Nothoprocta perdicaria (Chilean tinamou): 112948940
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Entry
112948940 CDS
T07556
Symbol
AFF1
Name
(RefSeq) AF4/FMR2 family member 1
KO
K15184
AF4/FMR2 family member 1
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npd03021
]
112948940 (AFF1)
Transcription machinery [BR:
npd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
112948940 (AFF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
112948940
NCBI-ProteinID:
XP_025897069
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MASTVNQSTTNGLYNEERNLLRIRERERRNQEALQERDTFPENAPLFAEPYKTNKEDELS
SRIQNMLGNYEEVKELISTKSHQDLIGVPKSVVPLMPQGRPDRPFFHDKTSHTLAPPFQP
AARPQPMGPPAVAPPPPSHLVPYQKPQSRTQPAPGLHTKAPSLPSSRSQGPEPGRGGQES
HAGPRHKRNDRRVVGEARSEELQASLSELSPLLSSLSSPVAPLSPLHSSQRINSRPQKSH
RSHGPSYSQPKSPQEPGPGAQEGESRDGSAVNPAGPAQPPSQAFPPPLPSKTSAMQQKPT
AYVRPMDGQDQAPVESPELKPLAEEFPGEAYEKISELKASAKAKLSKLKIPSEPIEQTFP
GDVHCVEEILKEMTHSWPPPLTAIHTPSTAEPCKFPFPSKDSQHVGSVAQNQKQYDAPSK
TLPNSQPRTSMLQDDLQLSDSEDSGDDQVVAKPPASFAPPRAPPSQPQSVASAHSSSAAS
GSTSDSDTSSDSETESSSSDSEANDGARPPAPEPDPPTSNKWQLDNWLTKVNPPAVPTES
PGELGHTDGHEENKEQGRSISSNSSHERPGPKEPHPKSSSRAGRAPQDAHLASKRSGHKS
PARSEEPSQRHTVGIKRPSKVPAHEGPKGGLKVESEPAPYEAQDPSSRDKPKVKTKGRPR
SGDKKESKATSQEPSENRKHKGSHQASSKGFLDPKPVRDALAGSTQEHLPVSPLAQSQGT
PPRTSGTKAAAVGREDFHRDKFPLPVREKTLLSPVRDFPLPHALVVKIELALLSRIPRPP
GKGSRQRKAEAKELLGARRQDLERKSTDPPDKSFKKRKREMEKESDRKKMKSDKETKSLQ
SSTHKDSSKLKVSKASLDMQRRDVLLPPPLPPPAPAHPAPKAPKGAQKRPRSESDEQPAP
DSTAKNKSSHKDPLSSKHRKVDKYPEQPKSNKESAGDVTNPFPVPSLPNGTSQPRRPQVK
FEKQHSIEHYIEEAKRLKHKADAMTDKVGKAFQYLDAALAFIEYGIAIESDTAAPKSAYS
IFADTMDLIKFIMTLKPFMDSSASSQEKIFAVLCMRCQAVLHMAMFRYKKDTAVKYSRIL
NDHFKSSSRVSQAPSPCVARSSGTPSPLSPMPSPASSGGSQPGSNASGGSLGAAVSVPSN
IPVITSSYVNITSYVLYAYDIWEHADALARRNKDFFDELSTAGCALALNSSLAELVHYTR
QGLQWLRLETNTP
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggcatctacagtcaaccagagcaccaccaatggcctgtacaatgaggagagaaacttg
ctccgcattcgcgagagagagagacggaaccaggaggctctgcaggagagagacacgttc
cccgaaaacgcccccctctttgccgaaccttacaagactaacaaagaagatgagctgtca
agccgtatccagaacatgctgggcaattacgaggaggtcaaggagctcatcagcaccaaa
tcccatcaggacctgatcggggtcccgaaaagcgtcgttcctctgatgccccaaggcagg
cccgatcgcccgttcttccatgacaagaccagccatacgttagcacctccattccagccc
gcagcccgcccgcagcccatgggacctccagccgtagctcctccgcctccaagccacctc
gttccctaccaaaagccacaatcccggacgcagccggcgccaggtttgcacaccaaagct
cccagcttacccagtagtcgaagccaaggcccagagcccggtcgtggtggccaggagagc
cacgccggccctcgccacaagagaaatgacaggcgggttgtcggcgaggctcgttccgag
gagctgcaggcctccctgtcggagctctctcccttgctgtcatctctgtcctctccggtg
gcacccctgtcgcctctacattccagccagcgtatcaattccaggccacagaagagccac
agaagtcacgggccgtcctacagccaaccaaaatcacctcaggagccagggccaggggcc
caggagggcgagagccgggatggctcagccgtgaacccggctgggcccgctcagcctccc
tcccaggcctttcccccgcctttgccgtcgaaaaccagtgcgatgcagcagaaacctact
gcctacgtgagaccaatggatggccaagatcaggcacccgttgaatccccggagctcaag
cctctcgcggaggaattccccggagaagcctacgagaaaatctcggagctgaaggcgagc
gccaaggccaagttatccaaactgaaaatcccttctgagcccattgagcaaaccttcccc
ggcgatgtgcactgcgttgaagagatcctgaaggaaatgacccactcatggccacctcct
ttgactgcgattcatacaccgagcacagcagagccctgcaaattcccgtttccctcaaag
gattcccagcatgttggatctgtagcacagaatcagaaacagtatgatgcaccttcaaaa
acgttgcccaattctcaaccgagaacatcaatgctccaggatgaccttcagctcagtgat
agtgaagacagtggtgatgaccaagttgttgcaaagccgccagcttcatttgctcctcca
agggcgccgccgtcgcagccgcagagcgtcgcctcagcacattccagcagcgccgcgtcg
ggcagcaccagcgactcggacacctcgtcggactcggagacggagagcagctccagcgac
agcgaggccaacgacggcgcgaggccgccggcgcccgagcctgaccctccgacgtccaac
aagtggcagctcgacaactggctaacgaaggtgaacccgccggcagtgccaaccgagagc
cccggggaactcggccacacggacggacacgaggagaacaaggagcagggcaggagcatc
agcagcaacagctcccacgagcggcccggtccgaaggagcctcatcccaagagctccagc
cgagcgggccgggctcctcaggatgcccatctcgcgagcaagcggagcggccacaagtcg
cccgcgcgaagcgaggagccctcgcagagacacacggttgggatcaaaaggcccagcaag
gtccctgcccacgaggggcccaagggaggcctgaaggtggaaagcgagccggccccgtac
gaggcgcaagacccgtcttccagggacaagcccaaagtaaagacgaaagggaggcccagg
tccggggataaaaaagaatcgaaagcgacgtcgcaggagccctctgagaacagaaagcac
aagggctcgcaccaggccagctccaagggcttcctggaccccaagcccgtgagagacgct
ctggctggcagcacccaagagcatctccctgtcagccccctcgcccaaagccagggcacg
ccgcccaggactagcggcactaaggccgcggccgtgggcagggaggatttccacagggac
aagtttcccttgccggtcagggagaagacgttgttatcgcccgtgagggacttcccgctc
ccgcacgccctcgtggtgaaaattgagctcgctctcctgtccaggattcctcggcctccc
gggaaaggcagtcgccagaggaaagcagaggctaaagagctcctgggcgcgaggaggcag
gatttggagagaaaaagcacggaccctcctgacaagtccttcaaaaagcggaagagagaa
atggagaaggagagcgataggaagaagatgaaatcggacaaagaaaccaaatcgttgcag
tcttcaactcacaaagactccagcaaattgaaagtatccaaagcttcactggacatgcag
aggagagatgtcctgctgcccccgccgctgccgcccccggctcctgcacatcccgccccg
aaggcgcccaagggggcccagaagcgacccaggagcgagagcgacgagcagcctgccccg
gacagcactgccaagaacaagagcagccacaaggatcccttgtcctccaagcacagaaaa
gtggacaagtatccggaacagcctaagagcaacaaagaatctgcaggggatgtcacaaat
cctttcccagtgccttctttgccaaatggtacctcccagccaaggagacctcaagtcaag
ttcgagaaacagcattcgatagaacattacattgaagaagccaagaggctgaagcacaaa
gctgatgctatgaccgacaaggttggaaaggcctttcagtacctggatgctgcacttgcc
ttcattgaatacgggattgccatagaatcggacacagcagcccccaaatctgcttacagc
atctttgctgacaccatggatctcatcaaattcataatgacattgaaaccctttatggac
tcctcagcatcttcacaggaaaagatttttgccgtgttatgcatgcgctgccaggcggtt
ctgcacatggcaatgttccgatacaagaaagacacggcagtgaagtattccaggatcctc
aatgaccacttcaagagttcttccagagtatcacaagcaccttctccgtgtgttgcaagg
agctccggcacgccgtccccgctctctccgatgccctctcccgccagctccgggggctcg
cagccgggatcgaacgccagcggcggcagcctgggcgctgccgtcagcgtcccctctaac
atcccagtcatcacttcctcctatgtcaacatcacttcctacgtcctctacgcgtatgat
atttgggaacacgctgatgccctggccaggaggaataaagatttttttgatgagctcagc
acagcggggtgtgctctggccctgaacagcagcctggccgaactggtacactacactaga
cagggtttacagtggctgagactggaaacaaacacgccttaa
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