Nakamurella multipartita: Namu_3992
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Entry
Namu_3992 CDS
T00991
Name
(GenBank) RNA binding metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
nml
Nakamurella multipartita
Pathway
nml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Namu_3992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nml03019
]
Namu_3992
Messenger RNA biogenesis [BR:
nml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Namu_3992
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
ACV80284
UniProt:
C8XHI1
LinkDB
All DBs
Position
complement(4408713..4410545)
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AA seq
610 aa
AA seq
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MSDALVIALILALLVAVGAVVALARRKPVAPPPAVDEDSLRRLLDEAVSRSASEVKPAAE
PDLGRFALLSHEAQAAAEAADAVRRTAAEAAEELSVRTRRDAEQLRQDAQAEAQRTIAAA
RAQAAELRAGLENERTRIAGEATAALAQDRKELQEAEQRLRAATQALADEQHALVADRRR
IGSESSELASAKRALEAKAAALAEQEADLRKQAGALDQRERDLAAADAAREAELVRISGL
TVEAARAELLAGQEEAVRRDAAMMIRRIESEAQNSAKQRARAIVAEAIQRVASDQTAQTV
VAVVHLPADEVKGRIIGREGRNIRAFETVTGVNVIIDDTPEAVLLSCFDPVRREIGRITL
EMLIDDGRIHPHRIEEAFERARDEVDVLCRRAAEDAMLDVRITDLHPELVALIGRLKYRT
SYGQNVLGHLVETAHIARAMAAELGIDPTVVTRGAFLHDIGKALTHEVPGSHALIGADLA
RKYGESDEVVHCIEAHHDEVAPSTVEAVLTQAADACSGGRPGARRESLESYVQRLERIEA
IAGAKKGVEKVFAMQAGRELRVMVKPDIVDDVEAHILAREVAKQIEEELTYPGQVRVTVI
RESRATEIAR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacgctctcgtcattgccctgattctggcgctgctggtggcggtcggtgctgtg
gtggcattggcccgacgcaagccggtggccccgccaccggccgtggacgaggactcgctg
cgtcgcctgctggacgaggcggtcagccgcagcgcgtccgaagtcaagccggccgccgag
cccgacctgggccggttcgccctactcagccacgaggcgcaggccgccgccgaggcggcc
gacgccgtccgccggaccgcggccgaggccgccgaggaactgtccgtgcgcacccggcgg
gacgccgagcagctgcgccaggacgcccaggccgaggcgcagcgcacgattgcggccgcc
cgggcccaagcggccgaactacgcgccggcctggagaacgagcgcacccggatcgccggc
gaggccacggccgcgctcgcccaggaccgcaaggaactgcaggaggccgagcagcggctg
cgggccgccacccaggccctggccgacgagcagcatgccctggtcgccgaccggcgccgc
atcggcagcgagagcagcgagttggcctcggccaagcgggcgctggaggccaaggccgcc
gccctggccgaacaggaggccgacctgcgcaagcaggccggcgccttggaccagcgcgaa
cgcgacctggccgccgccgacgcggcccgggaggccgagctggtccggatctccgggctc
acggtcgaggcggcccgggccgagctgctggccggccaggaggaagcggtccgccgggac
gcggcgatgatgatccgccgcatcgaatccgaggcccagaactcggccaagcagcgggct
cgggcgatcgtcgccgaggcgatccagcgggtggcctcggaccagaccgcccagaccgtg
gtggccgtggtccacctgcctgccgacgaggtcaagggccgcatcatcggccgcgagggc
cgcaacatccgcgcgttcgagacggtcaccggcgtcaacgtcatcatcgacgacaccccc
gaagcagtcctgctgtcctgcttcgacccggtccgccgggagatcggccgcatcaccctg
gagatgctgatcgacgacggccggatccacccgcaccgcatcgaggaggccttcgaacgg
gcccgcgacgaggtcgacgtgctctgccggcgggccgccgaggacgccatgctcgacgtc
cgcatcaccgacctgcacccggagctggtggccctgatcgggcggctgaagtaccggacc
tcctacggccagaacgtgctcggccacctggtcgagaccgcgcacatcgcccgggccatg
gccgccgaactgggcatcgatccgaccgtggtcacccgcggtgccttcctgcacgacatc
ggcaaggcgctgacccacgaggtccccggctcgcacgccctgatcggggccgacctggcc
cgcaagtacggcgagtccgacgaggtcgtgcactgcatcgaggcccaccacgacgaggtg
gcccccagcaccgtcgaggccgtgctcacccaggcggccgacgcctgctcgggcggccgg
cccggtgcccgccgcgagtcgctggagtcctacgtgcagcgactggagcggatcgaggcc
atcgccggcgccaagaagggcgtggagaaggtcttcgccatgcaggccggtcgcgagctg
cgggtcatggtcaagccggacatcgtcgacgacgtcgaggcgcacatcctggctcgcgag
gtggccaagcagatcgaggaggagctgacctaccccggtcaggtccgggtcaccgtcatc
cgagagtcccgggccaccgagatcgcccgctag
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