KEGG   Candidatus Nitrospira neomarina: PQG83_11050
Entry
PQG83_11050       CDS       T09428                                 
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
  KO
K01790  dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
Organism
nneo  Candidatus Nitrospira neomarina
Pathway
nneo00521  Streptomycin biosynthesis
nneo00523  Polyketide sugar unit biosynthesis
nneo00541  O-Antigen nucleotide sugar biosynthesis
nneo01100  Metabolic pathways
nneo01110  Biosynthesis of secondary metabolites
nneo01250  Biosynthesis of nucleotide sugars
Module
nneo_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:nneo00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    PQG83_11050 (rfbC)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    PQG83_11050 (rfbC)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    PQG83_11050 (rfbC)
Enzymes [BR:nneo01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     PQG83_11050 (rfbC)
SSDB
Motif
Pfam: dTDP_sugar_isom
Other DBs
NCBI-ProteinID: WNM60300
UniProt: A0AA96JUS0
LinkDB
Position
complement(2557933..2558472)
AA seq 179 aa
MIFTESTIKGAFLIDPERIEDSRGFFARTMCQREFEAHGLTFKQVQCNLSFNKKKGILRG
MHYQCAPFEEAKLVWCIKGAIYDVLIDLRPLSQTYTQHAAVILTAENRRMHYIPEGCAHG
FQTLEDNTEIFYQISAFYDPQCARGVRWDDPAFGIQWPADERLISDRDLAYPDFIEPQH
NT seq 540 nt   +upstreamnt  +downstreamnt
atgattttcaccgaatcaacaatcaagggagccttcctcattgatccggagcggattgaa
gacagtcgcgggttctttgcccgaacgatgtgtcaacgagagtttgaggcgcatggactc
acattcaaacaggtgcaatgcaacctttcttttaataaaaagaaagggatcctcaggggg
atgcactatcaatgtgcgccgtttgaagaagccaagctcgtctggtgcattaagggcgca
atctacgatgtgttgatcgatttgcggcctttatctcaaacgtatactcagcatgccgcg
gtcattctcactgcggaaaaccggcggatgcattatatcccggaaggatgtgcccatgga
tttcagactctagaagataatacggagattttttaccagatctccgcgttctacgatcct
caatgtgccagaggggtgcggtgggatgatcctgcgtttgggattcaatggccggccgat
gagcggctcatatctgatcgcgacctggcttacccagattttatcgaaccccaacattga

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