KEGG   Nitrosopumilus maritimus: Nmar_1037
Entry
Nmar_1037         CDS       T00626                                 
Name
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
nmr  Nitrosopumilus maritimus
Pathway
nmr03030  DNA replication
nmr03410  Base excision repair
nmr03420  Nucleotide excision repair
nmr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nmr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Nmar_1037
   03410 Base excision repair
    Nmar_1037
   03420 Nucleotide excision repair
    Nmar_1037
   03430 Mismatch repair
    Nmar_1037
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nmr03032]
    Nmar_1037
   03400 DNA repair and recombination proteins [BR:nmr03400]
    Nmar_1037
Enzymes [BR:nmr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Nmar_1037
    6.5.1.6  DNA ligase (ATP or NAD+)
     Nmar_1037
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Nmar_1037
DNA replication proteins [BR:nmr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Nmar_1037
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Nmar_1037
DNA repair and recombination proteins [BR:nmr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Nmar_1037
   NER (nucleotide excision repair)
    Other NER factors
     Nmar_1037
   MMR (mismatch excision repair)
    Other MMR factors
     Nmar_1037
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: ABX12933
UniProt: A9A3K1
LinkDB
Position
910852..912618
AA seq 588 aa
MEFSILADSFNKMESTRKRLELTQYLVELFKKTPQEVISKIVYLLQGKLRPDFEGVELGV
AEKLAIRAISKSSGIPIKKIEEEYRKGGDLGHAATTILEQKTQTTFLVEDITVERVYETL
FKIAKLEGNRSQDMKMKYISSLLNDASPLEASFILKILLGTLRLGIAENTVMDALALAFS
GNKENRKILEHAYNVSSDLGKVAEVLATEGLAEVEKFKIILFNPIRPMLADRVKSEQEAI
EKMGNEFAAEYKLDGERVQLHIEGDKVVLFSRSLENISSYYPDIIEKIPKTIQAENIVLE
AEAVAINENTGEFLPFQELMHRRRKYKIEKAVTQYPITVNLFDILYCNGKSCLELDYKER
REKMEKVVKEDDFVKHIPMAIVKNENDIEDFFENSINAGSEGLMLKTLVSPYQAGSRGSH
WLKLKREYQNELGDSLDLVVIGGFFGKGRRTGNYGTLLLATYEEDEDTFTSICKVGTGFS
DEDLDQLYQILNPKVTIKKNPRINSEMEADVWFEPELVIEVVASEITLSPIHKAARDKIR
KGAGLALRFPKFTGKMRVEKMAEDASTNEEVITLYQGQKKVAHDKSLM
NT seq 1767 nt   +upstreamnt  +downstreamnt
atggagttttctatcttagctgattcgtttaacaagatggaatcaactagaaaaagatta
gaactaacacagtacttggtagaattatttaaaaaaactccacaagaagtgatttcaaag
atagtctatttacttcaaggaaaactaagaccagactttgaaggagtggagttgggagtt
gcagaaaaacttgcaataagagcaatctcaaaatcttcaggaataccaattaaaaaaatt
gaagaagaatacagaaaaggtggagacttggggcatgcagccactacaattctagagcaa
aaaacgcagacaacatttctcgtagaagacattacagttgaacgagtctatgagacatta
ttcaagattgcaaagttagagggcaatagatcacaagacatgaagatgaaatacatttca
agcttacttaatgatgcaagtccgttagaggcaagctttattctaaaaatattgttaggt
acactaagactaggaattgcagaaaatactgtaatggatgcattagcattagcattttca
ggcaacaaagaaaatagaaaaattttggagcatgcatacaatgtttctagtgatttggga
aaagttgcagaagttttagcaactgaaggattagcagaagttgaaaaattcaaaataatt
ttgtttaatccaatcagaccaatgcttgcagacagagtaaagagcgaacaagaagcaatt
gaaaaaatggggaatgaatttgcagctgaatacaaattagatggagaaagagtacaacta
cacatagaaggagacaaagtagttttattttcaagaagtttagaaaatatttcaagttat
tatccagatattatagaaaaaattccaaaaacaattcaagcagaaaatattgtactagag
gcagaagcagtagcaatcaatgaaaacacaggagagtttttgccatttcaagaattaatg
catagaagaagaaaatacaaaatagaaaaagcagttacacaatatcccataacggtaaat
ctctttgatatcttgtattgtaatggaaagagttgtcttgaattagactataaagaaaga
agagaaaaaatggaaaaagtggtaaaagaagatgattttgtaaagcacattcccatggcc
attgtcaaaaatgaaaatgatattgaagacttttttgaaaacagcatcaatgcaggaagt
gaaggactaatgctaaagacgcttgttagtccatatcaagcaggttcaagaggaagtcac
tggttaaaactgaaaagagaatatcaaaatgaacttggagatagtttagatcttgttgtg
ataggaggattctttgggaaaggaagacggacaggaaactatggaactttattgttagca
acatacgaagaagatgaagatacattcaccagcatttgtaaagttggaacaggtttttca
gatgaagatttagatcaattatatcaaattctaaatcccaaagtaacaatcaagaaaaat
ccgcgtattaatagtgaaatggaagcagatgtttggtttgaaccagaattagtaatagag
gtggttgcatcagagattacacttagtccaattcacaaagcagctagagacaaaattaga
aagggagcaggacttgcattgagatttccaaaatttacaggaaagatgagagttgaaaaa
atggcagaagatgcatctactaatgaagaagtgatcacattataccaaggtcagaaaaaa
gtggcacatgacaaaagtctcatgtaa

DBGET integrated database retrieval system