Novosphingobium sp. P6W: TQ38_006125
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Entry
TQ38_006125 CDS
T05550
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nov03009
]
TQ38_006125
Enzymes [BR:
nov01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
TQ38_006125
Ribosome biogenesis [BR:
nov03009
]
Prokaryotic type
ribosomal protein modification factors
TQ38_006125
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AXB76138
UniProt:
A0A2Z5E9M0
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All DBs
Position
1:complement(1261549..1262931)
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AA seq
460 aa
AA seq
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MAIEIPNPPKVGMVSLGCPKALVDSERILTRLRADGYTMSADYSGADVVLVNTCGFLDSA
KEESLAAIGEAIAENGRVIVTGCMGNEADVIRAKFPQVLAVTGAHQYEAVVEAVHEAAPP
ELSPYVDLIPHAYDEAGVKLTPRHYSYLKISEGCNHACSFCIIPSLRGKLASRRIDAVLR
EAEKLVQAGTRELLVISQDTSAYGVDVRHEERMWKDHSVRTHMTDLARELGQLSDSQGRR
PWVRMHYVYPYPHVDAVIPLMAEGLLTPYLDIPFQHAAPSVLKAMKRPANEAKVLGRLRN
WREICPDIAIRSSFVVGFPGETEADFEYLLDWLEEAQLDRVGAFRFEQVEGAAANNLPGA
VPEEVKEERYARIMEKTAAISAAKLQAKVGRKLQVIIDEIGDADEEGDIGATGRSQADAP
EIDGNVFLRDVGGALQVGDIVEVIVEDADEHDLYGVIDAA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcaatagaaatccccaatccgcccaaggtcggcatggtcagcctcggctgccccaag
gcgctcgtagattccgagcgtatcctcacgcgcctgcgtgccgacggctacaccatgagc
gcggattattccggcgccgacgtggtcctcgtcaacacctgcggtttccttgattccgcc
aaggaagaaagccttgccgccatcggcgaggcgatcgccgaaaacggacgcgtcatcgtg
accggctgcatgggcaacgaggccgatgtcattcgcgccaagttcccacaggtcctcgcc
gtcaccggcgcgcaccagtatgaggcggtcgtcgaggccgtccacgaggctgcgccgccg
gaactgtcaccttacgtcgacctgatcccgcatgcctatgacgaggccggcgtgaagctg
acgccgcgccactacagctacctcaagatttccgaaggctgcaaccacgcctgctccttc
tgcatcatcccgtcgttgcgcggcaagttggcaagccggcgcatcgacgccgtgctgcgc
gaggcggaaaaactggttcaggccggaacacgcgaactgctggtcatcagccaagacacc
tcggcctacggcgtcgacgtccggcacgaagaacgcatgtggaaggaccattccgtccgc
acccacatgaccgacctcgcgcgcgaactcggtcaactgagcgattcgcagggccgccgt
ccctgggtgcgcatgcactacgtctacccctacccccacgtcgacgcggtgatcccgttg
atggcggaagggctcctgacgccgtacctcgacattccgttccagcacgccgcgccttcg
gtgctcaaggccatgaagcgccccgccaacgaggcgaaggtgctgggccgcctgcgcaac
tggcgcgaaatctgcccggacatcgcgatccgctccagctttgtcgtcggtttccccggc
gaaaccgaagcggacttcgaatatctgctcgactggcttgaagaagcgcagctcgaccgg
gtcggcgcgtttcgcttcgagcaagtggaaggcgcagccgccaacaacctccccggcgcc
gtgccggaagaggtcaaggaagagcgctacgcccgcatcatggagaagaccgccgcgatc
agcgcggccaagctccaggccaaagtgggccgcaagctgcaagtcatcatcgacgaaatc
ggcgatgcagacgaagaaggcgatatcggcgcaaccggccgctcgcaggctgacgccccg
gagatcgacggtaacgtgttcctccgcgatgtcggcggcgccctacaagttggtgatatc
gttgaagttattgtcgaggatgctgacgagcacgacctttatggcgtgatcgacgcagcc
tga
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