Novosphingobium sp. P6W: TQ38_000905
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Entry
TQ38_000905 CDS
T05550
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
nov
Novosphingobium sp. P6W
Pathway
nov00020
Citrate cycle (TCA cycle)
nov00640
Propanoate metabolism
nov00660
C5-Branched dibasic acid metabolism
nov01100
Metabolic pathways
nov01110
Biosynthesis of secondary metabolites
nov01120
Microbial metabolism in diverse environments
nov01200
Carbon metabolism
Module
nov_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nov_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TQ38_000905
00640 Propanoate metabolism
TQ38_000905
00660 C5-Branched dibasic acid metabolism
TQ38_000905
Enzymes [BR:
nov01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
TQ38_000905
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
Antimicrobial_8
Motif
Other DBs
NCBI-ProteinID:
AXB75233
UniProt:
A0A2Z5E6I9
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All DBs
Position
1:174494..175693
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AA seq
399 aa
AA seq
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MNIHEYQAKELLSKYGVGIPAGIAALTVEEAVAAAKQLPGPLYVVKAQIHAGGRGKGKFT
ELPADAKGGVRLAKSIDEVEAFAKEMLGNTLVTIQTGDAGKQVNRLYVTDGVDIEKEYYL
SMVVDRSTSRVAMIVSTEGGMDIEEVAHSTPERISTITVDTATGFQAHHGRAVAFALKLS
GDLAKQAQKIAKQLYEAFVALDCDMLEINPLVETKDGNLLVLDTKMSFDSNALYRHPDVL
ALRDETEEDPAEVEASKYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGMFPANFLDVG
GGANKEKVTAAFKIILADPAVKGILVNIFGGIMKCDVIAEGIVAAAKEVNLQVPLVVRLE
GTNVQQGKDILAGSGLPIVAANDLGDAARKIVAEVKNVA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaacattcacgaatatcaggccaaggaactgctgtcgaagtatggcgtgggtatcccc
gccggcatcgccgcgctgaccgtagaggaagcggttgccgccgccaagcagctccccggg
ccgctctacgtcgtgaaggcgcagatccacgccggcggacgcggcaagggcaagttcacg
gaacttcccgctgacgccaagggcggcgtgcgtctcgccaagtcgatcgacgaagtcgag
gcatttgccaaggaaatgctcggcaacaccctcgtcaccatccagacgggtgatgccggc
aagcaggtgaaccgcctgtacgtgaccgacggcgtcgacatcgagaaggaatactacctc
tcgatggtcgtggaccgttcgaccagccgcgtcgccatgatcgtgtcgaccgaaggcggc
atggacatcgaagaggtcgcccactcgacccccgagcgcatcagcaccatcaccgtcgac
accgcgaccggcttccaggctcaccatggccgcgccgtcgctttcgcgctcaagctgtcg
ggtgatctcgcaaagcaggcgcagaagatcgccaagcagctttacgaggcgttcgtcgcc
ctcgattgcgacatgctggaaatcaacccgctggtggaaaccaaggacggcaacctgctg
gtcctcgacaccaagatgagcttcgattcgaacgccctgtatcgtcaccccgacgtgctg
gccctgcgcgacgaaaccgaagaagatcccgctgaagtcgaagcctcgaagtacgacctg
gcctacatcaagctcgatggcgacatcggctgcatggtcaacggtgccggccttgccatg
gcgacgatggacatcatcaagctgaacggcatgttcccggccaacttcctcgacgttggc
ggcggcgccaacaaggagaaggtgactgcggcgttcaagatcattctcgcggatcccgca
gtcaagggcatcctcgtgaacatcttcggcggcatcatgaagtgcgacgtcatcgccgag
ggcatcgttgccgcggcgaaggaagtgaacctgcaggttccgctggtggttcgcctcgaa
ggcaccaatgtccagcagggcaaggacatcctggccggctcgggcctgccgatcgtcgct
gccaacgatctgggcgacgctgcccgcaagatcgttgccgaagtgaagaacgtggcctga
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