Nostoc sp. PCC 7524: Nos7524_2292
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Entry
Nos7524_2292 CDS
T02363
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nop
Nostoc sp. PCC 7524
Pathway
nop03030
DNA replication
nop03410
Base excision repair
nop03420
Nucleotide excision repair
nop03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Nos7524_2292
03410 Base excision repair
Nos7524_2292
03420 Nucleotide excision repair
Nos7524_2292
03430 Mismatch repair
Nos7524_2292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nop03032
]
Nos7524_2292
03400 DNA repair and recombination proteins [BR:
nop03400
]
Nos7524_2292
Enzymes [BR:
nop01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Nos7524_2292
DNA replication proteins [BR:
nop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Nos7524_2292
DNA repair and recombination proteins [BR:
nop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Nos7524_2292
NER (nucleotide excision repair)
GGR (global genome repair) factors
Nos7524_2292
MMR (mismatch excision repair)
DNA ligase
Nos7524_2292
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Nos7524_2292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
RNA_pol_A_CTD
Auto_anti-p27
zf-NADH-PPase
HMA
Motif
Other DBs
NCBI-ProteinID:
AFY48135
UniProt:
K9QR79
LinkDB
All DBs
Position
2791262..2793298
Genome browser
AA seq
678 aa
AA seq
DB search
MIQIQPEVKRIAELRQLLQQASYAYYVLDAPIMEDAVYDQLYRELQQLETQYPELVTPDS
PTQRVGEKPATHFTSVRHNIPLYSLENAFNLEELQAWDQRWRRQLPPTDSAEYVTELKID
GSALALTYQNGILIRGATRGDGEMGEDITQNVRTIRSIPLRLNFDGLENIERIEVRGEAF
LPLEVFQYINERRQKAGEQLFANPRNAAAGTLRQLDSRIVARRRLDFFAYTLHIPGMDDA
SIANTQWEALELLQKLGFRVNSQHQLCHSLAEVADYYKYWDTERLNLPYMTDGVVVKLNS
YKLQEQLGFTQKFPRWAVALKYPAEEAPTRVENIAVNVGRTGALTPLAEMRPVELAGTTV
SRATLHNSDRIAQLDIRIGDTVIVRKAGEIIPEVVRVLKELRPDHTEPFVMPTHCPVCGQ
PVVRETGEAVTRCVNASCAAILKGSIEHWVSRDALDIKGVGEKLVHQLVDKGLVHSVADL
YDLTTEQLFALERMGQKSAEKLIEAIAQSKNQPWSRVLYGLGIRHVGSVNAQLLSEKYRH
VEQLATAKQSDIEGIYGIGAEIAQSVYQWFRIDANQILIERLQAAELQFANTEETPTIDN
ANVNLAGKTFVVTGTLPTLKRDEAKTLIQQAGGKVTDSVSKKTDYLVVGEDAGSKLTKAQ
ALGIAQLTEAQLLEMLAN
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgatacagattcaaccagaagtcaagcgcatcgcagaactgcgccaactgttacaacaa
gctagttatgcttattatgtcttagatgcacccatcatggaagatgcagtttatgaccaa
ctgtatcgagaactgcaacaactggaaactcaatatccagaattggtaacaccagacagc
cctactcagcgtgtcggggaaaaaccagctacacactttacctctgtgcggcacaatata
cccctgtatagtctagagaatgcctttaatcttgaagaattgcaagcatgggatcaacgt
tggcgcagacaattaccaccaacagactcagccgaatacgttacagaactgaaaattgat
ggttcggctttggcattaacttaccaaaatggcattctcattaggggtgcaactagggga
gatggggaaatgggggaagatatcacccaaaatgtgcggacaattcgctccattccctta
cggttaaattttgatggcttagaaaatatcgaaagaatagaggtacggggagaggctttc
ttacctctggaagtgtttcaatacatcaatgaacgcagacaaaaagcgggagaacaatta
tttgccaatcctcgtaacgccgcagccgggacactgagacaattagactctcgcattgtg
gcgcgacgacggttagattttttcgcctacaccctgcacattccggggatggatgacgcg
agtattgccaatacccaatgggaagctttggaattgttgcaaaagttggggtttcgggtg
aactcccagcatcagctttgtcattctctcgctgaagttgcagactattataaatactgg
gatacagaaagactcaacttaccctacatgactgatggggtggtggtcaaattaaattcc
tataagttgcaagaacagttaggttttacccagaagttcccccggtgggctgtggcgctg
aagtatcccgccgaagaagcgcccacccgtgtagaaaatattgccgtgaatgtgggacgc
acaggagctttaacgccgttggcagaaatgcgtcccgtggaattagcgggaactacagta
tcacgagctaccttacataatagcgatcgcatcgcccaattagacatccgcatcggtgat
actgtgattgtccgcaaggctggggaaatcatcccggaagttgtgcgggtactgaaagaa
ctgcgcccagatcataccgaaccctttgttatgcctacccactgcccagtctgtggacag
cctgtggtacgggaaacaggggaagcggtaactcgctgtgtcaatgcttcctgtgctgcc
atcctcaaaggttcgattgaacattgggtaagccgggatgctttagatattaaaggtgtg
ggagaaaaattagtccatcaattggtggataaagggttggtgcattccgttgcggattta
tatgacttgacaacagagcaattatttgcattggaaagaatggggcagaaatcagccgag
aaattaatcgaagcgatcgcccaatcgaaaaatcagccttggtcaagggtattatacggt
ttaggcatccgtcatgtcggcagcgtcaacgctcaattattaagtgaaaagtatcgccat
gtagaacagttagcaacagccaagcaatcagatattgagggtatttatggcataggtgca
gaaattgcccagtctgtttatcaatggtttcgcatagatgccaatcaaattttaatagag
cgtttacaagcagcagagttacaatttgcaaacaccgaagaaacaccaactattgataat
gctaatgtcaacctagcgggtaagacttttgtcgtcacaggaaccttgcccactttaaag
cgtgatgaagctaaaactttaattcaacaagctggtggaaaagtcactgattccgtgagt
aaaaaaaccgattatttggttgtgggtgaagatgcaggttctaaattaacaaaagcccaa
gctttgggaattgcacagttaacagaggcgcagttattagaaatgttggctaattag
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