KEGG   Natronococcus occultus: Natoc_2554
Entry
Natoc_2554        CDS       T02426                                 
Name
(GenBank) LSU ribosomal protein L24A
  KO
K15172  transcription elongation factor SPT5
Organism
nou  Natronococcus occultus
Pathway
nou03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:nou00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    Natoc_2554
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nou03021]
    Natoc_2554
   03019 Messenger RNA biogenesis [BR:nou03019]
    Natoc_2554
Transcription machinery [BR:nou03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     Natoc_2554
  RNA polymerase I system
     Natoc_2554
Messenger RNA biogenesis [BR:nou03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     Natoc_2554
SSDB
Motif
Pfam: Spt5-NGN KOW DUF6093 Glyco_hydro_65C
Other DBs
NCBI-ProteinID: AGB38318
UniProt: L0K2K6
LinkDB
Position
2451705..2452142
AA seq 145 aa
MGIYAVKTTASQERTVAEMIINREEPEIHAALAPDSLTSYVMVEADGDAVINRVLEDIPH
ARSMVPGKSDISEVEHFLSPKPDVEGIAEGDIVELIAGPFKGEKAQVQRIDEGKDQVTVE
LYEATVPIPVTVRGDQIRVLDSDER
NT seq 438 nt   +upstreamnt  +downstreamnt
atgggcatctacgcagtcaagacgacggccagccaggagcgcaccgtcgccgagatgatt
atcaaccgcgaggagcccgagattcacgccgcgctcgcgcccgactcgctgacctcctac
gtgatggtcgaagccgacggcgacgccgtgatcaaccgcgtgctcgaggacatcccccac
gcgcgcagcatggtgcccggcaagtccgacatctcggaggtcgagcacttcctctcgccg
aagccggacgtcgaggggatcgccgagggcgacatcgtcgagctcatcgccggcccgttc
aaaggcgagaaggcccaggtccagcgcatcgacgaaggcaaggatcaggtgacggtcgaa
ctgtacgaggcgacggttccgatcccggtgacggtacggggcgaccagattcgcgtgctc
gacagtgacgaacggtag

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