Novosphingobium sp. PP1Y: PP1Y_Mpl1086
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Entry
PP1Y_Mpl1086 CDS
T01515
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npp03000
]
PP1Y_Mpl1086
Transcription factors [BR:
npp03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PP1Y_Mpl1086
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_31
HTH_23
HTH_38
Motif
Other DBs
NCBI-ProteinID:
CCA90091
UniProt:
F6ICR6
LinkDB
All DBs
Position
Mpl:105381..106490
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AA seq
369 aa
AA seq
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MAKDDATSRKKRGNRKQLGRPTIADVARLAGCSPMTVSRVINHEASVREDTRKVVQAAIE
QLNYSPNRAARSLAGASQLRIALLYTNPSASYLSEFLMGCLEEASHSDVHLVVERCAFGE
DEDEVIRRLTKSGIDGFLLPPPLSDEKPLLELLRQLDSRAVLVGPGTAEADDWAVMIDEY
QAAYDMTNHIIGLGHKRIGFVIGNPHQTASGQRLSGYLDAMAAAGLDVPESLVRQGLFTY
RSGIDAAMYLLDQPDPPTAIFASNDDMAAAAVAVAQRRHLDVPLDLTVCGFDDTPIASTI
WPELTTIRQPIHEMASTALEMLATELRAERSGKAGVPVHLKLDYSIVRRQSDNAPGLARR
AMRGSRQEE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggatgacgcaacaagccggaaaaagaggggcaaccgcaagcaattaggtcgg
ccgacgattgccgacgtggcgcgcttggcaggttgctcgccgatgacggtcagccgcgtg
atcaaccacgaagcaagcgtacgcgaagacacccgcaaggtcgtgcaggcggcgatagaa
cagctcaactattcgcccaaccgcgccgcccgaagcctggccggcgcgtcgcaattacgc
attgcgctgctctacaccaacccgtcagcgtcctatctcagcgaattcctgatgggctgt
ctggaagaagcgagccacagtgacgttcacctcgtagtcgaacgctgcgcgttcggcgaa
gacgaagacgaagtcatccgacgtctcacgaaaagcggcatcgacggtttccttctgccc
ccacctctgagcgacgaaaagccgcttctggaactgcttcgccagttggacagtcgtgcc
gttctggtcggcccgggcacggcggaagcggacgactgggcggtgatgatcgatgagtat
caagccgcctatgacatgacgaaccacattatcgggcttggccacaagcgcatcggtttc
gtcatcggcaacccccaccagacggcaagcggacaacgcctgtccggctatcttgacgcg
atggcggcggccgggctcgatgtgcctgaaagtctcgtgcggcagggtctcttcacatat
cgctcgggcatcgatgcagccatgtacctgctcgaccagccagatccccctaccgcgatt
ttcgcctccaacgacgacatggcggcagccgcagtggcggtggcgcagcgccgtcacctc
gacgtgccgctggaccttacggtttgcggctttgacgatacgccgattgccagcacgatc
tggcctgagctgacgaccatccgccagcccatccatgagatggcaagcacggcgctcgaa
atgctggccactgaactgcgggcagaacgtagcggcaaagccggcgttcccgtgcatctc
aagctcgattactcgatcgtgcggcgccagtccgacaacgcgccgggccttgcccgcagg
gccatgaggggcagcaggcaggaggaatga
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