Nomia melanderi (Alkali bee): 116434695
Help
Entry
116434695 CDS
T07404
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116434695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmea03019
]
116434695
03036 Chromosome and associated proteins [BR:
nmea03036
]
116434695
Messenger RNA biogenesis [BR:
nmea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116434695
Chromosome and associated proteins [BR:
nmea03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116434695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
116434695
NCBI-ProteinID:
XP_031849157
LinkDB
All DBs
Position
Unknown
AA seq
1902 aa
AA seq
DB search
MPSMFGQSGNTSFSGFNTAQQTSPFGQSAFGKPIATTSFGSGATPVFGSSNTSLFSSKPS
GSTAGGLFSNTTTPPAFTQPSFGGFGTTNTNTNLFGSQQNASTSLFGANTATSAFGQSNK
SAGFSFGATSGTNLFGQPQQTTPQATPFGQSNSTGNTNLFGATPGFGSTNNTNTGVIGTV
VKFNPVVTTDSMSKNGISHTISAKHCCIAAMKEYESKSYEELRFEDYSVGRKGPSTGLFG
TPAQPSPFVNAGAGTSTATTGFGGMSGGFGTTTQSGTSGLFGKPMTSFGTPSTTTTNSFA
FNSTPSTNLFGSNNQAKPFGTAAPTPLFATSNTNQTAGTGFGGLNTAQNTTFGSTFGATQ
PNQSIGLFNQNKSAFNVPSTSSSTGFTSFGQTPSGNAGTTLFGTKSAGTTGFGTAPTFGV
TTASTFGITTGFTAGQNSGTSLFNTCFKPAGQTSGFSFGSTSAPSAGLGTNTGLTLGSGS
TLFGQQKPGSLFGNTGNNTTFNSSSSFGSSTFGTNSNVGTGMGMGLLGAGASNNQAKSSG
TVPVHQQILALVSAPFGDSPLLKNLLPASGKTEELLKPANAPSKIMNGVQYKVTADNKSP
KIKAKVVTPAQLSKKSMFEGLEEEDPLSEAFQPRPNAKRLVLRPKSMANSIVSSPTENLQ
ATGKNSQSPEKGEGKTNGTDTDTVENRTIEAIDKENHSQDNNRQLANDRRSSSSWLKTSL
PRNSTTKHLEEESFDGQRSPHSSLNASPDEMMNNTVTELRPYAGVNSPKQMHTETNNSVD
TPVKNSSAADKSCTDAVTRNTGTSVKXXDTSFWTLQSPDWKTNAAKVTLKRAGYYTIPPL
DKLEDYVCGETCVVPNFTVGRENYGNVYFSDSFDIYGLNLDEIVHFRHKEVIIYPDDEKK
PPVGHGLNRKAQVTLDRVWPHDKSLHKPITDPHRLAAMDYEEKLRRVSAKHDTRFLEYRP
ETGSWVFKVDHFSKYGLSDSDEDDSGNVPTAIDLKRFKLSESFQKKAAATKLKQSYRPVR
YSNPLAKSARXRNHYFFSLLFPMFPLTKEKKISSSSSTVANGASNESKIENTVSPTSDNA
RILGTDSHKLQLMKASFFDGSDEEMNDICEQESALLVSGQKSSVVRCYIDSFETLDEEQR
QKMTYSPILRSNLTIHRTPSTVYEESIFPKTDSKLKPSMDIVTAKSSIYGRQFPDPVVIP
VTAILKWHSEVVPLSKSIINKLQSRCVADAGIHMGRMFKPSWGRGLTLLTLSTRGQADGV
PLHSSFEQIGSYVGGRIPEDPTSVAIVQRIQILGGSGTDEDRVEIFKRSVEGHLKIQLSH
RIMDQEGDCPIFLVDTDINKASMALHAHCSLAEEFADQFAADSFAAYVANVWKLCVALWG
TLPDVNVLTVNAADHNIVIARREAIGEWFRSVIQRGLDGLEGEKTMISNEERMLDLLSAA
ELQGACELAREAGDHCLALLMAQLRSGMPTKTLIKQQIALWQDSGVDENISTDRLKLFAL
VAGEPLISSKHGLINVCENLDWKRALAVHLWYLSSPVASIRDILELYEASFDATKTTDAY
AAAPIPEYRGAVDYELEANNGQSIYDLCYHLLKLFCIGNHTLGNLLNPATHTADPLDYRL
SWLMQQVLLALGYSHLAEHVAALTHINFATQLEAYGLWHWAIFVMLHLKDTGKRKAAVKN
LLQRHVEIDHIRDYIERETFLREELGIPSVWIHEAKAVKSYVAKRYGEAASYFIQAEQWN
TAHEIIIEHLAADAIINENYEYLRELLSPLIPSECSSTISGWSYQGELLWDYMEIAMDIE
SLLRGADPREISYKLELLKPRLTCLCLKINQFPCPTAKHRLCQAEIAKRTLHLGKSLLQA
NENRSTVILQLVSQLPLPEDYAQQELRPIVIMRVNEIISQAV
NT seq
5709 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcatgttcgggcaatctggaaatacatcgttcagtggtttcaatacagcgcaa
caaacgagtccattcggacaatccgcgtttggcaaaccgatcgcgacaacgagtttcggc
agtggtgcaacaccagtttttggtagcagtaacacttctttgttcagttcaaagccttcg
ggttctaccgcgggtggtctgttcagtaacactacgactccacctgcatttactcaacca
tcttttggaggtttcgggacaaccaatacaaacaccaatttatttggcagtcaacaaaat
gctagtacaagtttattcggagcaaatacagctacctcggcatttggacagtcaaacaaa
tcggccggatttagctttggcgcgacatcgggaacaaatttatttggacaacctcaacag
acgactccgcaggctacaccttttggacaaagtaacagcaccggaaataccaatttattc
ggtgcaacgcccggtttcggcagtacaaacaacaccaacaccggggttatcggcacagtt
gttaaatttaatcctgttgttactactgactctatgtcgaagaacggtatatctcatacc
atatcagcgaagcactgttgcatagcggcaatgaaggagtacgaatcgaaatcgtatgag
gaattacgtttcgaggactattctgtgggacgaaaaggacccagtacaggactattcggt
acacccgcgcagccttcaccttttgtcaatgcaggggcaggtactagtactgcgacgacg
ggcttcggtggaatgagcgggggtttcggaaccaccacacaatctggaacgagtggtctt
ttcggaaagcctatgacaagcttcggaacaccatcgacaacaactacgaatagcttcgcg
ttcaattctactccgagcacaaatttgttcggcagtaacaatcaggcgaaaccgtttggc
acagcagcaccaacgccactctttgcgaccagcaataccaaccaaactgctggtacaggc
ttcggtggccttaatacagctcagaatactacgtttggatctacgttcggagcgacacaa
ccgaatcagagtattggtttatttaatcagaataaatcggctttcaatgtgccgtccacg
tcatccagtaccgggttcaccagctttggtcaaacaccatccggcaatgcgggcacaacc
ttattcggtactaaatctgctggaacaacaggtttcggaacggcacccacttttggtgtg
actacagcatcgacttttggaattacaacaggtttcactgctggccaaaactctggtact
tcattgtttaatacatgttttaaacctgcaggacagacgtctggattctcttttggttct
acctccgcgccctcagccggactgggtacgaatacgggtttgacactgggtagtggttcc
actttgtttggacaacaaaagcctggaagtttattcggtaataccggcaacaacacgaca
ttcaattcttcgtcatcgttcggatcgtcgacctttggaactaattcgaacgtgggaact
ggcatgggaatgggtttactcggtgccggcgcgtcgaacaatcaagcgaaaagctctgga
accgtgccggtacaccagcagattttagcactagtatccgcaccattcggggattcgcca
ttattgaaaaatctcttgccggcttccggcaaaaccgaagagttattgaaacctgcgaat
gccccttctaaaataatgaatggcgtacagtacaaagtcacggcggacaacaagtctccg
aaaatcaaagctaaagtagttacaccggcacaattgtcaaagaaatccatgttcgaaggc
ctcgaagaggaggatcctctctcggaagcatttcagcctcgtccaaatgcaaagcgttta
gtattgcgtcctaaatccatggcgaactcgattgtgtcgtcgccgactgaaaatttacaa
gccaccggaaagaattcgcagtcccctgaaaagggggagggcaagacgaatggaacggat
acggataccgttgaaaatagaactatcgaagctatagacaaggaaaatcatagtcaagat
aacaaccggcagttggcgaacgatcgaagatcatcctcgtcttggttgaaaacgagcctt
ccacggaactcgacgaccaaacatttggaagaagagtcattcgacgggcagcgttcgcca
cattcgtcgttgaacgcatctccagacgaaatgatgaataacactgtaaccgaattaaga
ccgtatgccggcgttaattcgccgaagcagatgcacaccgaaaccaataattctgtggat
acgccggtaaagaattcctctgcagccgacaaatcctgtacagacgctgtaactcggaat
accggtacgagcgtgaaannnnnngatacttccttttggacgttacaaagtccagattgg
aaaacgaacgcggcaaaagtaacgctgaaacgtgccggttattacactattccgccattg
gacaaattagaggattatgtttgcggagaaacgtgtgtcgtgccaaattttacggttgga
cgggaaaattacggaaacgtctatttttctgattcgttcgatatttatggcctcaattta
gatgaaatcgtacattttcgacacaaagaggtcatcatttatccggatgacgagaagaaa
ccaccagtcggacatggattaaatcgtaaggcgcaagttactttggacagagtgtggccg
cacgataaatctctgcacaaacccatcaccgacccccaccgactcgcggcaatggattac
gaagaaaaattgcgaagagtatccgcgaaacacgataccagatttctcgagtatcgccct
gagactggttcatgggtgttcaaggtcgaccatttttcaaaatatggcctgagcgattcg
gacgaagacgacagtggtaacgtgcctaccgccattgacctgaaaaggtttaaattgtcc
gagtcgttccaaaaaaaggcggctgcgactaaattaaaacagtcgtatcgtccggtaaga
tattcaaacccgctcgccaaatcggcgcgatagcgtaaccattatttcttttcattacta
tttcctatgttcccccttacaaaggagaagaaaattagcagcagcagcagcaccgttgcc
aatggtgcgagcaacgagtcgaagattgagaacacggtaagtccaacgagcgacaacgct
cggatcttgggtacggatagtcataaattgcaactgatgaaggccagtttcttcgacggc
agcgacgaagagatgaatgacatctgcgaacaagaatcagccttactcgtttctggtcaa
aaaagttccgtcgtacgatgttacatcgacagttttgaaactctggacgaggaacagaga
cagaaaatgacttacagtccaatcttgcggtcaaacttgacgattcatcgtactccatct
accgtttacgaagagtcgatatttccgaaaacagatagtaaattgaaaccatcgatggac
atcgtcaccgcaaagtcgtccatctacggtagacagtttccagatcctgttgtgattccg
gtaaccgcgattctgaaatggcattccgaagtagttccgttgtcgaaatcgattataaac
aaattgcagtcccgctgtgttgccgatgctggtatacacatgggaagaatgtttaaacca
agctggggacgcggcttaacgctgctgacactgagcacgcgaggacaagccgacggtgta
ccgctacacagttcgttcgaacagatcggttcatacgtgggcggtcgtattccggaagac
ccgacgtctgtcgcaatcgttcaacgtatacaaatcttgggtggtagcggaaccgacgag
gatcgcgttgaaatattcaaaagaagcgtagaaggtcatctaaagatccagctgtcgcac
cgcatcatggatcaggagggggattgtccaattttcctcgtggacacggacattaacaaa
gcgagcatggctttacacgcgcactgtagtttggcggaagaattcgccgaccagtttgcc
gccgacagtttcgcggcatacgtagccaacgtctggaaactctgcgtggctctatgggga
actctacccgatgtaaacgttcttaccgtaaacgcggctgaccacaatatcgtaatagcc
cgacgggaagccattggagagtggttcaggagtgttatacagaggggattggacggatta
gaaggagagaaaacaatgatcagcaacgaagagaggatgctggatctgctgtctgctgcc
gaactgcaaggggcgtgcgaactcgcacgagaggcgggcgatcactgtttggcgctgctc
atggctcagttacgcagcgggatgcctacgaaaacgttgataaagcagcaaatcgcgttg
tggcaagactctggcgtcgacgagaacatatcgaccgaccggttgaaactgtttgcattg
gtggcgggcgaaccgctaatatccagtaaacacggtctcatcaatgtttgcgagaatctc
gattggaagagggcattggccgtccatctatggtatctttcgtcaccggtcgcatccatc
agagacatattagagctttacgaggcctcgttcgacgcgaccaaaacaacggacgcctac
gcggcagcacctatacccgaatacagaggagcggtcgattacgagctggaagcgaacaac
gggcaatcgatatacgatctgtgttatcatctgttgaagttgttctgtatcggcaatcat
acgttggggaatcttttgaatcccgctacccataccgctgacccattagattacagactc
agttggctgatgcaacaagtacttttagcgttgggctactcgcacttggcggaacatgtt
gccgcgttgactcatatcaattttgccacgcaactggaagcgtatggactttggcactgg
gccatatttgtgatgttacatttaaaagacaccgggaaaaggaaagccgcggtgaaaaat
ttattgcaacgacacgttgaaatagaccatatccgtgattacatcgaacgagaaacgttt
ttgcgggaagagctcggtataccctccgtttggattcacgaagccaaagctgtgaaaagt
tacgtagccaaaaggtacggagaagccgcgtcgtatttcattcaagcggaacagtggaac
actgcgcacgaaattattatcgaacatcttgccgcggatgctataataaacgagaattac
gagtatctacgcgagctgttgagtccattgattccttcggaatgtagcagcaccataagt
ggatggtcgtatcaaggggaattgctttgggactacatggagatcgctatggatatcgaa
tcattgttgcgcggggccgatcctcgcgaaataagttacaaattggagctgctgaagcca
cgattaacgtgtctttgcttaaagattaaccaattcccctgtccgaccgcgaagcacaga
ctctgtcaagcggaaatcgcgaaaagaacgttgcacctgggcaaaagtttattacaggca
aacgaaaatagatctaccgtaattcttcagctggtctcgcagttgccgttacccgaagac
tacgctcaacaggaacttcgtcccatcgttattatgcgggtaaacgagattatatctcag
gcagtatag
DBGET
integrated database retrieval system
