Nomascus leucogenys (northern white-cheeked gibbon): 100602806
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Entry
100602806 CDS
T03265
Symbol
COL24A1
Name
(RefSeq) collagen alpha-1(XXIV) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle04820
Cytoskeleton in muscle cells
nle04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100602806 (COL24A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100602806 (COL24A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nle00536
]
100602806 (COL24A1)
Glycosaminoglycan binding proteins [BR:
nle00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100602806 (COL24A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
100602806
NCBI-ProteinID:
XP_030679516
Ensembl:
ENSNLEG00000010050
LinkDB
All DBs
Position
12:88142652..88543309
Genome browser
AA seq
1772 aa
AA seq
DB search
MPGMDISHLRVLSMVFGYLFSVLSSLGLYPHMSGYVWTVADVKLKIWLLVLVVTRQRERE
SISVIDLYQSISHQLSYIGTFMKPLLHFIVLCVAGVVVCAQEQGIDILHQLGLGGKDVRR
SSSATAVPSSSTPLPQGVHLTESGVIFKNDAYIETPFVKILPVNLGQPFTILTGLRSHRV
NNAFLFSIRNKNRLQLGVQLLPKKLVVHIRGTQPVVFNYSVHDEEWHSFAITIRNQSVSM
FVECGKKYFSTETIPEVQTFDSNSVFTLGSMNNNSVHFEGIVCQLDIIPSAEASADYCRY
VKQQCRQADKYQPETSLPCTTLTPTKIPEHSPTPKRFAEKVLSECKSIPNIIKNDSETVY
KRQEHQISRSQLSSLQSGNVSAVELTNLGIQAKEMITEEDTQTNVSLSGTPHRISGARTN
TKEKFSSLLNMSDNTTQHADRVTGLSLFKKMPSILPQIKQDTITNLKKSITANLHTNELM
EMQTILNTSLYRVTNEPSVDNHLDLRKEGEFYPDATYPIENSYETELYDDYYYEDLNTML
EMEYLRGPKGDTGPPGPPGPAGIPGPSGKRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFS
PGQAVPGQKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLRGEQGIPGFAGNIGSLGYPGRQ
GLAGPEGNPGPKGARGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPA
GLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGMKGDKGEQGTA
GELGEPGYPGDKGAVGLPGPPGMRGKPGPSGQTGDPGLQGPSGPPGPEGFPGDIGIPGQN
GPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQKGYAGEPGPEGLKGEV
GDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVTGYPGPPGVPGPI
GPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGET
GNPGERGVQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGTEGPPGIEGESGLQ
GEPGAKGDVGPAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGKGLPGEDGEKGEM
GSPGIIGPLGRSGQMGLPGPEGIAGIPGQRGRPGRKGDKGQIGPTGEVGSRGPPGKIGKS
GPKGARGARGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGP
PGPRGEPGPVGEQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGERGLKGERGS
EGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGS
PGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQSGIQGKRGHRGAQGDQGPCGE
PGLKGQPGEYGVQGLTGFQGFPGPKGPGGDAGIVGISGPKGPVGHRGNTGPLGREGIIGP
TGRTGPRGEKGFRGETGLQGPRGQPGPPGPPGAPGPRKQMDINAAIQALIESNTALQMES
YQNTEVTLIDHSEEILKTLNYLSNLLHSIKNPLGTRDNPARICKDLLNCEQKVSDGKYWI
DPNLGCPSDAIEVFCNFSAGGQTCLPPVSVTKLEFGVGKVQMNFLHLLSSEATHIITIHC
LNTPRWTSTQTSGPGLPIGFKGWNGQTFKVNSLLEPKVLSDDCKIEDGSWHKATFLFHTQ
EPNQLPVVEVQKLPHLKTERKYYIESSFVCFL
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgcctggaatggatattagtcatttacgtgttctgagtatggtctttggatatctattt
tctgtcttatcctctttaggcctttatcctcacatgtctggttatgtttggactgttgct
gatgtcaaactgaaaatttggctattagttttggttgtaactagacaaagagaaagagaa
tctatttcagtcattgatctctaccagtccattagtcatcagctttcatacatcggtaca
tttatgaaaccacttcttcattttattgtactatgtgtggctggggttgttgtttgtgca
caagaacaaggcatagatattcttcatcaactaggccttggaggcaaagacgtaagacgc
tcatcatcagcgactgctgtaccatcatcatctacaccattacctcagggggtccattta
acagaatcaggagtcatttttaaaaatgatgcttatattgagacacctttcgtgaaaatt
ttaccagtcaacttagggcagccgtttacaatattaactgggttacggtcacatcgggtg
aacaatgcatttctcttcagcattagaaataaaaatagactgcaattaggagtacaatta
ctacctaaaaaattagtagtacacattagaggaacgcagcctgtagttttcaactacagt
gttcatgatgaggaatggcactcatttgccattactattagaaaccaaagtgtctcaatg
tttgttgagtgtggaaagaaatattttagcacagagactattccagaagttcagaccttt
gattctaatagtgtgtttactttaggaagtatgaataataattctgtccattttgaagga
atagtatgtcagttagatattattccttctgcagaagcatctgcagactactgcagatat
gtgaaacagcagtgtcgccaagcagacaaatatcaacctgaaacaagccttccttgtaca
actctcacaccaactaagataccggaacactctcccacgcccaaacgatttgccgaaaaa
gtactgtcagaatgcaaaagcattccaaatatcataaaaaatgattctgaaaccgtgtat
aaaagacaagaacaccagatatcaagatctcagttatcttctcttcagtcaggaaatgtc
tctgctgtggagctcacaaaccttgggattcaggccaaagaaatgatcactgaggaagat
actcagacaaatgtaagcctgtcagggacccctcatcgcatcagtggggcaagaacgaat
accaaggagaaatttagttctctcctaaacatgtctgacaataccacacaacatgctgat
agagtaactggtctgtcactgtttaagaagatgccatctattcttccacaaataaaacaa
gatacaattactaatctcaagaagtctatcacagcaaatctacacactaacgaactcatg
gaaatgcaaacgattttaaacacaagcttgtatagagtgacaaatgagccatctgtggat
aatcaccttgatctgaggaaagaaggtgaattttatcctgatgctacttatcccatcgaa
aatagctatgaaactgagctttatgatgattattattatgaggatctgaatacaatgctt
gaaatggagtatctgagagggccaaaaggagacactggacctcccggtccacctggtcca
gcaggtatcccaggtccgtcagggaagagaggtccacggggcataccagggccacatgga
aatcctgggttacctggattacctggtccaaagggccccaaaggagatccaggattttcc
ccaggtcaagctgttcccggacaaaagggtgatcaaggcctttctggattaatgggcccc
cctggtatgcaaggtgataagggtctcaaagggcatcctggactcccaggacttcgaggt
gaacaaggaattccaggatttgctggtaatattggttcactcggctaccctggcaggcag
ggtttagctggaccagaaggtaatccaggtcctaaaggtgcacgaggttttattggctct
cctggagaagcgggacaactgggacctgaaggagaaagaggcattcctgggatccgtgga
aagaagggttttaaggggagacagggttttccaggtgactttggagacagaggccctgct
ggtcttgatggcagtcctggacttgtaggtggcactggtcctccggggtttcctgggctt
agaggcagtgttggccctgtgggaccaattggacctgctggaattcctggcccaatgggc
ctttcagggaataaaggactacctggaatgaaaggtgataagggtgaacaaggcacagca
ggagagctaggagaaccagggtatcctggagacaagggtgctgttggtttgccaggacca
ccagggatgagaggaaagccagggccttcaggccaaacaggtgacccaggactccaagga
ccatctggccctccaggaccagagggttttccaggagatattgggattcctggacaaaac
ggccctgaaggaccaaagggactccttggaaacagaggacctcctggacctcctggtctc
aaaggaactcagggagaagaaggaccaattggaccctttggggaactggggccaagagga
aaaccaggtcaaaaggggtatgcaggtgaaccaggaccagaaggcttaaagggagaagta
ggagatcaaggaaatattggaaaaattggtgaaacaggacctgttggcttacctggagaa
gttgggatgactggaagcattggcgaaaagggagaacgtggaagtccaggcccactaggt
ccccagggagaaaaaggtgttacgggatatccaggtcctcctggggttccaggacctatc
ggtccattgggattacctggtcacgtgggggcaagaggaccacctgggagtcaaggtcct
aaaggacaaagaggaccaagaggaccagatggtctcttaggggaacaaggtatacaaggt
gccaagggtgaaaaaggagatcaaggaaaaagagggcctcatggtcttattggtgagact
ggaaaccctggagaaagaggagttcaagggaaaccaggtttacagggattgcctggaagt
acaggtgacagaggacttccaggagagccaggactgcgaggactgcaaggtgatgttgga
cctcctggagaaatgggcacggagggacctccaggcattgagggagagtctggtctccaa
ggtgaaccaggtgcaaagggagacgttggacctgcaggcagtgttggaggaactggggaa
ccaggtttacggggtgaaccaggagctcctggagaagaaggtctccaaggaaaagatggg
ttaaagggagtgccaggaggaaagggacttcctggagaggatggagaaaaaggagagatg
ggctcaccaggaattatagggcccttgggtagatcaggccaaatgggccttccgggacct
gaaggaattgcgggaattccagggcaaagaggtcgtccgggaagaaagggtgataaagga
caaataggacccacaggagaagttggaagcagaggtcctcctggaaaaattgggaaaagt
ggtcctaagggtgccagaggagctagaggtgctgtgggacatttaggattgatgggacct
gatggagaaccaggaattccagggtacaggggccatcagggtcaaccaggaccctctgga
ttgccaggacctaaaggagaaaagggctacccaggagaagatagcacagtcctaggacca
cctgggcctcgaggtgaaccaggtccagtgggggaacaaggagaaagaggagagcctgga
gcagagggatataagggccatgtgggtgtaccaggactaagaggtgccactggacaacaa
ggacccccaggcgaaccaggtgaccagggtgaacgaggactaaaaggagagagaggatct
gaaggtaataaggggaaaaaaggagctcctggtccttctgggaaacctgggattcctgga
cttcaaggcctacttgggccaaaaggcatacaaggataccatggagcagatggcatttca
gggaaccctggaaaaatcgggccaccgggaaaacagggacttcctggcatcagaggcagc
ccaggaagaacaggtcttgctggggctccaggtcctccaggagtaaagggttcatcaggc
ttgccaggaagcccaggaattcaaggcccaaagggtgaacaagggctacctggtcaatct
ggaattcaaggtaaaagaggtcaccgaggagcacaaggtgatcaaggaccatgtggagag
cctggcctgaaagggcagcctggagaatatggtgttcaaggtttgacaggtttccaagga
ttcccaggccctaaaggtcctggaggggatgctggcattgttgggatatcaggtcctaaa
ggtcctgttggacacagaggaaacactggtccccttggcagagaaggtataataggccca
acagggagaactggacccagaggtgaaaagggctttagaggtgaaactggtcttcaagga
ccgagaggtcaaccagggcctccaggtccacctggagcaccaggcccaagaaagcaaatg
gatatcaatgctgctattcaagccttgattgaatcaaataccgccctacagatggagagc
taccagaatactgaagtgactttaattgaccacagtgaagagatactcaaaaccctgaac
taccttagcaatttattgcacagcatcaagaatcctcttggcacacgagataacccagca
cgaatctgcaaagatttacttaactgtgaacaaaaagtatcagatggaaaatactggatt
gatccaaatctcggctgtccttcagatgccattgaggttttctgcaatttcagtgctggt
ggtcagacatgcttacctcctgtttctgtaacaaagttggagtttggagttgggaaagtc
cagatgaacttccttcatttactgagttcggaagccacccatatcatcaccattcactgt
ctaaacaccccaaggtggacaagcacacaaacaagtggcccaggattgcctattggtttc
aagggatggaatggccagacttttaaagtaaacagtctacttgaacctaaagtgctttca
gatgactgcaagattgaagatggcagctggcataaggcaacatttctttttcacacccag
gaacctaatcaacttccagtggttgaagtacaaaagcttcctcatctcaaaactgaacga
aagtattacattgaaagcagttttgtatgctttctataa
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integrated database retrieval system
