Nipponia nippon (crested ibis): 104020384
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Entry
104020384 CDS
T05756
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03420
Nucleotide excision repair
nni04115
p53 signaling pathway
nni04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104020384 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
104020384 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
104020384 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nni04121
]
104020384 (DDB2)
03400 DNA repair and recombination proteins [BR:
nni03400
]
104020384 (DDB2)
Ubiquitin system [BR:
nni04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
104020384 (DDB2)
DNA repair and recombination proteins [BR:
nni03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104020384 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
104020384
NCBI-ProteinID:
XP_009472084
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAPVNQPKDKKHERAREHWPEDAKSAGKRKPDCKELGNEPLAKKLFLRKTSKPPEKIGWN
GGGSMVRNNKVLFHQLERQRSIVHYVYQNMLGGSIRAQLRQCLQLPFLRSLASYRLFRTA
SPFDRRVTCLEWHPTHPSTVAVGSKGGDIILWDYEVLTKTCFIKGKGPGDSLGDIKFSPY
EAVKLYVASGDGTLSLQDLEGRAVQVISRAPDCGHEYHNVCCWYCSVDVSASCRAVVTGD
NVGNVVLLSTSGEEIWKLKLHRKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKNKMN
FLHLLPHDKPVNAAYFSPTDGAKLLSTDQRSEIRVYSSSDWTKPQHLIPHPHRQFQHLTP
IKATWHPRYDLIVAGRYPDPKFPGYTVNELRTVDVFDGNTGEMVCQLHDPNASGIISLNK
FNPMGDTLASGMGFNILIWSREEMVAKKQEHLLKAMTEQGIGSWSLSRRGGQRQANPGTS
KLKANLLSWELEEMRTKTNDSKSQGRKRKGKDLEN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgaaccagccaaaggacaagaagcatgagagggcacgtgagcattggccg
gaagatgcaaaatcagctgggaagaggaaaccggactgcaaggaactagggaatgagcca
ctagcaaagaagttgtttctgagaaaaacatccaaacccccagagaaaatcggttggaac
ggaggtgggtccatggtgagaaacaacaaagtccttttccatcagctggagcggcagcgc
agcattgttcattatgtctaccagaacatgctgggaggctccattcgggcacagctcagg
cagtgtttgcagctgccttttctgcgttctcttgcctcataccgcctctttcgaacagca
agtccctttgacaggagagtgacatgcctggaatggcatccgacacaccccagtactgta
gctgttggttccaaaggtggagacatcatcctttgggactatgaagtacttactaaaacc
tgcttcataaaagggaaagggccaggagattctctcggagacatcaagttcagtccttat
gaggcagtgaagctttatgtggcatcaggggatggcaccctaagtctgcaggaccttgag
ggcagagcggtgcaggtgatctcccgtgccccggactgtggccatgagtaccataatgtt
tgttgctggtactgcagtgttgatgtttctgcaagctgccgtgcagtggtgacgggtgat
aatgtgggcaacgtggtcctgctcagcacttctggtgaagagatttggaagctgaaattg
cacaggaagaaagtgactcacgtggaatttaactcccgatgtgagtggttgttggccaca
gcgtctgtggatcagacggtcaaaatctgggacctcagaaacatcaaaaacaaaatgaat
tttcttcatctgcttcctcatgacaaacccgtcaatgcagcttacttcagcccaacagat
ggtgccaagctcctgagcacagaccagcgcagcgaaatcagggtttactcatcttcagac
tggaccaagccacagcacctgatcccgcacccacaccggcagttccagcacctcacacct
attaaggcaacgtggcatcctcgctatgacctcattgtagcaggtcgctacccagaccct
aagttccctgggtacacggtgaatgagctacgaactgttgatgtattcgacggaaacacg
ggggagatggtttgtcaactccacgatccaaatgcttctggtatcatctcgctcaataaa
tttaaccctatgggagacacgctggcttctggcatgggctttaatattctgatctggagc
cgggaggagatggtggccaagaagcaagaacatcttttgaaagccatgacagaacagggg
attggaagctggagtttgtccagacgtggagggcagaggcaggcaaaccctggaacaagc
aagctcaaagctaacttactgtcttgggagctggaggagatgagaacaaaaaccaacgat
tctaaatcacagggaaggaagagaaaagggaaggacctagagaactga
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integrated database retrieval system
