Neodiprion lecontei (redheaded pine sawfly): 107222030
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Entry
107222030 CDS
T09006
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107222030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107222030
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107222030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ZapB
YabA
LPP
TSC22
Motif
Other DBs
NCBI-GeneID:
107222030
NCBI-ProteinID:
XP_046595990
EnsemblRapid:
ENSNLCG00000011392
LinkDB
All DBs
Position
1:complement(31003570..31014554)
Genome browser
AA seq
2412 aa
AA seq
DB search
METIEENPHNVLGSILNEEELTHIPKGVSEKLKSYFDERFEEFITAKAVFETARKNLEQK
LETLQKDYNEQKLDLEECKGKLELANKYTNELQTKVDETRSEATRLQESLRRLEKDNGEL
RRQRDVATDERDALQLQVERRDAELERTHAELQMLSTQLQTAVTAKCQALADTEEIRSRE
MSLDYKEQRLEKERTLLSQQMANLEEELSRRTGELQNVRTESSKRSLLTETQLSQREEEL
RIANDEISKLREGNSLIIKRCDEMAQKLEEQRAHELSMHASYREEVNAQTRLADLYKGMA
DEANAKAEEFSSAVKELQSLLEQATEQYGVLETQHNDLQIRIDEEVAEKSQKIEELVKEL
ERANDLLKDAKQEMLDHAVEQLAPTAAVASRLLKKGSSLTQIYTQLVDATNELAIEKEEN
ERLKSQMNIILRELEDKAPVLQQQRDDYEAAVANVTMLTSRLDDLLAENHRLQESADEAS
RIANHHVRENKRLKTELADLARQVCFLLKEVQESRGGSTVLSSTIMESDDLASSQIISKK
LVTFRDIEELQENNQKLLSIVRTLSARQEEIEKATDEINSGEMKEKLDRYVEQLSDMQAA
QDRQSKMLEGLLRQRDMYKNMYQQCLNQTSTNSRRESVTDEEKVEMEVDQKENERENKKK
EKEEKDKKIAELESKLKRLCDEYDTYRKERVAHERMLGEEIERLRKEAEASSARSCRLKS
QLDSANERFHLLQANVSSYKSQIKVLEEKCSNYNTTIGKHEQSIMILKDETLDAQARLSR
AEVQLENLRQERQLLRDSEGRLLKEREVLHRERQTQALLRADVEAIKASLERSQAEGQLR
AEQRLDDATSECAALRRRLQEEQDRFRELASHLERQLATSQQRLTEEREMVEKLRADLEA
AREVHIEDVRRIEDFSARLRQANAHSIAKPMIGDENTIKRLKELEIQLTSSQAEVRSLSE
QLKAAHQHSQQYCNIAESSESQLRELTAEQIKYKEGVEQHLQETQAVIASLKQQNQDLEG
ELSRIKSGCHETDSELRGKLNIAERQLEELGELRQELLTAQSDLQAASNAVKETEEKYAR
EMLLHSTDLQALARLKEESGAVTEKISHLTQERDSAIESLQIEKAAWHEREQRLNEEVHE
LQVRMKDLDAQNSLLHDQIQELSDRTAVIQSQQLNANCSISPDTSLEVMNRSFSGLEDDS
KSAEQLLRVMKYLRREKDLAVAKFDVLRAENLRLKSQAEALEKRMKEAETLLSSQREESE
IDVVTTSKHSELLRKVETLNAITDSNRILREERDSLLVQVSDLTTKVTALSAEVVPLRDK
VRELTSKTEALVQENNSLKAEATRWRQRANALVERANKASPEDWRRLQSERENLSKLLTS
ERETHAKQMDELNLLKVEKSKLEEQLIQQQRQIQSQSEQLSKSLEDIRKLNQDLSESLAN
SAAKLKEVTVLRKELTDKEVVLNDTKNKELKIRTIAKKYKTQFEELTKTLEEEKSKQTQL
QATGTAVQNVERENQLREEGRQELRQANLELSARTEELTRQLTAVQNETEALKKEVETLN
KASVEKEERAKQVLKGARTRIMQLTESKKVCEKELNDLKSKVESNSGESETSEHDARLAA
IKSQMEGRISRLEHEKTEVHAEKEALLQRVNQLQRQLSSSTGGVSVANEPPTANIKPMSA
RSETPLASIRPMTVVVQSRTAAVLRTTVAAPVLVAPQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQAVHTTETSSPTSSHSDYQPASTSSSSQTTTSN
LRQLAVQPQLSEPAESTQREDPESAEPLSLQQQQCQQQPQQQQQTVALVSPRVEQQQQQQ
QQQQQQQQQQQQQAVASVSDQQQTVASSSTPSVSTSQGTSGHKRPRSLDTSASGSSVAEG
GVEATKQEQSPSPKNKRSRQQEITPAPTASATDVEYQVPTSSQRDQDEEVEDGCVVVVDC
DEGEGGGTHQVQEEEEFDHETYEEMEEEEELPYGVEGEGEVDNNEVEIIMEDDSTSVEVP
RQVQPATTNNQQQQQSEAISSAGPTGEPPLPFVPRSSRGVAPMPRQQQQQHLLLPQQGYE
DGGDDSIVPSTPTLFVPRRGDGFGEAVSSPQVPQGRFTFGDPSPTVTATATPTLATPTGP
ARAIFGSSGSGVAQVVQEGMDDTRMDLTQLEDAGTGRSVPTTPLQVSPAAADVPPSTSSG
QSEEQEAPLSGVATATITATTDTSDESAIPSIRIVTVEQEAIQAEVTTETLELTPADVVT
SESEKQDEGGPSAGDDEVTEVEVEAEPAGAEVSTEEVEDEGREAEASPSCNTRSQKALAA
AANNNRVTARRSNRSPFRSSRGQRPTPIIWENQSGRGHNPIRGGPQSRGGVSEGRARGSR
GRRMRKFPYARF
NT seq
7239 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaatagaagaaaacccacacaacgtgctaggcagcatattgaatgaagaagaa
cttacacatattccaaagggtgtcagcgaaaagttgaaatcgtatttcgatgaacggttc
gaagaatttatcactgctaaagctgtttttgagactgccagaaaaaatctcgaacaaaaa
ttagagactctacaaaaggattacaatgagcagaaactggatttggaagaatgtaaaggc
aaactggaactggccaacaaatatacaaatgaacttcaaaccaaagttgatgaaactagg
tctgaagcaacaagattacaagaatcacttagaagattagaaaaggataacggagagctg
agacgtcaacgggatgtagccacagatgaaagagatgcattacaactacaggttgaacgt
cgagatgcagaacttgagcgtacacatgccgagctgcaaatgctcagtactcagctgcag
acagcggtgactgccaaatgtcaggctctggctgacactgaagagatccgcagtcgcgag
atgtctttagattacaaggaacagcgtctggagaaagagcgaacccttttatctcaacag
atggccaatttagaagaagagctatcaaggcgcactggagaactgcaaaatgttcgtact
gaatcgtccaagagatcactgttgacagaaacccaactttcacagcgtgaggaagaactg
cgaatagctaatgatgagattagtaaactccgcgaaggaaattccctcatcatcaaacgc
tgtgatgaaatggcacaaaaattagaagaacaaagagctcatgagctttcaatgcatgct
tcttatcgtgaggaagttaacgctcaaactagactagctgatctttataagggaatggca
gatgaagctaatgccaaggctgaagaatttagttcagctgttaaagaactacaatccctg
cttgaacaagccacagagcagtacggtgtgcttgaaacacagcacaatgatctacaaata
cgaattgatgaagaggtcgctgaaaagtcacaaaaaatcgaggagcttgtaaaagagctg
gaacgagcgaatgatttactgaaggacgccaaacaagaaatgttagaccacgcagtggag
caactggctccaacagcagcagtagcaagtaggctgttgaaaaaaggctccagcctgacc
caaatttatacccaattggttgatgctaccaacgaactggcaattgagaaagaagaaaat
gagcgattaaagtcacaaatgaatataatactccgtgaacttgaagataaggcaccggta
ctgcaacaacagcgtgacgattacgaagccgcagttgccaatgttacaatgctcacttcg
cgtcttgatgaccttcttgctgaaaatcatcgtttgcaagaatctgcagatgaggcttcg
cgcattgctaaccaccatgttcgggaaaataaacggctaaagacagagcttgcggatctt
gctagacaggtctgtttccttcttaaagaagtccaggagagtcgtggaggttcgacagtc
ctctcttccacaataatggagtctgacgacctagcatcttctcaaattatcagcaaaaag
ttggttacctttagagatattgaagaattacaggaaaacaatcaaaaattgttatcaatt
gtcagaacattatctgcaagacaagaagaaattgaaaaggcaactgatgaaattaattct
ggggagatgaaagaaaaacttgataggtatgtagaacaactatctgacatgcaagcggcg
caggaccgacaatcaaagatgcttgaaggtttgttaagacaaagggatatgtacaagaat
atgtatcagcagtgtctgaatcagacctcaaccaatagtcgccgagagtctgttacagac
gaggagaaggtggaaatggaggtagatcaaaaggaaaatgaaagagaaaataagaagaaa
gaaaaagaagaaaaagataaaaaaatagctgaattggaatctaagctaaaacgactgtgt
gacgagtatgatacatatagaaaagaacgagttgcgcatgaacgaatgttaggtgaagaa
attgagagattgagaaaagaggcagaggccagttctgcacgcagttgccgattgaaatcg
caattggattctgctaatgagcgattccatcttctacaggccaatgtcagctcatacaaa
tcccaaattaaagttcttgaggaaaaatgcagtaactacaatacaacaattggaaaacat
gaacagagtataatgatattgaaagacgaaactttagatgcacaagctcgtctgtcacga
gctgaggtgcaattagaaaacctacgacaagaaaggcaattattgcgagattcagaggga
cgcctgttaaaagagcgggaggtattgcacagagagagacaaacgcaagcattgctacga
gcagatgtggaagctattaaagccagtttggaacgttctcaagcagagggtcaattacga
gcagaacagcgtctcgatgacgctactagcgagtgtgcagctttacgtagaagacttcaa
gaagaacaagatcgatttcgtgaattagcatctcacttagaacgccagttggctacctca
cagcaacggctcacagaagaacgtgagatggtcgagaaattacgagcggaccttgaagct
gctcgcgaagttcacattgaagatgtacgacgtattgaagattttagtgctagacttaga
caagctaacgcacattcaatagccaaacccatgattggagatgaaaatacgatcaagcga
ttaaaggaacttgagattcaacttacaagtagtcaagcagaagtcagatcactctcagaa
cagttgaaagcagcccaccaacacagccaacagtattgtaatatagctgaaagctctgaa
agccagctccgagagttgacggcggaacaaatcaaatacaaggaaggagttgaacaacat
cttcaggaaacgcaggctgtaatagcatcacttaaacagcaaaatcaagacttagaaggc
gaacttagtcgtattaaatcaggatgccatgaaacagactcagaattacgtggaaagcta
aatattgctgaaagacaattggaagaacttggggaattgagacaagagttgcttacagct
caaagtgatctacaagctgcatcaaatgctgtcaaagaaactgaagaaaaatatgctaga
gaaatgctcctgcactccaccgacttgcaggcactcgcgcgactaaaagaagaatcaggt
gctgttacagagaaaatctctcatcttacccaagaacgggactccgcaattgaatcacta
caaattgagaaggctgcctggcatgaaagagaacaacggttaaatgaggaagttcatgag
ttacaagtcagaatgaaagatttggacgcacaaaactccttgttgcatgatcaaatacaa
gagctaagtgatcggacggctgttatccaaagtcaacagttgaacgcaaattgctccata
agccctgataccagtttagaagtaatgaatcgtagcttcagtggacttgaagatgattct
aaatcagcggaacagctcttaagagtaatgaaatatcttagaagagaaaaggatttggct
gttgcaaagtttgacgttctgagagcggaaaacttaagactcaagtcacaggctgaggca
ttggagaaacgaatgaaggaagcagagacattgctcagctcacaacgtgaagaatcggaa
attgatgttgtaacaacttcaaagcattctgaactattacgcaaagttgaaacgctcaat
gctatcacggattcgaatcgtatccttagagaagagcgagatagtctactggttcaagta
tcagatctgactacaaaagtaacagcactttcggccgaagtggtaccacttcgtgacaaa
gttcgagaattaacatctaaaactgaagcgctggtacaagagaataacagcctcaaagca
gaagctactagatggcgtcaacgagccaatgctcttgtagaaagagccaataaagcaagt
cccgaggactggcgacgtttgcaaagtgaacgagaaaatcttagtaaactgctgacttct
gagcgtgaaacgcatgcaaaacaaatggatgaattgaatttactgaaggtcgagaaatcc
aaacttgaagaacaactgatccaacagcaacgtcagattcaatctcagagcgaacaatta
tccaagagcctagaggatatccgaaagcttaatcaagacttgagcgaatcacttgctaac
tcagctgcaaaattgaaagaagtaacagtactgcgtaaagaactcacagacaaagaagtt
gtactgaatgataccaaaaataaagaattgaagatccgtacaatcgcaaagaaatacaag
acacaatttgaagaactaactaagacgcttgaggaagagaaatctaaacagacacaatta
caagcaactggaacagctgtgcaaaatgtggaacgtgaaaatcaattgagggaagagggg
aggcaagagctgcgtcaggcaaatcttgaattatccgctcgtactgaggaactgactcgc
caattgacggctgtacaaaatgaaacagaagccctgaaaaaagaagtggaaacattaaac
aaggccagtgttgaaaaggaagagcgtgcaaaacaagtactcaaaggcgcgagaacgaga
atcatgcaactgacagaatcgaaaaaggtttgtgaaaaagaattgaacgatttaaagtct
aaagttgaatctaattcaggggaatccgaaacttctgaacacgatgcgagactagctgcc
ataaaatctcaaatggaaggaagaatttcacgtctagaacatgagaagactgaagtgcat
gctgaaaaagaagctcttctccaacgagttaatcaattgcaaagacaattgtcatctagt
actggtggagtcagtgttgcaaatgaaccaccaacagctaacattaagcccatgtcagca
cgttcggaaactcctctcgcaagcattcgtcctatgaccgttgtggtacaatctaggact
gcagctgttttacgcacaactgtagcagcccctgttttagtagcacctcaacaacaacaa
caacagcagcagcagcagcagcagcagcagcagcaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacagcagcagcagcagcagcaacag
cagcaacaacaacaacaacaacaggctgttcacactactgaaactagctcacctaccagc
agtcactctgactatcaaccagccagtacgagcagttcgtcccagaccaccactagcaat
ttgcggcaactagcagttcagccgcaactcagcgaaccagcagaatccactcagcgggaa
gacccagaaagtgcagaacctttaagccttcagcagcagcaatgccaacaacaacctcaa
cagcagcaacaaactgtagcgttggttagtccgagagtcgaacagcagcagcaacaacaa
cagcaacaacaacagcaacaacaacagcagcagcaacaagctgtggccagtgttagtgat
cagcaacaaacagtagcgagcagctcaacaccatcagtgagcacttcgcaaggtaccagc
ggccataaacgtcctagaagtcttgatacctcagcatccggatcaagtgttgccgaaggt
ggtgtagaggctacaaaacaagaacaaagtccaagcccaaaaaataagcgaagcaggcag
caagaaataacacccgcacccactgccagtgccactgacgtcgagtatcaggtacctacg
tcaagccaacgtgatcaagatgaagaagtagaagatgggtgtgtggttgtagttgattgt
gacgaaggtgagggaggtggaactcatcaggttcaagaggaagaagaatttgaccatgaa
acatacgaggaaatggaagaggaagaagaattaccatatggagttgagggtgaaggagaa
gtggacaataatgaagtagaaataataatggaggacgactctactagcgttgaagtaccc
cgacaagttcaacctgcaactactaacaatcagcaacaacaacagtcagaagccatcagc
agtgctggtcctactggagagccacctttaccatttgtaccaagatcctctcgtggtgta
gctccgatgccaaggcaacagcagcaacaacatctactcttgcctcaacaggggtatgaa
gatggtggtgacgacagtatagtaccaagcaccccaacgctatttgtacctcgccgagga
gatgggtttggagaagctgtcagctctccccaggtaccgcaaggtcggtttactttcggc
gatccttcacctactgttactgcaacagcaacaccaacattagctactcccactggacca
gcaagagctatttttggctcctcaggctctggggtcgctcaagtagtacaagaaggaatg
gatgatacacgaatggatctgactcaacttgaagatgctggaacaggacgaagcgtgcct
actactccgttacaagtgtctccagctgctgctgatgtaccaccttcgacaagcagtggg
cagtcagaagaacaagaagcccctctatctggagttgccacagctacgataacagcaaca
actgacaccagtgatgaatcagcaattcctagtattcgaattgtaacagtagaacaagaa
gcgatccaagcagaagttacgactgaaactcttgagttgacacctgctgacgtagtgact
tcagaaagtgaaaaacaagatgagggtggtccaagtgcaggggatgatgaggttaccgaa
gtagaagttgaggcggaaccagcaggtgctgaagttagtaccgaagaagtagaagatgaa
ggtcgggaggctgaagcctctccgtcatgtaacacacgttcacagaaggcattagctgca
gcagcaaacaataacagagttacggcacgtcgttctaatcgatctccattccgctcgtct
cgaggacaacggccaacacccattatctgggaaaatcagtctggtcgagggcacaatcca
ataagaggagggccacaatcaagaggtggggttagcgaaggtagagcacgaggttccaga
ggacggcgtatgcgaaaatttccgtatgcccgcttttaa
DBGET
integrated database retrieval system
