Nomascus leucogenys (northern white-cheeked gibbon): 100604365
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Entry
100604365 CDS
T03265
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100604365 (COL17A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
DUF2868
Motif
Other DBs
NCBI-GeneID:
100604365
NCBI-ProteinID:
XP_003255482
Ensembl:
ENSNLEG00000015299
UniProt:
G1RZC4
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Position
3:29542662..29598012
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AA seq
1497 aa
AA seq
DB search
MDVTKKNKRDGTEVTERIVTETVTTRLTSLPPKGGTSNGYAKTGSLGGGSRLEKQSLIHG
SSGYINSTGSTRGHASTSSYRRAHSPASTLPNSPGSTFERKTHVTHHAYEGSSSGNSSPE
YPRKEFASSSTRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASVSPTRNSS
NTLPIPKKGTVETKIVTASSQSVSGTYDATILDANIPSHVWSSTLPAGSSMGTYHNNMTT
QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSVFGMQNNLAPSSTTLSHGTTT
TSTAYGVKKNMPQSPATVNTGVSTSAACTTSAQSDDLLHKDCKFLILEKDNTPAKKEMEL
LIMTKDSGKVFTASPASIAATSFSEDTLKKEKQAAYNADSGLKAEANGDLTTVSTKGKTT
TADIHSYGSGGGGGSGGGGGVGGAGGGPWGAAPAWCPCGSCCSWWKWLLGLLLTWLLLLG
LLFGLIALAEEVRKLKARVDELERIRRSMLPYGDSMDRIQKDRLQGMPPVAGADLDKTGL
HSDSQEELWMFVRKKLMMEQENGNLRGSPGPKGDMGSPGPKGDRGFPGTPGIPGPLGHPG
PEGPKGQKGSMGDPGMEGPMGQRGREGPMGPRGEPGPPGSGEKGERGAAGEPGPHGPPGV
PGSVGPKGSSGSAGPQGPPGPVGLQGLRGEVGLPGVKGDKGPMGPPGPKGDQGEKGPRGL
TGEPGMRGLPGAVGEPGAKGAMGPAGPDGHQGPRGEQGLTGMPGIRGPPGPSGDPGKPGL
TGPQGPQGLPGTPGRPGIKGEPGAPGKIVTSEGSSMLTVPGPPGPPGAMGPPGPPGAPGP
AGPAGLPGQQEVLNLQGPPGPPGPRGPPGPSIPGPPGPRGPPGEGLPGPPGPPGSFPPNS
EAFLSGPPGPPGPPGPKGDQGPPGPRGHQGEQGLPGFSTSGSSSFGLNLQGPPGPPGPQG
PKGDKGDPGVPGALGIPSGPSEGGSSSTMYVSGPPGPPGPPGPPGSISSSGQEIQQYISE
YMQSDSIRSYLSGVQGPPGPPGPPGPVTTITGEAFDYSELASHVVSYLRTSGYGVSLFSS
SISSEDILAVLQRDDVRQYLRQYLKGPRGPPGPPGASGDGSLLSLDYAELSSRILSYMSS
SGISIGLPGPPGPPGLPGTSYEELLSLLRGSEFRGIVGPPGPPGPPGIPGNVWSSISVED
LSSYLHTAGLSSIPGPPGPPGPPGPRGPPGVSGALATYAAENSDSFRSELISYLTSPDVR
SFIVGPPGPPGPQGPPGDSRLLSTDASHSRGSSSSSHSSSVRRGSSYSSSMSTGGGGAGS
LGAGGAFGAAAGDGGPYGTDISPGGGYGAAAEGGMYGGNGGLFRADFAGGLDYNELAVRV
SESMQRQGLLQGMAYTVQGPPGRPGPQGPPGISKVFSAYSNVTADLMDFFRTYGAIQGPP
GQKGEMGTPGPKGDRGPAGPPGHPGPPGPRGHKGEKGDKGDQGYAGRRRRRSIAVKP
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaccaagaaaaacaaacgagatggtactgaagtcactgaaagaattgtcact
gaaacagtaaccacaagacttacatccttaccaccaaaaggtgggaccagcaatggctat
gctaaaacaggctctcttggtggagggagccggctggagaaacaaagcctgattcatggc
agcagcggctacataaactcaactggaagcacacgaggccatgcctccacctctagttac
aggagggctcactcacctgcctccactctgcccaactccccaggctcaacctttgaaagg
aaaactcacgttacccaccacgcctatgaagggagctccagtggcaactcttctccggaa
taccctcggaaggaatttgcatcttcttcaaccagaggacggagtcaaacacgagagagc
gaaattcgagttcgactgcagagtgcatccccatccacccgatggacagaattggatgat
gttaagcgtttgctcaaggggagtcgatcggcaagtgtgagccccacccggaattcctcc
aacacactccccatccccaagaaaggcactgtggagaccaaaattgtgacagcgagctcc
cagtcagtgtcaggcacctatgatgcaactatcctggatgccaacattccctcccatgtg
tggtcctccaccctgcccgcggggtcttccatggggacctatcacaacaacatgacaacc
cagagctcatccctcctcaacaccaatgcctactctgcgggatcagtcttcggagttcca
aataacatggcatcctgctcacccactttgcaccctggactcagcacatcctcctcagta
tttggcatgcagaacaatctggcccccagctcgactaccctgtcccatggcaccaccact
acttccacagcatatggggtgaagaaaaacatgccccagagccctgcgactgtgaacact
ggtgtttccacctctgccgcctgcaccacaagtgcgcagagtgatgaccttttgcacaag
gactgcaagttcctgatcctagagaaagacaacacacctgccaaaaaggagatggagctg
ctgatcatgaccaaggacagcgggaaggtctttacggcctcccccgccagcatcgctgca
acttctttttcagaagacaccctaaaaaaagaaaagcaagctgcctacaatgctgactca
ggcctaaaagccgaagctaatggagacctgacgactgtgtccacaaagggcaagaccacc
actgcagatatccacagttacggcagcggtggtggtggtggcagtggaggaggtggcggt
gttggtggcgctggcggcggcccttggggagcagcgccagcctggtgcccctgcggctcc
tgctgcagctggtggaagtggctgctgggcctgctgctcacctggctgctacttctgggg
ctgcttttcggcctcattgctctggcggaggaggtgaggaagctgaaggctcgtgtggat
gagctggagaggatcaggaggagcatgctgccctatggggacagcatggatagaatccaa
aaggaccgcctccagggcatgccacctgtggcgggagcagacctggacaaaactgggctg
cacagcgacagccaggaggagctatggatgttcgtgaggaagaagctaatgatggaacag
gaaaatggaaatctccgaggaagccctggccctaaaggtgacatgggaagtccaggccct
aaaggagatcgagggttccctgggactccaggtatccctgggcccttgggccacccaggt
ccagaaggaccgaagggtcaaaaaggcagcatgggagatcctggcatggaaggccccatg
ggccagagagggcgagaaggccccatgggacctcgtggtgagccagggcctcctggatct
ggagagaaaggggaaagaggggctgctggtgaaccaggtcctcatggcccacctggtgtc
ccaggttctgtgggtcccaaaggttctagtggctctgctggcccacagggccctccaggt
cctgtaggtctccaagggctccgaggtgaagtgggacttcctggtgtcaaaggtgacaaa
ggaccgatgggaccaccaggacccaaaggtgaccagggtgagaaaggacctcgaggcctc
acaggcgagcctggcatgagaggtttgcctggtgctgttggtgagcccggggctaaagga
gcaatgggtcctgctggcccagacggacaccaaggcccaagaggtgaacaaggtcttaca
gggatgcctggaatccgtggcccaccaggaccttctggagacccaggaaagccaggtctc
acaggaccccagggacctcagggacttcccggtacccctggccgaccaggaataaaaggt
gaaccaggagctccaggcaagatcgtgacttcagaggggtcgtcgatgctcactgtccca
ggccccccaggacctcctggagccatgggacccccaggacctccaggtgccccaggccct
gccggcccggctggtctcccaggacagcaagaggttcttaatttacaaggtcccccaggc
ccacccggcccacgcgggccaccagggccttccattccaggcccaccaggaccccgaggc
ccaccaggggagggtttgccaggcccaccaggcccaccaggatcgttcccgcccaactca
gaagccttcctctctggccccccaggcccacctggccccccaggtcccaagggagaccaa
ggtcccccaggccccagaggacaccaaggcgagcaaggccttccaggtttctcaacctca
gggtccagttctttcggactcaaccttcagggaccaccaggcccacctggcccccaggga
cccaaaggtgacaaaggtgatccaggtgttccaggggctcttggcattcctagcggtcct
tctgaagggggatcatcaagtactatgtacgtgtcaggcccaccagggccccctgggccc
cctgggcctccgggctctatcagcagctctggccaggagattcagcagtacatctctgag
tacatgcagagtgacagtattagatcttacctatccggagttcagggtcccccaggccca
cctggtcccccaggacctgtcaccaccatcacaggcgaggctttcgactactcagagctg
gcaagccacgttgtgagctacttacggacttcggggtacggcgtcagcttgttctcgtcc
tccatctcttctgaagacatcctggctgtgctgcagcgggatgacgtgcgtcagtaccta
cgtcagtacctgaagggccctcggggtccgccagggccaccaggagccagtggagatggg
tccctcctgtctttggactatgcagagctgagtagtcgcattctcagctacatgtcaagt
tctgggatcagcattgggcttcctggtcccccggggccccctggcttgccaggaacctcc
tatgaggagctcctctccttgctgcgagggtctgaattcagaggcatcgttggaccccca
ggtcccccgggtccaccagggatcccaggcaatgtgtggtccagcatcagcgtggaggac
ctctcgtcttacttacatactgccggcttgtcatccatcccaggccctccaggacctcct
ggtcctccagggcctcgaggacccccgggcgtctcaggagccctggcaacctatgcagct
gaaaacagcgacagcttccggagcgagttgatcagctacctcacaagtcctgatgtgcgc
agcttcattgttggccccccaggccctcctgggccgcagggaccccctggggacagccgc
ctcctgtccacggatgcctcccacagtcggggtagcagctcctcctcacacagctcatcc
gtcaggcggggcagctcctacagctcttccatgagcacaggaggaggtggtgcaggctcc
ctgggggcaggtggtgcctttggtgcagctgcaggagacgggggcccctatggcactgac
atcagcccaggcggaggctatggggcagcagcagaaggcggcatgtatggtggcaacggc
ggtctattcagggctgactttgctggaggtctggattacaacgagctggctgtgagggtg
tcagagagcatgcagcgtcagggcctactgcaagggatggcctacactgtccagggccca
ccaggccggcctgggccgcaggggccacccggcatcagcaaggtcttctctgcctacagc
aacgtgactgcagacctcatggacttcttccgaacttatggagccattcaaggaccccct
gggcaaaaaggagagatgggcactccaggacccaaaggtgacaggggccctgctgggcca
ccaggtcatcctgggccacctggccctcgagggcacaagggggaaaaaggagacaaaggt
gaccaaggctatgctgggcggagaaggagaagaagtattgctgtcaagccataa
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