Nipponia nippon (crested ibis): 104010153
Help
Entry
104010153 CDS
T05756
Symbol
SMARCA2
Name
(RefSeq) LOW QUALITY PROTEIN: probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104010153 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nni03021
]
104010153 (SMARCA2)
03036 Chromosome and associated proteins [BR:
nni03036
]
104010153 (SMARCA2)
Transcription machinery [BR:
nni03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104010153 (SMARCA2)
Chromosome and associated proteins [BR:
nni03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
104010153 (SMARCA2)
Chromatin remodeling factors
BAF complex
104010153 (SMARCA2)
PBAF complex
104010153 (SMARCA2)
GBAF(ncBAF) complex
104010153 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
104010153
NCBI-ProteinID:
XP_009460503
LinkDB
All DBs
Position
Unknown
AA seq
1569 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIPGDPQVMNQPNRGPSPFSPVQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHAMSGAAAGP
GPAPGLPGHTAAITPKTWTEGQAPDMSVSNVQQKLPAPPPSGRPSPAPPAAQNPPPAMPG
PSVPQPPPGQPSSPIQLQQKQNRISPVQKPQGLDPVEILQEREYRLQARIAHRIQELENL
PGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLR
EARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWH
ANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLV
WEHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGK
VLLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDDEEESSRLEADEKILLD
PNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGT
LKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLS
TLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKI
RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIF
KSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVE
YVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQ
HIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIME
DYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVII
FDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGM
FDQKSSSHERRAFLQAILAHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRE
DARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEK
QWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKL
TKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY
RSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDED
DDEEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQ
SEASGSDDE
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagaccctggcgccatgcctcatcctggtccttctcctggaccagga
ccttcacctggaccgattctaggacctagcccaggaccagggccatctcctggctcagtt
cacagcatgatggggccaagtcctggtccacccagtgtcccgcatccaatgccgacaatg
gggcctactgattatccacaggaaggcatgcaccaaatgcataagtctattgatggcttg
cacgaaaaaggaatggttgaagacgttcattgtggctccatgaagagtatgcgacctcct
caccctggaatgggcccacctcagagtccaatggaccagcatagccaaggttatatgtct
ccacacccatctccactaggagcaccagagcatgtgtccagtccaatgtctggaggaggt
ccaactccaccccagatgactcccagccaaccaggacccattataccaggagacccacaa
gttatgaatcaacctaacagaggtccttctcctttcagccctgtacagctgcatcagctg
cgggctcagattctagcgtacaaaatgttagctagaggtcagcctttaccagaaaacctc
cagcttgctgttcagggcaagaggaccctgcctggcattcaacagcagcagcctcccagt
gccttcaacagacagtctggtattggattacatgcaatgagtggtgctgcagctggacca
gggcctgctccagggttgcctggacatacagctgccattacccctaaaacttggactgaa
ggccaagccccagatatgagtgtctccaatgtgcagcaaaagcttcctgctccaccccct
agtggcaggccttctcctgccccccctgctgcccaaaacccgccgcccgccatgcctggg
ccttctgtcccgcagccaccacctggacagccttcttcacccattcagctgcagcaaaag
cagaatcgcatcagccctgtccaaaagccacaaggattggatcctgttgaaatactccaa
gaacgtgaatataggcttcaggctcgaattgctcacagaatccaggaactggagaacttg
cctggttctctgccccctgatctgcgaaccaaagctacagtggagttgaaggcacttagg
ttactgaatttccagcgccagctaagacaagaggtagtagcctgcatgcgtcgtgacaca
acactggagacagcgctgaactccaaagcctacaaacgaagcaaacgccagactttgagg
gaggcccgtatgacagaaaagcttgagaaacagcagaagatagaacaggagaggaaacgc
aggcagaagcatcaggaatacctgaatagcatattgcagcatgctaaagattttaaagag
taccaccggtcagttgctgggaaaattcagaaactttctaaagctgtggcaacctggcat
gccaacactgagcgtgagcagaaaaaagaaacggagagaattgagaaagaaagaatgagg
agactaatggctgaagatgaagaaggctaccgtaagctgattgaccaaaagaaagatagg
cgcctggcctacctattgcagcagacagatgagtatgtggctaatttgactaacctggta
tgggagcataaacaggcacaagcagctaaagagaagaagaagagaaggagaagaaagaag
aaggctgaagaaaatgcagaaggaatggcatctggtctcggtcctgatggagagcccata
gatgagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaa
gttcttcttggaccagaagcaccaaaagcaagtcagctggatgcttggctggagatgaac
cctggctatgaagttgctcccaggtcagacagtgaagatgaaagtggctctgaatatgag
gaggaggatgatgaagaagaatcaagcaggttagaagcagatgagaagatactcctggat
cctaacagtgaggaagtttctgagaaagatgcaaagcaaatcattgagacagccaaacaa
gatgtggatgatgaatatagcatgcaatatagtgctagagggtctcagtcctactacact
gttgctcacgcaatcacagaaagggtggaaaagcagtcttctcttcttattaatggcaca
ctaaaacattatcagctccagggactggaatggatggtttcactctataataacaatctg
aatggaattttagctgatgaaatgggactaggaaagacaatacagactattgcactcatc
acttacctgatggagcacaaaagactcaatggtccctatctcatcattgttcccctttcg
actttatccaattggacatatgaatttgacaaatgggctccttctgtggtgaagatatct
tacaagggtacacctgcaatgcgccgctcactcgttcctcagcttcggagtggaaaattt
aatgttcttttaactacttatgagtacataataaaggacaaacatatccttgctaagatt
cgatggaaatacatgattgtagatgaaggccatcgaatgaagaaccatcactgcaagctg
actcaggtcttgaatactcactatgtggcccctaggcgaatactgctgactgggactcca
ttgcagaacaaactgcctgaactttgggctcttctcaatttcctcctcccaaccattttc
aagagttgtagcacctttgaacagtggttcaacgctccatttgccatgactggagaaagg
gtggacttaaatgaggaagaaactattctgatcatccgtcgtctccataaagtgctccga
cccttcttgctgagaagattgaagaaagaggttgagtctcaactgccagaaaaggtggaa
tatgtgatcaaatgtgatatgtcagctcttcagaagatcctgtatcgtcacatgcaggcc
aagggaatccttctcacagatggttctgaaaaagacaagaagggaaaaggtggggcaaaa
actcttatgaacactatcatgcaattgagaaagatatgcaatcacccatacatgtttcaa
cacattgaggagtcctttgctgaacatttaggctactcaaatggtgtcatcaatggagct
gaactttatcgggcctcagggaagtttgagctactcgatcgtattctgccaaagttacga
gctactaaccatcgtgtgcttcttttctgtcaaatgacatcactcatgaccattatggaa
gactactttgcctttcgaaatttcctttacctgcgtcttgatggcacaacaaaatcagag
gatcgagctgctctgttgaagaagttcaatgaacctgggtcacaatactttatcttcttg
ctgagtacaagggctggagggctaggcttaaatctccaggctgctgacactgttataatc
tttgatagtgactggaatcctcaccaggacttgcaggcccaagatagggctcacagaatt
ggtcagcagaatgaagttcgagtcctgcgactgtgcactgtgaacagtgtggaagagaag
atacttgctgctgcaaagtataagctgaatgtagatcaaaaagttattcaggctggaatg
tttgatcagaagtcttcaagccatgaaaggagagccttcctacaggctatactggcgcat
gaagaagaaaatgaggaggaagatgaagttcctgatgatgagactctgaatcagatgatt
gctcgacgtgaggaggagtttgatctctttatgcgcatggacatggaccgtcgcagggag
gatgccagaaaccccaagcgtaagccccgtttgatggaggaggatgaattaccatcctgg
attattaaggatgatgctgaagttgaaaggcttacgtgtgaagaagaagaagaaaaaata
tttggaagaggatcccgtcaacgcagggatgtggactacagtgatgctctcacagagaaa
caatggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaagtccggctt
aaaaaacggaagagacgaagaaatgtggataaagattctgggaaggaggatggagagaaa
gcaaagaaaagaagaggcagacctcctgcagagaagttgtcacccaacccaccaaaactg
acaaaacaaatgaatgctatcattgatactgtgataaactacaaggatagttcaggacgg
cagctaagtgaagtcttcattcagcttccatctaggaaagaattaccagagtattatgaa
ttgattaggaaaccggtagacttcaaaaagataaaggaaagaattcgcaaccataagtat
cggagtcttggagacttggagaaagacgtcatgttgctgtgtcacaatgctcagacattc
aatttggagggatcacagatctatgaggattccattgttcttcagtctgtgttcaaaagt
gcacgacagaagattgccaaagaagaagaaagcgaggatgaaagcaatgatgacgaagat
gatgatgaagaagaagaatcagaatcagaatcaaaatcagtgaaagtcaaaatcaagcta
aataagaaggacgaaaaaagtcgggagaaaggaaaaggcaagaagaggcaaagccgagca
aaagccaagcctgtcgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccag
tcggaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
