Nestor notabilis (Kea): 104410330
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Entry
104410330 CDS
T08494
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
nnt
Nestor notabilis (Kea)
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nnt03036
]
104410330 (CHD6)
Chromosome and associated proteins [BR:
nnt03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104410330 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Chromo
Helicase_C
ResIII
DEAD
HDA2-3
MUN
BRK
Motif
Other DBs
NCBI-GeneID:
104410330
NCBI-ProteinID:
XP_010018769
LinkDB
All DBs
Position
Unknown
AA seq
2667 aa
AA seq
DB search
MIMKIQKKEKQPPSLKALSRSPMSDAWECKAQDPFASSEEQDDVSHHQVTVTATATGGQC
QCPEEEPDGASQKRTSTQNGMQDTGGGGMGVKKKRKKKDLGEQDGGEKAAVEVKPKRRRE
PKEPKEPKKAKEPKKPKEPKQREVVKKPRKPREPKAPKEPKDKKSGSEPGPRARAKKSSK
DTPVEKKKKGKRKNEIPVDSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNE
DLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKETHP
GGLAFEMEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDED
LFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEA
LQIPPEIKHMERPASESWQKLERSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEM
GLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQM
IQQYEMVYRDTQGNPLPGMFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNC
KLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQV
KKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQ
HNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAAGKLVLI
DKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKP
DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLI
TRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQXXXXQQLSKMEVEDLLRKGAYGA
LMDEEDEGSKFCEEDIDQILQRRTQTITIQTEGKGSTFAKASFVASGNRTDISLDDPNFW
QKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSR
RFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVK
HYKGDEKIKSFIWDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKNADW
LATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPASAEADK
SLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGVGDGAQDTAERGCMEKEE
SSGEKLEGLPKQEVSPQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPPRAEMLM
PGNHGYWLQDEMFRRASEMDSVNKEMQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQ
FRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGPPDPDIYVEPITEERAARTLY
RIELLRKVREQVLKCPQLHERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYI
MNDPQLSFLDAYRNYAQNKRTGLPAPETLCCLYQTNSKLYSSPLYSQVDRTCESLENEAE
SQIKLEAVDNTVSQAGGSPPDANCETFMSKVQDIMSINYDESSLPDSLVCMMYDEKACNS
EQSSLARDSPSCPDVGISVAKLSEGKLEGDEDPSSCDVDAMRETPFLEGLQVGCDRMDSQ
NEEVEPSPSTPESDPSQSVPAELCEALQRKGDLTSPAPVLPEHTAMEGVISMGLYSPTLH
NYEIKVPPEQRFINLLQEKGTETKSGPSQSHSEEDEEEEEDDDNSETAADAVEILSTPRT
RAGCDPEANELGGEEQSSGLRTPEDTCPDVNGERESLGLGTPEGLGEPGPGGREDHGLDE
ENTLQHSPGQSHGQAFSLPAPMLGVPGAEPPRAGREAWGRRAEGQTGCREALHHDPQGVK
QEERENRDEGEKASSSQSQDGSEKYMEEETKNSSSVLPREIDDLQDARAPTIAQLLQEKT
LYSFSEWPKDRVIINRIDNICHAILKGKWPSSSQQFETPTLLTAPAVASNTSSRNSFAES
EPSDPSFNNGVLISQVQKEGFLTPAFAKDERKHRRPYEFEMERDAKQRSLEQLAATHVHP
PIVLNGWRDTAVDLSRASDGSPGNSSPFPLNTNMPKLGTVNTLQGSLGMDLSGILQAGLI
HPVTGQIVNGSLRRDDAAMRRRRGRRKNVEGMDLIFLKERPLPTRLQDVQEDQPQPPQNS
PLPDGPVAATSTPQPVPAAGSQAEKAVPNKSLLDWLRQQSDYTLEVPSFGTSFSDKPKQR
RQRCKDPSKLDISSLSGEERVPVVHKGTGRRGYLPESKFNRILTEPVLRDTGPRRRGRRP
RSDLIKGPGVVADSSSGMGPLFMNGLIAGMDLVGLQNMRNMQGIPLTGLVGFPAGFAAVP
ASEDVKSTLSMLPMMLPGMATVPQMFGVGGLLNPPMTTTCTATAPTSLTSTTKSGTANAE
KATEDKPSSQDVKKETLTEEKPGPSSFSNQTESAITTSSPVAFNPFLIPGMSPGLIYPSM
FLSPGIGMALPGIQQTRHSEAANLESQKRKRKKAKGESANPEPETVPLPEKEAANSQNCT
EQTPPSSAEKEQEGPAEPEREAARDPN
NT seq
8004 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaaaaaagaaaagcagccgccaagcctaaaagcgctgagccgc
tccccaatgtcggatgcctgggagtgcaaggcacaggacccctttgccagcagcgaggag
caggacgacgtgtcccaccaccaggtgacggtgacggccacagccacgggaggccagtgc
cagtgcccagaggaggagcccgatggggcttcccagaagcggacgagcacccagaatggg
atgcaggacactgggggtgggggcatgggggtgaagaagaaacggaagaaaaaggatctg
ggagagcaggatgggggagaaaaagcagctgtggaggtgaaaccaaagaggaggagagag
cctaaagaaccaaaagagcctaaaaaggctaaagagcccaagaagccgaaggagcccaag
cagagggaggtggtcaagaagccccggaaacctcgggaacccaaagcccccaaggaacct
aaagacaagaagagcggctctgagcctggccccagagcaagagccaagaagagcagcaag
gacacgcctgtggaaaagaagaagaaagggaagaggaaaaatgagataccggtggacagt
ttggatttggatcaggatctcctgagcccatccgtgcagagcccagaggagtctgcagag
tcagccgacagccagaaacgccgctcaggacgacaagtgaagaggagaaagtacaacgag
gacctggatttcaaggtggtggatgatgatggcgagacaatagctgtgctgggagctggg
cgaacctctgcgctctccgcctccactctggcgtggcaggcagaggagcctcctgaggat
gatgccaatatcattgagaagatccttgcctcgaggatggtgcagaaagagactcatcct
gggggactggcatttgagatggaggagttctacgtcaagtacaggaacttctcctacctt
cattgtaaatgggcaactctggaggagctggagaaggaccccaggatctcccagaagata
aagcgcttccgcaacaagcaggctcagatgaagcatatttttacagagcctgatgaagat
ttgttcaacccagactacgtggaggtagatcgaattctggaagtggctcacacgaaggac
cctgacactggggaggaggtgactcattacctggtgaagtggtgctccctgccctacgag
gagagcacctgggagctggaggaggatgtcgacccagggaagattaaagagtttgaagcc
ctccaaatccctccagaaatcaagcacatggagcgcccagcatctgagtcctggcagaaa
ctggagaggtcccgggagtataagaacagcaaccagctgcgggagtatcagctggaggga
atgaactggctgctctttaactggtataacaggaagaactgcatcctggctgacgagatg
gggctgggaaagacaatccagtcaatcaccttcctgtcagagatattcctgatgggcatc
cacggccctttcctcatcatcgctcctctctccaccatcaccaactgggagagggagttc
cgcacctggacggagatgaacgccatcgtgtaccacggcagccagatcagtcggcagatg
atccagcagtacgagatggtgtacagggacacgcagggtaaccctctccctgggatgttc
aagttccaggtggttatcaccacctttgagatgatccttgctgactgtccagagctgaag
aagatccagtggcgctgcgtggtcatcgacgaggcacatcgcctgaagaacaggaactgc
aaactcctggaggggctgaagctcatggccctggagcacaaggtgttgctgacagggacc
ccgctgcagaactcagtggaggagctcttcagcctcctgaatttcctggagccacagcag
tttccctcagagacagccttcctggaggagtttggagacctgaagacggaggagcaggtg
aagaagctgcagtccattctgaagcccatgatgctgcgacggctgaaggatgatgtagag
aagaatctggcacccaaacaagagaccatcattgaggtagagctgaccaatattcagaag
aaatactaccgggccatcctggagaagaacttctccttcctctccaagggtgccaaccag
cacaatatgcccaacctcatcaacaccatgatggagctgcggaagtgctgcaatcacccg
tatctcatcaacggggcggaggagaagatcctggaagacttccgtaaaacacacagccca
gaggcaccagacttccagctgcaggccatgatccaggcggccgggaagctggtgctcatt
gataagctgcttcccaagctgatcgctggtggacacaaggtgctcatcttctcccagatg
gtgcgctgcctcgacatcctggaagactatctcattcagaggcggtacacctatgagcgc
atcgacgggcgggtgcgcgggaacctgcgccaagctgccatcgaccgcttctgcaagccc
gactccgaccgcttcgtctttctcctgtgcacgcgggcgggtgggctgggcatcaacctc
actgctgccgacacctgcatcatcttcgattcggactggaacccacagaacgacctacag
gctcaagctcgctgccaccggatcgggcagagcaaggcagtgaaagtctatcgcctcatc
accaggaactcctatgagagggagatgtttgacaaggccagcctcaagctgggcctggat
aaggctgtgctgcaggacatcaaccgcaagggcagcaccaatggggttcagnnnnnnnnn
nntcagcagctctccaagatggaggtggaggacctgctgcggaagggtgcctacggtgcc
ctcatggatgaggaggatgaaggatcgaagttctgtgaggaagacattgatcagatcctc
cagcgcaggacacagaccatcacgatccagactgaggggaagggctccacctttgccaag
gccagcttcgtagcatcaggaaacagaactgacatttccttagatgatcccaacttctgg
caaaagtgggccaagatagcagagctcgatacagatgccaagaatgaaaaggagagcctg
gtcatcgacaggccccgggtgcggaagcaaaccaaacactacaactcctttgaagaggat
gagctgatggagttctcggagctggacagtgactcggatgagcgacccacacgctcgcgg
cgcttcaacgagaagacacgccggtacctgcgggctgagtgcttccgtgtggagaagaac
ctgctcatattcggctggggacgctggaaagacatcctgacccatgggcggttcaagtgg
cacctgaatgagaaggacatggagatgatctgtcgggccttgctggtctattgtgtcaaa
cactacaagggggatgagaagatcaaaagttttatctgggatctcatcacaccaacaaag
gatggccagaaccaggctctgcagaatcactcaggcttgtcagcaccggtgcccagaggc
aggaaggggaagaagacaaagaaccagatgcttctgcccgagataaagaatgcagactgg
ctcgccacctgcaaccctgaggttgtgctgcatgacgacagctacaagaagcacctcaaa
cagcactgcaacaaggttctgctgcgggtgcgaatgctctactacctgaaggctgaagtg
ctgggtgaagctgcggacaaagccttcgaggggacccctgccagtgccgaagctgacaaa
tccctgctcatcggcgtcttcaagcacggttacgagcggtacaacgccatgcgggcggac
ccggcactgtgcttcctggagaaggtgggaatgccagatgagaagctactctctgcggag
cagggtgttggcgacggggcccaggacactgctgaaaggggctgcatggaaaaggaagag
agcagtggagaaaagctggaagggctgccaaagcaggaggtgagcccccaggatggctcc
gactcagacagatcctgctggcctgtctcatctgctctcacagccagactgcggaggctc
gtcaccgtctaccagcgctgcaaccgcaaagagctgcctccgcgtgccgagatgctcatg
cctggtaaccatggatactggctgcaggacgagatgttccggagagcctccgagatggac
tctgtgaacaaagaaatgcagaaaaggtggaccaggagggagcaggcagatttctaccgc
accgtctcctcctttggggttatctatgaccaggagaaaaagatctttgactgggctcag
ttccgagccatctctcgactggagaagaagacagatgaaagcctggagaagtacttctac
agcttcgtggccatgtgcaagaatgtctgtggtctcccactgtggaaagaggatggtccc
ccagaccctgacatctacgtggagcccatcacagaggaacgtgctgccaggaccctctat
cgcatcgagctgctgcggaaggtgcgtgagcaagtgctcaagtgtccacagctccacgag
cggctcaagctgtgccggcccagcctctacctgcccgtgtggtgggagtgtggcaaacac
gaccgggacctgctcatcggcaccgccaagcacggcctgaatcgcaccgactactacatc
atgaatgacccccagctgtcttttttagatgcatacaggaactatgcccagaataagaga
acggggctcccagccccagaaaccctgtgctgcctttaccagactaactccaaactctac
agttcccctctgtacagccaggtggaccggacttgtgaatccctggagaatgaagccgag
agtcagatcaagctggaagctgtagacaacactgtgtcccaggctgggggcagtccaccg
gatgcaaactgtgaaacgttcatgtctaaagttcaggacatcatgtccattaactatgat
gagagctctttgccagactcgttggtgtgcatgatgtatgacgagaaggcctgtaacagt
gagcaaagctcccttgctcgagacagcccaagttgcccagatgttggaatcagcgttgct
aaactctctgagggcaagctggagggggacgaggatccgtccagctgcgatgtagatgcc
atgagagagactcctttcctagagggtttgcaagtgggctgtgaccgaatggacagtcag
aatgaggaagttgagccttcaccttctacccctgaaagcgacccttcacagagtgtccca
gcagagctctgtgaagccttgcagcggaagggagacctcaccagccctgcaccagtgctg
cctgagcacactgccatggaaggggtcataagcatggggctctacagtcccactcttcat
aactatgaaatcaaggttcctcctgagcagaggttcatcaatctgctgcaggagaaagga
acggagacaaagtcagggccaagtcagagccacagcgaggaagatgaggaggaagaagag
gatgatgataactctgagacagcagcagatgctgtagaaatcttgagtactcccaggacc
agggctggctgtgaccccgaggccaatgaactggggggtgaggagcagagctctggcctc
cgcacacccgaggacacttgcccagatgtgaatggcgagagagagtccctggggctgggg
acacccgaagggctgggggagcctgggccagggggcagggaggaccatggcttggatgag
gagaataccctgcagcactcaccaggacagagtcatggccaggctttcagcctgcctgca
ccaatgctgggggtcccaggggcagagcccccccgtgctgggcgggaggcctggggccga
agagctgaggggcagacaggctgcagagaggccctgcaccacgatccccagggggtgaag
caagaagagcgtgagaacagagatgagggggagaaagccagcagcagccagagtcaagat
ggttcagagaagtacatggaggaagagaccaagaattcttcctctgtcctgcccagggag
atcgatgaccttcaggatgcccgggcaccaaccatagcccagctgttgcaggagaagaca
ctttactccttctctgagtggcctaaagaccgtgtgatcatcaaccgcattgacaacatc
tgccatgccatcctgaagggcaagtggccttcctccagccagcagtttgagacaccaacc
ctgctgacagctccagcagttgccagcaacaccagcagcaggaacagctttgccgagtca
gaaccctctgaccccagcttcaataacggggtgttaatctcacaggtacaaaaggaaggt
ttcctgacccctgcctttgcaaaggatgagcggaagcacaggaggccctatgaatttgag
atggagagagatgccaaacagaggagcttggagcagctggcagcaacccatgttcatcca
cccattgtgctgaatggctggcgtgacacagcagtggacttgtccagagcctctgatggg
tccccggggaactcctctcctttccccctgaacacaaacatgcccaaactggggactgtg
aacacccttcagggctccctgggcatggacttgtctggcatcctccaggcagggttaatc
catcctgtcacgggacagattgtgaatggcagcctccggagagacgatgctgccatgagg
aggagacggggcaggagaaaaaatgtagaagggatggacctcatcttcttgaaggagagg
cctcttccaaccaggctgcaggatgttcaggaagaccagccgcagccccctcagaacagt
cccctccccgatgggccggttgctgctacctcaactccacagccagtcccagctgcaggc
agccaagcagagaaggctgtcccgaataagagtctcctcgactggctccgtcagcagtcc
gactacacactcgaagttcccagctttggcacaagtttttcagacaagcccaagcagagg
aggcaacgctgcaaggaccccagcaaattggacattagctcactctcgggagaggagcgg
gtgcctgtggtacataagggtaccggacggcggggctacttgccggaaagcaagttcaat
cgcatcctgaccgagcccgtgctccgggacacggggccccgccgcagggggagaaggccc
cgaagcgacctcattaaaggccctggcgtggtagcagattcttcctctggaatgggacca
ttgttcatgaacggactgattgctgggatggatctggtaggacttcagaacatgagaaac
atgcaagggatccccctgactgggctggttggctttcctgctggatttgcagcagtgcct
gccagcgaggacgtgaaaagcaccctgagtatgttgcccatgatgctgccgggcatggct
accgtgccccagatgtttggcgttggaggactcctcaacccccccatgacaactacttgt
actgcaactgctccgacttcgttaacaagcacaacgaaaagtggtacagccaacgcagag
aaagctactgaggataaaccgagtagccaggatgtgaaaaaagaaactctcacggaagag
aagcctggtcctagttcgttttctaatcagacagaatctgcaataactaccagtagtcct
gtagcttttaacccgttccttatcccagggatgtctcctggactgatctatccctcgatg
tttctttcccctggcatcggcatggcgctgcccggcatacagcagaccaggcactcggag
gcagccaacctggaaagccagaagcggaagagaaagaaagcgaaaggggagtcggcaaac
ccagagccagagactgtcccactgccggagaaggaagctgcaaacagtcaaaactgtaca
gagcaaacaccaccatcctcggcagagaaggagcaggagggaccagcggagccggagcgc
gaagcggctcgcgatcccaattag
DBGET
integrated database retrieval system
