Novosphingobium sp. PP1Y: PP1Y_AT7490
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Entry
PP1Y_AT7490 CDS
T01515
Name
(GenBank) D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp00470
D-Amino acid metabolism
npp00550
Peptidoglycan biosynthesis
npp01100
Metabolic pathways
npp01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PP1Y_AT7490
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PP1Y_AT7490
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PP1Y_AT7490
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
npp01011
]
PP1Y_AT7490
Enzymes [BR:
npp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PP1Y_AT7490
Peptidoglycan biosynthesis and degradation proteins [BR:
npp01011
]
Precursor biosynthesis
Amino acid ligase
PP1Y_AT7490
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
CCA91687
UniProt:
F6IJ61
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All DBs
Position
802891..803925
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AA seq
344 aa
AA seq
DB search
MGNPARRHACRRAQHTASRYTVSLPKLHVAVLMGGWSHERSVSLMSGEGVAKALESKGHK
VTRIDMDRNVALRLSEAAPDVVFNALHGAPGEDGTVQGMMDLMGLTYTHSGLATSVIAID
KELTKQALVPHGIPMPGGRIVASEDLYAGDPLPRPYVLKPVNEGSSVGVAIVMDASNYGN
PIRRDAAGPWQEFDHLLAEPYIRGRELTTAVIGDRALLVTELKPKSGFYDFDSKYTDGLT
EHVCPAEIPDEIAQACKDLALRAHRLLGCKGTSRSDFRWDDTQGVEGLFLLETNTQPGMT
PLSLVPEQARACGMEYADLVEAIIAEALEDARSKQAAGAVKGAE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatccagcgcgtcggcacgcctgccgacgggcccaacacacagcaagcaggtac
acagtgagccttcccaaacttcatgtcgcggtcctgatgggcggttggtcgcatgagcgg
tcggtttcgctgatgagcggggaaggcgtggccaaggcgctggagtccaagggccacaag
gtcacccgaatcgacatggaccgtaatgtcgcgctgcgcctgtcggaagccgcgcccgac
gtcgtgttcaatgcgctgcacggtgctccgggcgaagatggcacggttcagggcatgatg
gacctgatgggccttacctatacccattccggcctcgcaacgtcggtcatcgccatcgac
aaggaactgaccaagcaggcgctcgtcccccatggcattccgatgccgggcgggcgcatc
gtggcctccgaagatctctacgccggcgatccgctgccgcgcccttatgtcctcaagccg
gttaacgaaggctcgtccgtcggcgttgcgatcgtcatggacgcgagcaactacggcaat
ccgatccgccgcgatgcagccgggccgtggcaggaattcgatcacctgctggccgagccc
tacatccgcggccgcgaactgacgacggcagtgatcggcgaccgtgcgctgctggtgacg
gaactgaagccgaagtccggtttttacgacttcgattccaagtacaccgacggcttgacc
gagcatgtctgcccggctgaaatcccggacgagattgcccaggcctgcaaggacctagcc
ctgcgcgcgcaccgcctgctcggctgcaagggcaccagccgctcggatttccgctgggac
gatacgcagggcgtggaagggctgttcctgctggaaaccaacacccaacccggcatgacg
ccgctcagcctcgtgcccgagcaggcccgggcctgcggcatggaatatgccgacctcgtc
gaggcgatcatcgccgaggcgctggaggacgcgcggtcgaaacaagctgcgggggcagtg
aagggggctgaatga
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