Nomia melanderi (Alkali bee): 116424913
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Entry
116424913 CDS
T07404
Name
(RefSeq) RING finger protein nhl-1 isoform X1
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
nmea
Nomia melanderi (Alkali bee)
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmea03019
]
116424913
04121 Ubiquitin system [BR:
nmea04121
]
116424913
Enzymes [BR:
nmea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116424913
Messenger RNA biogenesis [BR:
nmea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116424913
Ubiquitin system [BR:
nmea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116424913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF5128
SGL
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
Phytase-like
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
116424913
NCBI-ProteinID:
XP_031827761
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MEQFEQLLTCAICLDRYRNPKLLPCQHSFCMEPCMDGLVDYVRRQVKCPECRAEHRIPYQ
GVQAFPTNVTLQRFLELHIEITGELPDPTSGQTMERCGVCSEKSYCSLCVHCEKKCCPEC
KDAHMDILRREITRINSQIRRGLHRLQDALALVEKNTLGLQTNCASVAEEVDEIYRRLSK
ALKDRTEHLRNEVDRYLSTELRGLIQLKENLELEIANIQSNCDLAEAHINENVPWDDSEL
LDTKELFLRTVEFIRNFEYEAGDYSRRVRFVMAHDPNQLVLHVAGYGELNIKPETGSGGL
LGSSSSLAPPGGSPGLMRSKSDHRLASQYRQQEEERLARNRYVPEYDSRIHSYDAPEYEV
PRNKSRYRSRFMRHRDGDDSDGDTRSTVRFTSTPQESSGLRERVLDTEDAARGPLSGIFR
LTDSPRVMRKLQEYERAGKRKKEEPAPHPVQQPPPPKPQVQVRKVPTAMARQTSEDDEIS
RIKKQNKTAAAPATETVEERPPAQTPAPAHPPPREPPPEREPEEPARRPITSRRTSTDTH
TPATRSASSDSSTGSESSGGSGIRSTGAPFTAEEMKQKYLSRAPASNTTTSASQGQVGPM
PGKDSGSALPASRSFQSRFLGTGNRAAPPPPTQTSTPREDSSMKKKEEEEDEDEETSSSS
EETESETEEESENEAHPSTTAPSTTPSAVQDRQRNEQAMARTDIGPLLARSAEARRGSKE
DSPSTRFLNKSRSQAAMMARERERERERERERERERERERERERERERERERERERERER
ERERERERERERERDADNEVESPLSARSRYAALKERRQRLARSRSSHNFGGDDLDLDEEP
PSPTTQSPNAYLAAKYGAGSELARSRSTHALKSREPSPERDRPGAEKDGAALSSWARYLK
NKYGNRTIKDKEPSSSTSAIPSASSSAASRRLSLGLPLRHGGQTSFESSDDDQKNPSGSP
TSPTAAPVIPAAAGSSTSNGRRSHYLLKRRQLFKFGMRGSEAGCFTWPRGLAVGPDNSIV
VADSSNHRVQVFDCNGNFMKEFGSYGSGEGEFDCLAGVAVNRIGQYIIADRYNHRIQVLD
PSGRFLRAFGSQGTADGRFNYPWGITTDALGFIYVCDKENHRVQVFQSDGTFVGKFGSCG
SGRGQLEHPHYIAVSNTNRVIVSDGNNHRIQIFDVNGRVLTSFGSEGSDEGQFKFPRGVA
VDDQGYIVVADSGNNRIQIFSPEGAFLKSFGGWGSGDGEFKGLEGVAVTSTGNIVVCDRE
NHRVQVF
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggagcagttcgagcaactgctaacgtgcgcgatatgcctggaccgatacaggaacccg
aagcttttgccatgccagcacagcttttgcatggaaccctgcatggatggcctcgttgac
tacgtgcgtcgacaggtcaagtgtccggaatgcagggcggaacatcgtataccttatcaa
ggcgtgcaggcgttcccgaccaacgtgaccctgcagcgattcctggaattgcacatcgag
atcaccggcgagctgccggacccgaccagcggccagacgatggaacggtgcggcgtttgt
tcggagaaaagctactgctcgctctgcgtacactgtgagaaaaagtgttgccccgagtgc
aaggacgctcacatggacatcctcaggcgtgaaattacgcgcatcaattctcagatacgc
agggggctgcacaggctgcaggacgcgttggcgctggtggaaaagaacacgctgggtctg
caaacgaactgcgcctcggtcgccgaagaggtggacgagatttatcggaggctgagcaag
gctttgaaggaccgcacggaacatctgcgtaacgaggtcgatcgatacctgagcaccgag
ctcagaggcctgatccagctcaaagagaatctcgaattggagatcgcgaacatccagagc
aactgcgacctggccgaggctcacatcaacgagaacgttccttgggacgattccgaactt
ctcgacacaaaggagctgttcctgcgcaccgtggagttcatcaggaacttcgagtacgag
gccggggattacagtcggcgggtgcgtttcgtgatggcccacgaccctaaccagctggtc
ctccatgtagcgggttacggcgagctgaatattaagccggagaccggaagcggaggattg
ctgggtagttcgagcagtctagcgcctcccggaggatcgccgggcctcatgagaagcaag
agcgaccatcgtctggcttcgcagtacaggcagcaggaggaggagaggctagccagaaat
cgatacgtgcccgaatacgattctcgcattcacagttacgacgcgccggagtacgaggtg
ccacgcaacaaatcgaggtacaggagccggttcatgcgtcatcgggacggcgacgactct
gacggcgacacgaggtcgacggtcaggttcacgtcgacgcctcaggagtcctcgggtctg
cgcgaacgtgtcctggacacggaggacgcggcgcgaggcccgttgtccggcatattccgg
ctgacggactcgccgcgcgtcatgagaaagctgcaggagtacgagagggccgggaagagg
aagaaagaagagccagcgcctcaccccgtgcaacagcccccgccaccgaagcctcaggta
caggtcaggaaggtaccgaccgcgatggcgaggcagaccagcgaggacgacgagatttcc
aggatcaaaaagcagaacaaaaccgcggccgcacctgcgaccgagacggtggaagaacga
ccgccagcccagacacctgcaccggctcatccgccgcccagagaaccaccgccggaacga
gaaccggaggaaccagcgcgaagaccgatcacttcgaggcgaacttcgacggatacccac
actccggcgacgagaagcgcttcatcagactcgagcacgggctcggagagctccggcgga
tcaggaatccgcagcacgggcgcgccgttcaccgccgaggaaatgaagcagaaatacttg
tcgagagcaccggcctcgaacacgacaacctcggcctcgcagggacaagtcggcccgatg
cccggcaaggattccgggtccgccttgcccgcgtcccgatccttccagagtcgtttttta
ggcacaggtaaccgtgcagcaccaccaccgcccacgcaaacctcgacgccgcgggaagac
agctcgatgaagaagaaggaggaggaggaggacgaagacgaggagacgagcagctcctcg
gaggagacggaatccgagaccgaggaagaatcggaaaacgaagctcacccctcgaccacc
gcaccctcgactacaccttcggccgtacaggatcgtcagaggaacgagcaggccatggcg
cggacggacatcggtccgctgctagccaggagcgcggaagctaggcgaggtagcaaggaa
gactcaccatcgaccaggttcctgaacaagagcaggagccaagcggcgatgatggccagg
gagcgggaaagggagcgggagcgggaacgggaacgggaacgggagcgggagcgcgagcgg
gagcgggagcgggagcgcgaacgggaacgcgaacgggaacgggaacgggaacgagaacgc
gaaagagaaagagaacgcgagagagaacgagagcgcgaacgagacgcggacaacgaggtc
gagtcgccgctgtcggcgaggtcgcggtacgccgcgttgaaggaaagaagacaacggctg
gcgaggtcccgaagctcgcacaacttcggcggcgatgacctcgacctcgacgaggaacca
ccctcgccgacgacccagtcgccgaacgcctatctggcggccaagtacggagccggctct
gaattggccagaagtcggagcacccacgccctcaagtccagggagccgagccccgagcgc
gacaggcccggcgccgagaaagacggcgcggccctcagctcgtgggccaggtacctcaag
aacaagtacgggaatcgaacgatcaaggacaaggagccctcctcttccacctcggcgatt
ccatcagcgagcagcagcgcggcctcgagaaggttatctctcggactaccgctcaggcac
ggtggccagacgtccttcgaatcttccgatgacgaccaaaaaaacccgtcaggctccccc
acgtcccctacagcagctcccgttatacccgcggcagcaggttcctccactagcaatggc
cggaggagtcactatctgctgaagcggcggcagctgttcaagttcgggatgcgggggagc
gaagccggatgctttacctggccgagaggcctcgcggtcggcccggacaactccatcgtc
gtggccgacagctccaaccatcgtgttcaagtatttgactgcaacgggaacttcatgaag
gagttcggatcgtacggaagcggcgagggtgagttcgattgcctcgccggggtggccgtg
aacaggatcgggcagtacatcatcgcggatcgttacaaccacagaattcaggtgctcgat
ccgtccggccgttttctgagagcctttggttcccaaggaaccgccgatggtcggttcaat
tacccttggggaatcaccacggacgctcttggattcatttatgtgtgcgataaagagaac
catcgcgtacaggtatttcaatcggatggcacgttcgtggggaaattcggttcctgcgga
agcggacgtggccaattggaacatcctcactacatcgcggtgagcaacacgaaccgcgtg
atcgtcagcgacggaaacaaccatcggatacagatattcgacgtgaacggccgcgtgctg
acctccttcggatccgagggctccgacgagggtcagttcaagttcccaaggggcgtcgct
gtcgacgaccagggctacatcgtcgtcgccgactccggcaacaacaggatacagatattc
agcccagagggcgcgttcctcaagtccttcggcggctggggtagcggtgacggtgaattc
aagggcctagagggggttgctgtcacgtcgaccggtaacatcgtcgtctgcgaccgcgag
aatcaccgcgtccaagtgttctaa
DBGET
integrated database retrieval system
