Nothoprocta perdicaria (Chilean tinamou): 112945694
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Entry
112945694 CDS
T07556
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03250
Viral life cycle - HIV-1
npd04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112945694 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
112945694 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npd03400
]
112945694 (SAMHD1)
DNA repair and recombination proteins [BR:
npd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112945694 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
112945694
NCBI-ProteinID:
XP_025893134
Ensembl:
ENSNPEG00000003394
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MLLELPARALHSARACHAAERLTVLACLSQLEQQHVDIMKVFNDPIHGHIEIHPLLVRII
DTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSLGVGYLAGCLVRALKERQPELDITQRDI
LCVEIAGLCHDLGHGPFSHMFDGRFIPLVRPNLKWKHESASVEMFEHLITSNKLEKVMED
YGLVLQEDMNFIKEQIGGPIDENTREKSWPYVGRPKEKSFLYEIVANKKNGIDVDKWDYF
ARDCHHLGIQNNFDYKRLLKFTRVCEVNSQKLICTRDKEVGNLYDMFHTRNCLHRRAYQH
KVGNIIEIMITEALQKADPYFKIEGSKGTPYRISTAMEDMEAYTKLTDHVYLEILHSSCP
ELAEAREILRKIERRELYKFLGDTHPEKGKEIAKDEFHGLTEEIASSRPEKNPPLVEPKA
EDFIVDVINMDYGMEEQNPIDKVLFYCKADPTKAVRITKEQVSKLLPETFAEQVIRVYCK
NQDPDTVSAAKQYFIQWCIRRDFTKPQDCDVVAPHLTPMKKSWNNIQEAECRTAAEPSCK
QRLPFDE
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcgagctgcccgcccgcgccctgcacagcgcccgcgcctgccacgcagctgag
aggctgacggtgctcgcgtgcctgagccagctggagcagcagcacgtggacatcatgaag
gtcttcaatgatcccattcacgggcacatagaaatacatcctcttctggtgcgcatcatt
gacacccctcagttccagcgcctccggtacattaagcagctgggtggcacctactttgtt
tttccaggagcctctcacaaccgcttcgaacactccttgggggtaggctacctagcaggg
tgtctggttcgtgcgctgaaggaaagacaaccagaactggatataacccaacgagacatc
ctctgtgttgaaattgctgggctttgccatgatttgggtcacgggccattttcacacatg
tttgatgggagatttattccgcttgttcgtccaaatttgaagtggaagcatgaaagtgcc
tctgtggagatgtttgaacacctcatcacttccaacaaactagaaaaagtcatggaagat
tacggtcttgtcctgcaagaagatatgaactttatcaaggaacaaataggagggcctata
gatgaaaacactcgtgagaaatcgtggccttatgttggtcgaccgaaggagaaaagtttc
ctttatgagatagtagcgaacaaaaaaaatggcattgatgttgacaaatgggattatttt
gcaagggactgccatcacctgggaatccagaataactttgattataagcggttgcttaaa
ttcacacgggtgtgtgaggtgaacagccagaagctgatctgcacgcgggacaaggaagtc
ggaaacctgtacgatatgttccacacacggaattgcctccaccggcgcgcgtaccagcac
aaagttggcaacatcattgagataatgattacagaggcccttcaaaaagcagacccgtat
tttaagatagaaggctctaaaggaacaccctaccggatttccacagccatggaggatatg
gaagcctacaccaagctaactgatcacgtctacctggagatcctgcactccagctgtccg
gagctggccgaggcacgggaaattctgcgaaaaatcgagcgccgggagctctacaagttc
ttaggagacactcatcccgaaaaggggaaggagattgcaaaggacgaattccacgggctg
acagaggaaattgccagttccaggcctgagaagaatcctccgttggtggagccgaaggct
gaagacttcatagttgatgttatcaatatggactatggaatggaagaacagaaccccatt
gataaagttctcttctactgcaaagctgatcctaccaaggcagtgcggatcactaaagag
caggtctcgaagcttttacctgagacttttgcagagcaggttattcgggtttattgcaaa
aatcaggatccagatactgtttcagctgcaaaacagtattttattcagtggtgtatcagg
agggatttcaccaaaccacaggactgtgatgtggttgcccctcatctaactccaatgaag
aaaagctggaataatattcaagaggctgaatgcagaactgctgcagaacccagctgcaag
caaaggcttccttttgacgagtaa
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