Nyctereutes procyonoides (raccoon dog): 129516380 Help Entry 129516380         CDS       T09008                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism npo  Nyctereutes procyonoides (raccoon dog) Pathway npo04151   PI3K-Akt signaling pathway npo04510   Focal adhesion npo04512   ECM-receptor interaction npo04820   Cytoskeleton in muscle cells npo04926   Relaxin signaling pathway npo04933   AGE-RAGE signaling pathway in diabetic complications npo04974   Protein digestion and absorption npo05146   Amoebiasis npo05165   Human papillomavirus infection npo05200   Pathways in cancer npo05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:npo00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     129516380 (COL4A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     129516380 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     129516380 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     129516380 (COL4A1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     129516380 (COL4A1)   09154 Digestive system    04974 Protein digestion and absorption     129516380 (COL4A1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     129516380 (COL4A1)   09162 Cancer: specific types    05222 Small cell lung cancer     129516380 (COL4A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     129516380 (COL4A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     129516380 (COL4A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     129516380 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:npo04147]     129516380 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:npo00536]     129516380 (COL4A1) Exosome [BR:npo04147]  Exosomal proteins   Exosomal proteins of other cancer cells    129516380 (COL4A1) Glycosaminoglycan binding proteins [BR:npo00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    129516380 (COL4A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  129516380 NCBI-ProteinID:  XP_055191715 LinkDB All DBs Position Unknown AA seq 1669 aa AA seqDB search MGPRLGVWLLLLPAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP GIPGCNGTKGEPGPLGPPGLPGFTGNPGPPGLPGMKGDPGEIIGHVPGTLLKGERGFPGP PGTPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP GVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGEKGEKGS PGFPGDSGYPGLPGREGFKGDKGEAGPPGPPGIAIGPGPLGEKGERGYPGAPGLRGEPGP KGFPGLQGQPGPPGFPVPGQAGAPGFPGERGEKGDQGFPGVSLPGPSGRDGLPGPPGPPG PPGQPGHTNGIVECQPGPPGDQGPPGNPGQPGLTGEVGEKGQKGDSCLICDMAGLRGPPG PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGVPGLMGQPGAKGEPGEIYFDARLK GDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDI GPPGPPGFGPIGPVGDKGQAGFPGIPGSPGQPGPKGEAGKVVPLPGPPGAQGLPGSPGFQ GPQGDRGFPGTPGRPGLPGEKGTIGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNG LPGNPGVPGQKGEPGIGLPGLKGLPGLPGIPGTPGEKGNIGGPGVPGEHGAIGPPGLQGI RGDPGPPGLQGPKGAPGVPGIGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPG PKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGPKGEMGVMGTPGQPGSPGPAGLPG LPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDIVDMGSMKGQKGDQGEKGQIG PTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPG TPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGEQGISGFPGSPGE KGEKGSAGVPGIPGSPGPKGLPGTVGYPGSPGLPGEKGDKGLPGSDGIPGIKGEAGLPGQ PGPTGPAGQKGEPGSDGIPGSVGEKGEPGLPGRGFPGFPGAKGEKGSKGDVGFPGQAGSP GIPGSKGEPGFLGPPGPQGQPGLPGAPGHAVEGPKGDRGPQGQPGLPGLPGPVGPPGLPG LDGLKGDKGNPGWPGAPGAPGPKGEPGFQGLPGIGGSPGITGSKGDMGPPGVPGFQGQKG LPGLQGAKGDQGDQGFPGSKGLPGPPGPPGPYDIVKGEPGLPGPEGPAGLKGLPGPPGPK GQQGVTGSVGLPGPPGIPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP SVDHGFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMAV HSQTIQIPQCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atggggccccggctcggcgtgtggctgctgctgctgcccgccgccctcctgctccacgag gagcgcagccgggccgccgccaagggtggttgtgctggctctggatgtgggaagtgtgac tgccacggagtgaaaggacagaagggtgaaagaggactcccagggctgcaaggtgtcatc ggatttcctgggatgcaaggacccgagggaccacaggggccaccaggacaaaagggtgat actggagaacccggactgcctggaacgaaagggacaaggggacccccaggagcatcgggt taccctggaaacccaggactgcctggcattcctggccaagacggcccccccggtcctcca ggtatccctggatgcaatggaacaaagggtgagccagggcctctggggcccccgggtttg cctggattcactggaaatcctggaccacccgggttaccaggaatgaagggagatccaggt gaaatcattggccatgtgcctgggaccctgctgaaaggcgaaagaggatttcctggaccc ccaggaacaccaggctcgccaggactgccggggttgcaaggtcctgttggccctccagga tttactggaccaccaggtcccccaggccctcctggccctccaggtgaaaaggggcaaatg ggtttaagttttcaagggccaaaaggtgacaagggtgaccaaggggtcagtgggccgcca ggagtgccaggacaagctcaagttcaagaaaaaggagactttgccactaaaggagagaag ggtcaaaaaggtgaacctggatttcaggggatgccaggggttggagagaaaggtgaacct ggcaaaccagggccccgaggaaaacctggaaaagatggtgaaaagggagaaaaagggagt ccaggctttccaggcgactcggggtatccgggactcccaggccgtgaaggtttcaaggga gacaaaggtgaagcaggtcctccaggcccacccggcattgccatcggccctggacccttg ggagagaaaggagagcgtgggtacccgggtgccccagggttgagaggagagccaggcccc aaaggtttcccaggattgcaaggccagccaggccctccaggcttcccagttccaggacag gctggtgctcctggcttccctggtgagagaggagagaaaggtgaccaggggtttccaggt gtatcattgccaggaccaagcggacgggatggactcccaggcccccctgggcctcccggg ccccctggacagccaggccacacgaacggcattgtggaatgccagcctggaccaccaggg gatcagggtccccccggaaatccagggcagccagggctgacgggcgaagtcggagaaaaa ggtcagaaaggagacagctgcctcatctgtgacatggcaggacttcgggggccccctggg ccacagggccccccgggagagataggtttcccggggcagccaggggccaagggtgacaga ggcttgcccggcagagatggtctggaaggattgcctggtccgcagggtgtaccggggctg atgggccagccaggagccaagggagagcctggcgagatttacttcgacgcccgactcaaa ggagacaagggagacccgggctttccaggacagcctgggatgccaggcagagcagggtct cctgggagagatggccatccggggctgccaggccccaaaggctccccgggttcagtagga ttgaaaggagagcgtggaccccctgggggagttggattccccggtagtcgcggtgacatc ggcccccctgggcctccagggtttggccccattggccccgttggtgacaaaggacaagca ggttttccggggatccctgggtccccaggccagccaggtcccaagggtgaagcaggaaaa gttgtgcccctacctggtccccctggagcacagggacttccaggatccccaggattccaa gggccgcaaggtgaccgaggttttcctggaaccccaggaaggccgggcctcccgggagag aagggaactatcggccagccgggaatcggatttccagggcctcccggccccaaaggtgtt gatggcttacctggagacgtggggcctcctgggagtccaggtcgcccaggatttaatggc ttacctggcaacccaggtgtgcctggccaaaagggagagccaggaattggtctgccagga ctcaaaggattacctggtcttcctggcattcctggcacacccggggaaaaggggaacatt ggaggaccaggcgttccaggagagcatggtgctattggccccccaggccttcagggaatc agaggtgacccaggaccacctggattacaaggtcccaaaggagctccgggagttcctgga atcggcccccctggagcaatgggcccccctggaggacagggaccaccagggtcctcaggc cctcctggagtgaaaggagagaagggcttccccggatttccaggcctggacatgccgggc cccaaaggagataaagggtcccaagggctgcctggcctgacaggacagtcggggctccct ggtcttcctggacagcagggcacaccgggagttccagggtttccaggtcccaagggagag atgggcgtcatggggaccccagggcagcctggctctccaggaccagcaggcctgccagga ttgccaggagaaaaaggagaccacggcttcccaggctcctcgggacccaggggagaccct ggcttcaagggggacaaaggtgacgtgggtctgcccggcaagcctggctccatggacata gtggacatgggcagcatgaagggtcagaagggagaccaaggagagaaaggacaaattgga ccaactggtgataaaggatcccggggagatcctggaaccccaggagtgcctggaaaggat ggccaggcagggcatcccgggcagccaggacctaaaggtgacccaggcattggcggaacc ccgggtgctcctggacttcctgggcccaaaggatcagttggtggaatgggcctacctgga acgcctggagaaaaaggtgtgcctggaatccctggcccacagggtgtccctggcttacct ggggagaaaggagcaaaaggagagaaggggcaggctggcctacctggcattggaatcccg ggccggcccggggacaagggagagcaagggatctcgggttttccgggaagtcctggagag aagggagagaaaggcagcgctggcgttccagggatacccggctctccaggccccaaagga ttgccagggactgtcggctatccaggaagccctggactgcccggagaaaaaggtgacaaa ggcctcccaggatcagatggaattcctggcatcaaaggagaagcaggtcttcctgggcag cctggccccacgggcccagccggccagaaaggggagcccggcagtgatggaatcccaggg tcagtgggagagaagggtgaaccagggctgcctggaagaggattcccagggtttccaggg gccaaaggagagaaaggctcaaagggtgatgtgggattcccgggacaagcggggagtcca ggcattcccggatccaaaggagagccaggattcctgggccccccggggccgcaaggacag ccaggcttgcctggagccccaggccacgctgtggagggacccaagggagaccgaggccca cagggtcaacccggcctgccagggcttccgggacctgtgggacctccagggctccctggg cttgatggactcaaaggtgacaaaggaaacccagggtggccgggggctcccggagctcca gggcccaagggagagccaggattccagggcctgcctgggattggaggctctccaggcatc actggctcgaagggggatatgggacctcctggagttccaggatttcaaggtcagaaaggt ctccctggcctgcagggagccaagggcgatcaaggtgaccagggcttccctggaagtaaa ggccttcctggtcccccgggccccccagggccctatgacatcgtcaaaggcgaaccaggg cttcctggtccggagggtcctgcaggtctgaaggggctcccgggacctccaggccccaaa ggacagcaaggtgtgacgggatccgtgggcttacctggaccaccaggtattcctggtttt gacggtgcacctggccagaaaggagagactggacccttcggcccccctggtccaagaggg tttccaggcccgccaggccctgatgggttgccaggatccatgggtcccccaggcacccca tctgtggaccatggcttcctcgtgactaggcacagtcaaacaacagacgacccacagtgt ccacctgggaccaaaattctttaccacgggtactccttgctctacgtgcaaggcaacgaa cgggcccatggccaggacttgggcacggcggggagctgtctgcgaaagttcagtacgatg cccttccttttctgcaacatcaacaacgtgtgtaacttcgcctcccgaaacgactactcc tactggctatccacgccagagcccatgcccatgtccatggcgcccatcgccggggacaac atcaggccatttattagcaggtgcgcggtgtgtgaggcgccagccatggtgatggctgtg cacagccagaccattcagatcccgcagtgccctagcggctggtcctccctctggatcggc tattccttcgtgatgcacaccagcgccggcgccgaaggttctggccaagcccttgcgtct cctgggtcttgcctggaagagtttcgaagtgcgccattcatcgagtgccacggccgtggg acctgcaactactacgccaatgcttacagcttctggctcgccactatcgagagaagcgag atgttcaagaagcccacgccatccaccttgaaggcaggagagctacgcacacacgtcagt cgctgccaagtctgtatgagaagaacgtaa

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