Nakamurella multipartita: Namu_2953
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Entry
Namu_2953 CDS
T00991
Name
(GenBank) DSH domain protein
KO
K03727
ATP-dependent RNA helicase HelY [EC:3.6.4.-]
Organism
nml
Nakamurella multipartita
Brite
KEGG Orthology (KO) [BR:
nml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nml03019
]
Namu_2953
Messenger RNA biogenesis [BR:
nml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Namu_2953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
AAA_22
MTR4-like_stalk
Motif
Other DBs
NCBI-ProteinID:
ACV79291
UniProt:
C8XAN8
LinkDB
All DBs
Position
complement(3235007..3237829)
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AA seq
940 aa
AA seq
DB search
MTQDSRTPHEDGSPADRYARAQVAQAARRQYPKLAEFVLTRPFALDPFQVQGCQALEDGR
GVLVCAPTGAGKTVVGEFAVHLALASGGKCFYTTPIKALSNQKFVDLIAQYGPDRVGLLT
GDTSVNSHAPVVVMTTEVLRNMLYAGSPDLAELTHVVLDEVHYLADKFRGPVWEEVILHL
AADVAVVGLSATVSNAEEFGAWLAEVRGELAVVVDEVRPVPLWPHMMVGRRLFDLFSVRD
QEAGPSDPPGSGQLRIDPALTRAIHDAEALADRFGGGGSRVGRRGERGRPPGGPRWRPPN
RVDVIERLDMAGLLPAITFIFSRAGCDAAVAQCVRSGLRLTTEHERDEIRQIVDRRTVEL
LDADLGVLGYWEWREGLERGVAAHHAGLLPVFKETVEELFVAGLVKAVFATETLALGINM
PARTVVLEKLGKFNGESHADLTAGEYTQLTGRAGRRGIDVEGHAVVLWSPGMDPRVVGGL
ASRRTYPLRSSFRPSYNMAVNLVDRLGRQAARALIEQSFAQYQANGAVVGMARQVSRNTE
AIAAHQRTMQCHLGDTAEYLGLLTELADAEREIARAGAARRRDATAQDLAELRRGDVIEV
PTGRRSGLAVVLDPGVDPDGSARPLVVTAGRWAGRLSAADFRGRVPALGRVKLGKFTDHR
SPKVRRDLSSAIASSGIRAPGRDRRAARGHDAASADEMDLTVLRKAIRAHPVHGCSDREE
HLQWARRWRRLIAENEALAAKVAAATGSLGQALDRIVRLLTDEGYLDGDALTDDGRMLAR
IWCESDLVVAECLRRGTWTGASPPALAAAVSCLIFESRRDNPGMSRIAVGEIGDLVSATV
DVWARIAGAEREIGLPATRDVDPGFAAAVAAWCRGASLAETLTVAVSGGTDISAGDFVRW
CRQVVDLLDQIAGVAPAPVAAIARSAVGSLRRGVVSLGAA
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaggacagtcgaacaccgcacgaggacgggtcaccggcggatcggtacgcccgc
gcccaggtggcgcaggcggcccgccgccagtacccgaagctggccgagttcgtgctgacc
cggccgttcgcgctcgatcccttccaggtacaggggtgccaggcgctggaggacggccgg
ggcgtgctggtgtgcgcgccgaccggtgccggcaagacggtcgtcggtgagttcgcggtg
cacctggcgctggcctcgggcggcaagtgcttctacacgaccccgatcaaggcgctgtcc
aaccagaagttcgtcgatctgatcgcccagtacggaccggaccgggtgggcctgctgacc
ggcgacacctcggtcaattcccatgcgccggtggtggtgatgaccaccgaagtgctgcgc
aacatgctctacgccggatccccggacctggccgagctcacccacgtggtgctcgacgag
gtgcactacctggccgacaagttccgcgggccggtgtgggaggaggtcatcctgcacctg
gccgccgacgtggccgtcgtcggcctgtcggccacggtatccaacgccgaggagttcggc
gcctggttggccgaggtgcgcggcgagctggccgtcgtcgtcgacgaggtgcggccggtt
ccgctgtggccgcacatgatggtcgggcgacggctgttcgacctgttcagcgtgcgcgac
caggaggccggcccgtccgacccgcccggctcggggcagctgcggatcgacccggccctg
acccgggccatccacgacgccgaggcgctggccgaccgtttcggcggcggcgggtcacgg
gtgggccgccggggggagcggggacggccgccgggcggcccgcgctggcgtccgccgaac
cgggtcgacgtcatcgagcggctggacatggccgggctgctgccggccatcaccttcatc
ttctcccgggccgggtgcgacgccgcggtcgcccagtgcgtccgctccgggctgcggctg
accaccgagcacgagcgggacgagatccggcagatcgtcgaccggcgcacagtggagctg
ctggacgccgacctcggggtgctgggctactgggagtggcgcgagggcctggaacgaggg
gtggccgcgcaccacgccggcctgctgccggtgttcaaggaaaccgtcgaggagttgttc
gtcgccggcctggtcaaggccgtcttcgccaccgagacgctggccctgggcatcaacatg
ccggcccgcacggtagtgctggagaagctgggcaagttcaacggggagagccacgcggat
ctgaccgccggggaatacacgcagctgaccggccgggccggccgccggggcatcgacgtc
gaaggccacgcggtggtgctgtggtcgccgggaatggacccgcgggtggtgggcgggctg
gcctcgcggcgcacctacccgctgcgctcctcgttccggcccagctacaacatggcggtc
aacctggtcgaccggctcggccggcaggcggcccgggcactgatcgagcaatccttcgcc
cagtaccaggccaacggcgcggtggtcggcatggcccgtcaggtctcccgcaacaccgag
gccatcgccgcgcatcagcgaaccatgcagtgccatctgggcgacaccgccgaatacctg
ggcctgctgaccgagctggccgatgcggaacgggagatcgcccgggccggggccgcccgc
cggcgcgacgccaccgcccaggacctggccgaactgcggcgcggcgacgtgatcgaggtg
ccgaccgggcggcggtccggcctggccgtcgtgctcgatcccggggtcgatccggacggt
tcggcccggcccctggtggtcaccgccggccgctgggccggccggctgtccgccgccgac
ttccgcggccgggtgcccgccttgggccgggtcaagctgggcaagttcaccgaccaccgt
tcacccaaggtccggcgggacctgtcctcggcgatcgcctcctccggtatccgcgcgccc
ggccgggaccggcgggcggcccgcgggcacgacgccgcctcggccgacgagatggacctg
accgtgctgcgcaaggcgatccgggcgcatccggtgcacggctgcagcgaccgcgaggag
cacctgcagtgggcccgccggtggcgccggctgatcgccgagaacgaggccctggccgcc
aaggttgcggcggcgaccggatccctgggtcaggcgctggaccggatcgtgcgcctgctg
accgacgaggggtacctggacggcgacgcgctgaccgacgacggccggatgctggcccgg
atctggtgcgagagcgacctggtggtggccgagtgcctgcgccgcggcacctggaccggc
gcgtccccgccggcgctggccgcggcggtgtcctgcctgatcttcgaatcgcgccgcgac
aacccgggcatgagccggatcgccgtcggcgagatcggcgacctggtgtcggcgaccgtg
gacgtgtgggcccggatcgccggtgcggagcgggagatcggcctgccggcgacccgcgac
gtcgaccccgggtttgccgccgcggtcgccgcctggtgccggggggcgtcgctggccgag
accctgacggtggcggtcagtggcggaaccgacatctccgccggggatttcgtgcgctgg
tgccggcaggtggtcgatctgctcgaccagatcgcgggcgtcgcgccggcgccggtggcc
gcgatcgcccggtcggcggtcggatctttgcggcgcggcgtggtatccctcggcgccgcc
tga
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