Nostoc sp. NIES-3756: NOS3756_08540
Help
Entry
NOS3756_08540 CDS
T04170
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
non
Nostoc sp. NIES-3756
Pathway
non03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
non00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NOS3756_08540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
non03400
]
NOS3756_08540
Enzymes [BR:
non01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NOS3756_08540
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NOS3756_08540
DNA repair and recombination proteins [BR:
non03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NOS3756_08540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
BAT51923
LinkDB
All DBs
Position
984743..985579
Genome browser
AA seq
278 aa
AA seq
DB search
MPELPEVETVRQGLNQLTLNQKITGGDVLLHRTIAHPFSIGEFIHGITGSTISTWHRRGK
YLLAELSPTFGWLGVHLRMTGQLLWLNQAEPLHKHTRVRIFFENQQELRFVDQRTFGQMW
WVPPGVAVESVITGLGKLAVDPFSPEFTVEYLAAKLHNRRRPIKTALLDQSVVAGLGNIY
ADEALFKSGVLPETLCTDVQPKQIELLRTAIIQVLETSIASGGTTFSNFLNVKGVNGNYG
GVAWVYNRAGEPCRVCGDVIQRIKLGGRSSHFCLQCQR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgcctgaagttgaaacagtccgtcagggtttaaatcaattaaccctgaac
caaaaaattacgggtggagatgtgttgcttcatcgcaccattgcccaccctttttctatt
ggtgaatttattcatggtattactgggagtactattagtacttggcatcgtcgcggtaaa
tatcttctcgctgaactttctcccaccttcggttggctaggtgtgcatctgaggatgact
ggtcaattactttggttaaaccaagcggaacctttacacaaacatacgcgggtaagaata
ttttttgagaaccaacaggaattgaggtttgttgaccaaagaactttcggtcaaatgtgg
tgggttccgccgggagtggctgtagaaagtgtgattactggtttaggtaaactagctgta
gaccccttttcaccagaatttactgttgaataccttgctgctaaactgcataatcgtcgc
cgtcccatcaaaacagcactactagatcagtctgttgtggcggggttaggaaatatctac
gctgatgaagcactgttcaaaagcggcgtgttaccagaaactctatgtacagatgtgcaa
ccaaagcaaattgaacttttgcgaacagccattattcaagtgctagaaaccagcattgca
tctggaggtacaacttttagtaatttcctcaatgttaagggagttaatggtaattatggt
ggtgtcgcctgggtatataatcgtgcgggagaaccatgtagagtttgtggcgatgtcatt
caacgcatcaaattaggtggaagatccagtcatttttgcctacagtgtcaaagataa
DBGET
integrated database retrieval system
