Candidatus Nitrospira neomarina: PQG83_11050
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Entry
PQG83_11050 CDS
T09428
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo00521
Streptomycin biosynthesis
nneo00523
Polyketide sugar unit biosynthesis
nneo00541
O-Antigen nucleotide sugar biosynthesis
nneo01100
Metabolic pathways
nneo01110
Biosynthesis of secondary metabolites
nneo01250
Biosynthesis of nucleotide sugars
Module
nneo_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PQG83_11050 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PQG83_11050 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PQG83_11050 (rfbC)
Enzymes [BR:
nneo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PQG83_11050 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WNM60300
UniProt:
A0AA96JUS0
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Position
complement(2557933..2558472)
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AA seq
179 aa
AA seq
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MIFTESTIKGAFLIDPERIEDSRGFFARTMCQREFEAHGLTFKQVQCNLSFNKKKGILRG
MHYQCAPFEEAKLVWCIKGAIYDVLIDLRPLSQTYTQHAAVILTAENRRMHYIPEGCAHG
FQTLEDNTEIFYQISAFYDPQCARGVRWDDPAFGIQWPADERLISDRDLAYPDFIEPQH
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgattttcaccgaatcaacaatcaagggagccttcctcattgatccggagcggattgaa
gacagtcgcgggttctttgcccgaacgatgtgtcaacgagagtttgaggcgcatggactc
acattcaaacaggtgcaatgcaacctttcttttaataaaaagaaagggatcctcaggggg
atgcactatcaatgtgcgccgtttgaagaagccaagctcgtctggtgcattaagggcgca
atctacgatgtgttgatcgatttgcggcctttatctcaaacgtatactcagcatgccgcg
gtcattctcactgcggaaaaccggcggatgcattatatcccggaaggatgtgcccatgga
tttcagactctagaagataatacggagattttttaccagatctccgcgttctacgatcct
caatgtgccagaggggtgcggtgggatgatcctgcgtttgggattcaatggccggccgat
gagcggctcatatctgatcgcgacctggcttacccagattttatcgaaccccaacattga
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