Nyctereutes procyonoides (raccoon dog): 129516864
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Entry
129516864 CDS
T09008
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03030
DNA replication
npo03420
Nucleotide excision repair
npo03430
Mismatch repair
npo03440
Homologous recombination
npo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129516864 (RPA1)
03420 Nucleotide excision repair
129516864 (RPA1)
03430 Mismatch repair
129516864 (RPA1)
03440 Homologous recombination
129516864 (RPA1)
03460 Fanconi anemia pathway
129516864 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npo03000
]
129516864 (RPA1)
03032 DNA replication proteins [BR:
npo03032
]
129516864 (RPA1)
03400 DNA repair and recombination proteins [BR:
npo03400
]
129516864 (RPA1)
Transcription factors [BR:
npo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129516864 (RPA1)
DNA replication proteins [BR:
npo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
129516864 (RPA1)
DNA repair and recombination proteins [BR:
npo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
129516864 (RPA1)
MMR (mismatch excision repair)
129516864 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
129516864 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
A_deaminase
Motif
Other DBs
NCBI-GeneID:
129516864
NCBI-ProteinID:
XP_055192352
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEEQLSSNCICQINRFIVNTLKDGRRVVILMELNILKSAEAVGIKIGNPVPYNE
GHGQQQAVPSPVSAANPPANKPQQQNGSSTMGFTASKTYGVSKTFGKPGGTSLASSSGGT
QVKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QVDKFFPLIDMNKVYYISKGILKIANKQFTAVKNDYEMTFNNETSVMPCEDGHHLPTVQF
DFTGIGDLESKTKDSLIDIIGICKSYEEATKITVKSNNREVSKRNIYLMDMSGKVVTATL
WGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLKSGGTGGGNTNWKTLYEVKSENLGHGDKADYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPSFKYRMILSVNIADFQENQWVTCFQESAEAII
GQSTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYR
EYGRRLIMNIRRNALM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggccataatgcaacagggagatacatcc
ataaaacccatcctccaagtcattaacatccgtcccattactacggggaatagtcctccc
cgttatcgactgcttatgagtgatggattgaacactctatcctctttcatgttggcaaca
cagttgaaccctctcgttgaggaagaacaattgtctagcaactgtatttgccagattaat
cgatttattgttaacactctgaaagatggaaggagagtagttattttgatggagttaaac
attttgaaatcagctgaagcagttggaataaagattggcaatcctgtgccctataatgaa
ggacatgggcagcagcaggcagttccttctccagtctcagcagccaatccaccagccaac
aagccccagcaacagaatgggagctcaacaatgggtttcactgcttctaagacttacggt
gtctcaaagacatttggaaaacctggaggtaccagcctagcgagtagttctggaggaaca
caggtcaaagtggtgcccattgccagccttactccttaccaatccaagtggactatctgt
gctcgagttaccaacaaaagtcagatccgtacctggagcaattcccgaggggaagggaag
cttttctccatagaactagttgatgaaagtggtgaaatcagagctactgctttcaatgag
caagtggacaagttctttcccctcattgacatgaacaaggtctattatatctctaaaggc
atcctgaagattgctaacaaacaattcacagctgttaaaaatgactatgagatgaccttc
aataatgagacttctgtcatgccctgtgaagatggtcatcatttacctacagttcagttt
gacttcacagggattggtgacctagaaagcaagactaaggactcacttatagacataatt
gggatctgcaagagctatgaagaagccaccaaaatcacagtgaagtctaacaacagagaa
gtttctaagagaaatatctatttgatggacatgtcagggaaagtagtgaccgctactctg
tggggggaagatgctgatagatttgatggttctagacaacccgtgatggctatcaaagga
gccagagtttctgattttggtggacggagcctctctgtactgtcttcaagcacgatcatt
gtgaatcctgacatcccggaggcctataaacttcgtggatggtttgactcggaaggacaa
gccttagatggtgtttccatctctgatctaaagagtggagggacaggaggaggcaacacc
aactggaaaactttgtatgaggttaaatcagagaatctaggccatggtgacaaggctgac
tattttagctccgtggcgacagtagtgtatcttcgcaaagagaactgtatgtatcaggcc
tgcccaactcaggactgcaataagaaagtgatcgatcaacagaatggattataccgctgt
gagaagtgtgacagtgaatttcctagcttcaagtaccgcatgatcctgtcagtaaatatt
gctgattttcaagagaatcagtgggtcacttgtttccaggagtctgcagaggccatcatt
ggacaaagtactgcttatcttggggaattaaaagagaagaacgagcaagcatttgaagaa
gttttccaaaatgccaacttccgatctttcacattcaggatcagggtgaaactagagacc
tacaacgatgagtctcgaattaaggccactgtgatggacgtgaagcctgtggactacaga
gaatatggtagaaggctgatcatgaacatcaggagaaacgcactaatgtga
DBGET
integrated database retrieval system
