLKLAKYWKPFHKKAPPSSILC
GTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIEKIRDDKEWHECMTLDDLE
QLRGKASGKLASKHLYVGGDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLTNVNKISNIFE
DVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSKNIRVKNIIVSNKHDV
VKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFVNTDLNELKEVFSG
IKNSNEQTPEEMTSLIADLECRYSWDCCPLSMFRRHTVYLDLYAVINDLSTKNEGTRLAV
KALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKILKESWVTDSIDK
CELQEENQYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaacttcacaaactgttgcatctcatgttccttttgcagatttgtgt
tcaactttagaacgaatacagaaaagtaaaggacgtgcagaaaaaatcagacacttcagg
gaatttttagattcttggagaaaatttcatgatgctcttcataagaaccaaaaagaggtc
acagactctttttatccagcaatgagactaattcttcctcagctagaaagagagagaatg
gcctatggaattaaagaaactatgcttgctaagttttatattgagttgcttaatttacct
agagacggaaaagatgccctcaaacttttaaactacagaacacccactggaactcatgga
gatgctggagactttgcaatgattgcatattttgtgttgaagccaagatgtttacagaaa
ggaagtttaaccatacagcaagtaaacgaccttttagactcaattgccagcaataattct
gctaaaagaaaagacctaataaaaaagagccttcttcaacttataagtcagagttcagca
cttgagcaaaagtggcttatacggatgatcataaaggatttaaagcttggtgttagtcag
caaactatcttttctgtttttcataatgatgctgctgagttgcataatgtcactactgat
ctggaaaaagtctgtaggcaactgcatgacccttctgtaggacttagtgatatttctatc
actttattttctgcctttaaaccaatgctagctgctattgcagatattgagcacattgag
aaggatatgaaacatcagagtttctacatagaaaccaagctagatggtgaacgtatgcaa
atgcacaaagatggagatgtatataaatacttctctcgaaatggatataactatactgat
cagtttggtgcttctcctacagaaggttctcttaccccattcattcataatgcattcaaa
acagatatacaaatctgtattcttgatggtgagatgatggcctataatcctaatacacaa
actttcatgcaaaagggaactaagtttgatattaaaagaatggtagaggattctgatcta
caaacttgttattgtgtttttgatgtattgatggttaataataaaaagctagggcatgag
actctgagaaagaggtatgagattctcagtaatatttttacaccaattccaggtagaata
gaaatagtgcagaaaacacaagctcatactaagaatgaggtaattgatgcattgaatgaa
gcaatagataaaagagaagagggaattatgataaaacaacctctatccatctacaagcca
gacaaaagaggtgaagggtggttaaaaattaaaccagagtatgtcagtggactaatagat
gaattggacattttaattgttggaggatattggggtaaaggatcacggggtggaatgatg
tctcattttttgtgtgcagtagcagagaagccccctcctggtgagaagccatctgtgttt
catactctctctcgtgttggctctggctacaccatgaaagaactgtatgatctgggtttg
aaattggccaagtattggaagccttttcataaaaaagctccaccaagtagcattttatgt
ggaacagagaagccagaagtgtacattgaaccttgtaattctgtcattgttcagattaag
gcagcagagatcgtacccagtgatatgtataaaactggctgcaccttgcgttttccacga
attgaaaagataagagatgacaaagagtggcatgagtgcatgaccctggacgacctagaa
caacttagggggaaagcatctggtaagctcgcatctaaacacctttatgtaggtggtgat
gatgaaccacaagaaaaaaagcggaaagctgccccaaagatgaagaaagttattggaatt
attgagcacttaaaagcacctaaccttaccaacgttaacaaaatttctaatatatttgaa
gatgtagagttttgtgttatgagtggaacagatagccagccaaagcctgacctggagaac
agaattgcagaatttggtggttatatagtacaaaatccaggcccagacacgtactgtgta
attgcagggtctaagaacatcagagtgaaaaacataattgtgtcaaataaacatgatgtt
gtcaagcctgcatggcttttagaatgttttaagaccaaaagctttgtgccatggcagcct
cgctttatgattcatatgtgcccatcaaccaaagaacattttgcccgtgaatatgattgc
tatggtgatagttatttcgttaatacagacttgaacgaactgaaggaagtattctcagga
attaaaaattctaatgagcagactcctgaagaaatgacttctctgattgctgatttagaa
tgtcggtattcctgggattgctgtcctctcagtatgtttcgacgccacaccgtttatttg
gacttgtatgctgttattaatgacctgagtaccaaaaatgaggggacaaggttagctgtt
aaagccttggagcttcggtttcatggagcaaaagtagtttcttgtttagctgagggagtg
tctcatgtaatcattggggaagatcatagtcgtgttgcagattttaaagcttttagaaga
acgtttaagaggaagtttaaaatcctaaaagaaagttgggtcactgattcaatagacaag
tgtgaattacaagaagaaaaccagtatttgatttaa
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