Neofusicoccum parvum: UCRNP2_6508
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Entry
UCRNP2_6508 CDS
T03126
Name
(GenBank) putative dna-(apurinic or apyrimidinic site) lyase 1 protein
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
npa
Neofusicoccum parvum
Pathway
npa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
npa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UCRNP2_6508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npa03400
]
UCRNP2_6508
Enzymes [BR:
npa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
UCRNP2_6508
DNA repair and recombination proteins [BR:
npa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
UCRNP2_6508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP_endonuc_2
DUF5899
Motif
Other DBs
NCBI-ProteinID:
EOD46765
UniProt:
R1G5N8
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MAGSSSDLSPPPAATEVTPPDTLATAPPAKSEASATKTQSRKRGSEEVTASAKRTKRTTR
GAAQPSYAEESEEEIEQVTKTTPKKRAAAQDSKKAGVKKEAKVKAEVEAEVEIKPVADKK
TGKKTKAKVKAEEEELKAEDQDDGATAKKTPRKRKTKEEKEADMVPLAARTVGSKLFVGA
HVSAAGGVQNAVSNSVHIGGNAFALFMKSQRKWANPPLATEATKMFKSQCNHHKYDSAKH
VVPHGSYLVNLAHTDSDRAKQAYDSFADDLSRCEKLGIKLYNFHPGNAASSTREEALQQL
ATQLNQAHKDPSTGDVITLLETMAVFDGNTIGGTFEELAAIIALVDKKDRVGVCLDTCHI
FAAGYDIRTPDTFAETMEKFDSVIGLSYLRALHVNDSKAPLGSGRDLHANIGTGFLGLRA
FHNIMNDARLQGLPMVLETPIDAPDPQNPKKNVEDKGVWVYEIKLLESLVGMDAESEEFK
KLDEELQERGKGERERVQDQVDRREEKKKTKTEKGGKKKAAVTVKNMFAKAKGKKGKKAS
DESSEASDEES
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctcatcctcagacctgtcacctccacctgctgcaacagaagtcacgcccccg
gataccttagctactgctccgcctgcgaagagtgaggcctctgccacgaagactcagtct
agaaagcgcggttcggaggaagtcacggcctctgcgaagaggacaaaaagaacgactcga
ggagccgctcaaccaagttacgcagaggagagcgaggaagaaattgagcaagtcaccaag
accacgccaaagaagcgggctgcagctcaggacagcaagaaggcaggcgtcaagaaagaa
gcgaaggtcaaggctgaggtcgaagctgaggtggaaatcaagcctgtagctgacaagaag
actggaaagaagacgaaagctaaggtcaaggccgaagaggaggagcttaaggcagaagat
caagacgacggcgctaccgccaaaaagaccccacgtaagcgtaagaccaaggaagaaaag
gaggccgatatggtgccactggccgcgaggactgttggcagcaagctgttcgtcggcgcg
catgtcagcgctgcaggaggcgttcagaatgcagtatcgaactcagtgcacattggcggc
aatgccttcgcattattcatgaagtcacagcgcaaatgggcaaatcctcccttggccact
gaagccaccaagatgttcaaatcacagtgcaaccaccacaagtacgacagcgccaagcac
gtcgtcccccatggatcctatctcgtgaacctggcacacacggattccgacagagcaaag
caggcctacgactccttcgccgatgatctctcccgctgtgaaaagctcggcatcaagctc
tacaacttccaccccggcaacgccgccagctccacgcgcgaggaagccctccaacagctc
gccacccaactcaaccaagcccacaaggacccctccaccggcgacgtgatcacgctcctg
gagaccatggccgtcttcgacggcaacacgatcggcggcaccttcgaagaactcgccgcc
atcatcgccctcgtcgacaaaaaggaccgcgtcggcgtctgcctcgacacctgccacatc
ttcgccgccggctacgacatccgcactcccgacaccttcgcggagacgatggagaagttc
gactccgtcatcggtctctcctacctcagggccctgcacgtcaacgactccaaggcaccc
ctcggctccggccgcgacttgcacgccaacatcggcaccgggttcctgggtctgcgcgct
ttccacaacatcatgaacgatgcgcggctgcagggcctgcccatggtgctggagacgccg
attgacgcgccggacccgcagaatccgaagaagaacgtcgaggataagggcgtgtgggtg
tatgagatcaagttgctggagagcctggtcggaatggatgccgagagcgaggagttcaag
aagctggatgaggagctacaggagcgtgggaagggtgagagggagagggtgcaggatcag
gtggatcgaagggaggagaagaagaagacgaagactgagaaaggcgggaagaagaaggct
gctgtgacggtgaagaacatgttcgctaaggcaaaggggaagaaggggaagaaggctagc
gatgagagctcggaagccagtgacgaggagtcgtga
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