Novosphingobium sp. PP1Y: PP1Y_AT17276
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Entry
PP1Y_AT17276 CDS
T01515
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp00020
Citrate cycle (TCA cycle)
npp00785
Lipoic acid metabolism
npp01100
Metabolic pathways
npp01110
Biosynthesis of secondary metabolites
npp01120
Microbial metabolism in diverse environments
npp01200
Carbon metabolism
npp01210
2-Oxocarboxylic acid metabolism
Module
npp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
npp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PP1Y_AT17276
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PP1Y_AT17276
Enzymes [BR:
npp01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
PP1Y_AT17276
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
Motif
Other DBs
NCBI-ProteinID:
CCA92612
UniProt:
F6IMG0
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All DBs
Position
complement(1822111..1824963)
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AA seq
950 aa
AA seq
DB search
MGNENLDFTPDLGMDEPQPGPSWQRSNWPRVGAEFEDDLTQGLDPTALKVQIEKAAAKGG
KKVDQASLDQAAADAIRAMMLIRTYRVRGHLAADLDPLGLNQRKLPQDLTPEYHGFTGDA
LDRPVFVGGNLGLEWTTVRELVQILRANYCGKVGLEYMHIADVEERRFLQERMEGADKEI
EFTPEGKKAILQAVVRGEQYEKFLGKKYVGTKRFGLDGGESMIPALESVIKYGGAQGVKE
IVYGMAHRGRLNVLANVMAKPYKVIFHEFSGGTANPEDVGGSGDVKYHLGTSTDREFDGI
KVHMSLMPNPSHLETVDPVVLGKVRAYQVFHDDIGDDVGPGAKHKQVLPVLIHGDAAFAG
QGVVWECFGLSGVAGYNTGGCIHFVINNQIGFTTTPNFARNSPYPTDVAKGVQAPILHVN
GDDPAAVTFACKLAIDYRQTFGRDIVIDMWCYRRFGHNEGDEPSFTQPLMYAQIKKHPSV
STIYAERLKAEGVIDDAFLAETVEGFNNHLEEEFEAAKTYKANHADWFGGRWSGFNKPVD
PETARRNVHTGIEGKLFDSLGRTLTTVPDDLTIHKTLARVIQAKDEMFKTGEGFDWATAE
ALAFGSLVSEGYGVRLSGQDCERGTFSQRHAVWVDQKTERKYTPLETLPHGTFEVLNSTL
SEYGVLGFEYGYASADPKTLVLWEAQFGDFANGAQIIIDQYIAASEAKWLRANGLVMLLP
HGYEGQGPEHSSARLERYLQLCASDNIQVCNITTPANYFHVLRRQMHRPFRKPLIIMTPK
SLLRHPMAKSPASEFVGEGHFFRILSDPKAPSDEKTKKVILCSGKVAYDLFEARDQNDID
DTQIIRIEQLYPFPGEPLALRLSRMKNLEEIVWCQEEPKNNGAWFFVESLIEESAKEAGV
SACRPRYAGRGASASPATGLAKRHAAEQAALVADALHLSVRDELRRKQKA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgaaaatctcgatttcactccggacctcggcatggacgagccccagcccgga
ccgagctggcagcgcagcaactggccgcgcgtaggggccgagttcgaggacgacctcacc
cagggtctcgatcccacggccctcaaggtccagatcgaaaaggccgctgccaagggcggc
aagaaggtcgatcaggccagcctcgaccaggctgccgccgacgcgatccgcgccatgatg
ctgatccgcacctatcgcgtgcgcggtcacctggcggcggacctcgacccgctcggcctc
aaccagcgcaagctgccgcaggacctcacccccgaataccatggcttcaccggcgacgcg
ctcgaccggccggtgttcgtcggcggcaacctcggcctcgagtggaccacggtgcgcgaa
ctggtgcagatcctgcgcgccaactactgcggcaaggtcggcctcgaatacatgcacatc
gccgatgtcgaggaacgccgtttcctccaggagcggatggaaggcgccgacaaggaaatc
gagttcacccccgagggcaagaaggcgatccttcaggccgtcgtgcgcggcgagcagtac
gagaagtttctcggcaagaagtacgtcggcaccaagcgcttcggcctcgacggcggtgaa
tcgatgatcccggcgctggagtcggtgatcaagtacggcggcgcccagggcgtcaaggag
atcgtctacggcatggcccaccgcggccgcctcaacgttctcgccaacgtgatggccaag
ccctacaaggtcatcttccacgaattctccggcggcaccgccaaccccgaggacgtcggc
ggttcgggcgacgtgaagtaccacctgggcacttccaccgaccgcgagttcgacggcatc
aaggtccacatgagcctgatgcccaacccctcgcacctcgaaacggtcgatccggtcgtg
ctcggcaaggtccgcgcctaccaggttttccatgacgacatcggcgacgacgtgggtccc
ggcgccaagcacaagcaggtcctgccggtgctgatccacggcgacgcagccttcgccggc
cagggcgtggtgtgggaatgcttcggcctttcgggcgttgccggctacaacaccggcggc
tgcatccacttcgtcatcaacaaccagatcggcttcaccacgacgccgaacttcgcgcgc
aactcgccctacccgaccgacgtcgccaagggtgtccaggcgccgatcctgcacgtcaac
ggcgacgatccggccgcggttaccttcgcctgcaagctggcgatcgactatcgccagacc
ttcggccgcgacatcgtgatcgacatgtggtgctaccgccgcttcggccataacgaaggc
gacgagcccagcttcacgcagccgctgatgtatgcgcagatcaagaagcacccctcggtc
agcacgatctacgccgagcgcctgaaggccgaaggcgtgatcgacgacgccttccttgcc
gagacggtggaaggcttcaacaaccacctcgaagaggaattcgaggcggccaagacctac
aaggccaaccatgccgactggttcggcgggcgctggagcggcttcaacaagccggtcgat
ccggaaaccgcgcgccgcaacgtgcataccggcatcgagggcaagctgttcgacagcctc
ggccgtaccctcaccacggtccccgacgacctgaccatccacaagaccctcgcccgcgtc
atccaggcgaaggacgagatgttcaagaccggcgagggcttcgactgggccaccgccgaa
gcgctcgctttcggcagcctcgtctccgaaggctacggcgtgcgcctgtccggccaggac
tgcgaacgcgggacgttctcgcagcgccacgccgtctgggtcgaccagaagaccgagcgc
aagtacacgccgctcgaaaccctgccccacggcaccttcgaggttctgaactcgacgctt
tcggaatacggcgtgctcggcttcgagtacggctatgccagcgccgatccgaagacactg
gtcctgtgggaagcgcagttcggcgacttcgccaacggcgcgcagatcatcatcgaccag
tacatcgccgcatcggaagccaagtggctgcgcgccaacggcctcgtgatgctgctgccg
cacggctacgaaggccagggtccggagcactcctccgcccgcctcgaacgctacctgcag
ctctgcgcctcggacaacatccaggtgtgcaacatcactaccccggccaactacttccac
gtgctgcgccggcagatgcaccgtccgttccgcaagccgctgatcatcatgacgcccaag
tcgctgctgcgccatccgatggcgaagtcgccggcttcggagttcgtgggcgaaggccac
ttcttccgcatcctgtcggacccgaaggcgccgagcgacgagaagaccaagaaggtcatc
ctgtgttcgggcaaggtcgcctacgacctgttcgaggcgcgcgaccagaacgacatcgac
gacacccagatcatccgcatcgagcagctctaccccttcccgggcgaaccgctggccctg
cgcctctcgcgcatgaagaacctcgaggagatcgtctggtgccaggaagagcctaagaac
aacggcgcctggttcttcgtcgaatcgctgatcgaggaatccgccaaggaagccggcgtc
tctgcgtgccgtccgcgctatgccggccgcggcgcctcggcctcgcccgcaaccggcctt
gccaagcgccatgccgccgaacaggccgcgctggtggccgatgcactccacctttccgtc
cgtgacgaactccgacgcaagcagaaggcttga
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