Novosphingobium pentaromativorans: JI59_10400
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Entry
JI59_10400 CDS
T03399
Symbol
prfC
Name
(GenBank) peptide chain release factor 3
KO
K02837
peptide chain release factor 3
Organism
npn
Novosphingobium pentaromativorans
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
npn03012
]
JI59_10400 (prfC)
Translation factors [BR:
npn03012
]
Prokaryotic type
Release factors
JI59_10400 (prfC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
RF3_C
GTP_EFTU_D2
MMR_HSR1
EFG_III
Roc
Ras
Arf
Ribosomal_L18A
Motif
Other DBs
NCBI-ProteinID:
AIT80155
UniProt:
G6EC60
LinkDB
All DBs
Position
complement(2168721..2170259)
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AA seq
512 aa
AA seq
DB search
MTASRRTFAIISHPDAGKTTLTEKLLLQGGAIHLAGQVKARGQARRARSDWMKIEQQRGI
SVTSSVMTFERTDADGNTITFNLLDTPGHEDFSEDTYRTLTAVDSAIMVIDAAKGIEPQT
RKLFEVCRLRSVPIITFVNKVDREGRACFDLLDEVADMLALDVCPMSWPVGMGGLFQGIL
DLKSGKVSRPEGGSKEFLGKVDENVELPEEVAEEIELAQAGYPEFDIEAYRGGDLTPVFF
GSALKNFGVVELIEAIANFAPPPRPQPTEAGPVDPEHKEVTGFIFKVQANMDPMHRDRIA
FMRLVSGTFKRGMKLTPSGLGKPIAVHSPILFFAQDREIADSAEPGDIIGIPNHGTLRVG
DTLSEKNQIRFTGLPNFAPEILRRVALRDPTKTKQLRKALDDLSEEGVIQVFYPEIGSQW
IVGVVGQLQLDVLISRLEAEYKVEAVLEASPFDTARWIKGDDKALRDFADFNKMNLAKDR
DGDPVFMAKSAWDVSYQQERNPDLTFSATKER
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatcgcgccgcaccttcgccattatctcgcatcctgacgcgggcaagacgacc
ctgaccgagaagctcctgcttcagggcggggcgattcaccttgccggacaggtcaaggcg
cgcggccaggcgcgccgcgcgcgctcggactggatgaagatcgaacagcagcgcggcatc
tcggtgaccagctcggtcatgactttcgagcgtaccgatgccgatggcaacacgatcaca
ttcaacctgctcgacacgccgggccacgaagacttctccgaggacacctaccgcacgcta
accgcggtcgattcggcgatcatggtcatcgacgcggccaagggcatcgagccgcagacc
cgcaagctgttcgaggtctgtcgtctgcggtcggtgccgatcatcactttcgtcaacaag
gtcgaccgcgaaggccgggcctgtttcgacctgctcgacgaagtggccgacatgcttgcg
ctcgatgtctgcccgatgtcgtggccggtcggcatgggtggcctcttccagggcattctc
gatctcaagagcggcaaggtcagccgtccggaaggcggcagcaaggaattcctcggcaag
gtcgacgaaaacgtcgaactgcccgaggaagtcgcggaggaaatcgagctggcccaggcc
ggctatcccgaattcgacatcgaggcctatcgcgggggcgacctgactccggtgttcttc
ggttccgcgctcaagaacttcggcgtggtcgaactgatcgaggcgatcgccaacttcgcg
ccgccgccgcgcccgcagccgaccgaggcagggccggtcgatcccgagcacaaggaagtc
actggcttcatcttcaaggtccaggccaacatggacccgatgcaccgcgaccgcatcgcc
ttcatgcggctggtctcgggcaccttcaagcgcgggatgaagctgacgccgtcggggctg
ggcaagccgatcgcggtgcactcgccgatcctcttcttcgcgcaggaccgtgagatcgcg
gacagcgccgagcctggcgatatcatcggaatccccaaccacggcaccttgcgcgtcggc
gataccctgtccgagaagaaccagatccgcttcaccggcctgcccaacttcgcgccggaa
atcctgcggcgcgtcgcgctcagggatccgaccaagaccaagcagctgcgcaaggcgctc
gacgacctgtccgaagagggcgtgatccaggtcttctatccggagatcggctcgcagtgg
atcgtcggcgtcgtcggccagctccagctcgacgtgctgatctcgcggctggaggccgag
tacaaggtcgaggcggtgctcgaggcatcgcccttcgacacggcgcgctggatcaagggc
gacgacaaggcgctccgggactttgcggatttcaacaagatgaacctcgccaaggaccgc
gacggcgatccggtgttcatggccaagtccgcctgggacgtcagctaccagcaggaacgc
aatcccgatctgaccttcagcgccaccaaggagcgttga
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