Nanorana parkeri (Xizang Plateau frog): 108784407
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Entry
108784407 CDS
T04897
Symbol
CHD4
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4 isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108784407 (CHD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npr03036
]
108784407 (CHD4)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108784407 (CHD4)
Chromatin remodeling factors
NuRD complex
108784407 (CHD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
ResIII
HDA2-3
DEAD
PHD_2
HMG_box
Motif
Other DBs
NCBI-GeneID:
108784407
NCBI-ProteinID:
XP_018408706
LinkDB
All DBs
Position
Unknown
AA seq
1895 aa
AA seq
DB search
MASGHGPSSPGSDNEIEVMLNSGLHQDDDDLDDDLSEVETPKVKKKKKPKKARESKTPKG
KRQKKEDLEDSSGEGNDFGDDDLGTLRSDSEGSDYTPGKKKKKKLSQKKEKKQKVKPREE
DEDDDDDDSKEPKTSSQLLEDWGMEDIDHMFTEDDYRTLTNYKAFSQFVRPLIAAKNPKI
AVSKMMMVLGAKWREFSTNNPLKGSSGASVAAAAAAAEAVVASMVASTEVVAPPPPPPPP
PPPPAEVPLRKAKTKEGKGPNARKKPKVMRPPENKKTKAKKVAPLKIKLGGFGTKRKRSS
SEEEDLDVDSDYDEGSMNSMSVSDGSTSKSSRSRKKLRASKKKKKGEEEVTAGVVDGYET
DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMDKAPEGKWSCPHCEKEGVQWEAKEDN
SEEDDLDETVGDPEEEDHHMEFCRVCKDGGELLCCDVCPSSYHIHCLNPPLPEIPNGEWL
CPRCTCPSLKGKIQKILIWKWGQPPSATPAPKPAGAGLDAPPLKPLEGRAEREFFVKWQG
MSYLHCSWVTELQLELHCQVMFRNYQRKNDMDEPPAGDYGVDEEEKSRKRKNKDPKYLEL
EEKFFRYGIKPEWLMIHRVLNHSVDKKNNVHYLIKWRDLAYDQASWELEDADIQDYDIYK
QGYWNHRDLMCGEEGRPGKKIRKVKVRKMERPPDTPIVDPTVKYDRQPEFLDCTGGTLHP
YQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTII
NWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFEDNAIRGGKKASRMKKEASVKFHVL
LTSYELITIDMAVLGSIDWACLVVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNN
LEELFHLLNFLTPERFNNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPS
KTELIVRVELSPMQKKYYKFILTRNFEALNTRGGGNQVSLLNVVMDLKKCCNHPYLFPVA
AMEAPKMPNGMYDGSALIKGAGKLLLLQKMLRNLKDNGHRVLIFSQMTKMLDLLEDFMEH
EGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVVIYDSDW
NPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGSKTG
SMSKQELDDILKFGTEELFKDEATEGKSCGENKEGEDISVIHYDDRAIDKLLDRNQDHQI
EDTEIQGMNEYLSSFKVAQYVVREEEMEEEEVVREIIKQEESVDPDYWEKLLRHHYEQQQ
EDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSAASEEGDEDFDERSEAARR
PNRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRYGMPPQDAFTTQWLVR
DLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIRKKV
QEFEHVNGRWSMPELAEAEENKKNSPADSPSPKTPTPSTPGDTQPNTPAPTPAIAEPPKT
EESAPKEEAPEAETKPPEENTESTQPAVAAAVAAAPTPTTESKSPAAPAEVKPEEAEKEE
KPPAAEPMETDLKAEADKSDDVIAVDDKKEEVPPVPLQNGETPKDAVEEKKKVVATKQRF
MFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLSGIITHGYARWQDIQNDV
RYAILNEPFKGEVNRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMSEDPSHPSM
ALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTRLPTTIA
RIPPVAVRLQMSERNILSRLASRTGEPQPQQMAQQ
NT seq
5688 nt
NT seq
+upstream
nt +downstream
nt
atggcttccggacatggaccttcctcccccggcagtgataatgaaattgaagtcatgttg
aacagtggccttcaccaagatgacgatgatttggatgatgacctctcggaagttgaaacg
cctaaagtaaagaaaaagaagaaacccaaaaaggcacgggaatccaaaacccctaaagga
aagcgtcagaaaaaggaggatctggaggacagctcaggggaaggaaatgattttggggat
gatgatctgggaacccttcgctcagacagcgagggcagtgattatacccctggaaagaag
aagaaaaagaagctgtcgcagaagaaagaaaagaaacagaaggtgaaaccacgtgaggag
gatgaagatgatgatgacgacgattccaaggaaccaaagacttcatcacaacttttggaa
gactggggaatggaggacattgatcatatgttcacggaggatgattacaggacattgact
aactacaaggctttcagtcagtttgtcaggcctctgattgctgcaaagaaccctaaaatt
gcagtttctaagatgatgatggttcttggagccaagtggagggaattcagcaccaacaat
ccattaaagggcagctctggggcatcagtggctgctgcagctgccgccgccgaggctgtg
gtcgccagcatggtagcctctacagaggtggttgctcctccaccgccgccaccaccgccg
ccaccacctccagctgaagttccattgcgcaaagccaagactaaggaaggaaaaggaccc
aacgccaggaagaaaccaaaggttatgcgtcccccagaaaataaaaagaccaaagccaag
aaggttgcccctctgaagatcaagcttgggggctttggtacgaaacgcaaacgctcctct
agcgaagaggaggaccttgatgtggactcggactatgatgagggcagcatgaacagcatg
tctgtatctgacggatccactagcaagagcagccgaagccgcaagaaacttagagccagc
aagaagaagaagaagggtgaggaggaagtaacagcaggtgttgttgatggctatgaaacg
gaccaccaggactactgtgaggtttgccagcaaggaggggagatcatcctctgcgatact
tgtcctcgagcataccacatggtttgcctggacccagacatggacaaggcacccgagggc
aaatggagctgcccgcattgtgaaaaggagggcgtacaatgggaagcgaaggaagataac
tctgaggaagatgacttggacgagaccgtaggtgaccctgaggaggaggatcaccacatg
gagttctgtcgagtgtgtaaggatggaggtgaactactgtgctgcgacgtctgtccttcc
tcctatcacattcactgtctgaacccaccactgccagagatacccaatggagaatggttg
tgcccaagatgcacatgtccatcattgaaaggaaaaattcagaaaatcctgatatggaag
tgggggcagccaccttctgccactcctgcgcccaaaccagcaggtgccggtcttgatgct
ccccctctgaaacctttggagggcagagcagagcgcgagttctttgtcaagtggcagggc
atgtcctatctgcattgctcttgggtgacagaactgcagctggagctgcactgtcaggtt
atgttcagaaactaccaacgaaagaacgacatggatgagcctcctgctggagattatgga
gtagatgaagaagagaagagccgcaagaggaaaaacaaagatccaaagtatctggaactg
gaagagaaattctttcgctatggtatcaagcctgagtggctaatgattcacagagtactg
aaccacagtgtggacaagaagaacaatgtacattacctgattaagtggagagaccttgca
tatgatcaggcatcttgggagttagaagatgcagatattcaggactatgacatatacaag
cagggttactggaatcacagggatctaatgtgtggtgaggaaggacgacctggcaaaaaa
attaggaaagttaaagtccgaaagatggagcgacctccagacaccccaattgtggatccc
acagtgaaatatgaccgccagccagagttcttggattgtactggaggaaccctgcacccc
taccagctagaaggattaaactggctgcgcttctcctgggcacagggcactgatactatt
cttgcagatgaaatgggtttgggcaagactgtgcagactgcagtattcttgtactctctt
tataaagagggtcactctaaaggtcctttcctggtcagtgcacccctttctaccatcatc
aactgggagcgtgaatttgagatgtgggctcctgacatgtacgttgtcacttatgttgga
gacaaggacagccgagccgtcattcgagagaacgagttttcgtttgaagacaatgcgatc
cgaggtggcaagaaagcttcacgcatgaagaaagaggcttcagtaaaattccatgtactg
ttgacatcatatgagctgattaccatagacatggctgtactgggctccattgattgggcc
tgtcttgtggtggatgaagctcatcgtctgaaaaacaaccagtccaagtttttcagagtt
ctgaatggctacagtcttcagcacaagttgcttctcacaggaacccccctgcagaacaat
ttggaggaattgttccatctgcttaatttcttgacgccagagcgcttcaacaacttggag
ggctttttggaggaatttgcagatattgccaaagaagatcagattaagaagctgcacgac
atgctgggtcctcacatgttgagaagattgaaggctgacgtgttcaagaatatgccctct
aagactgagctcattgtgcgtgtggagcttagccccatgcagaagaaatactacaagttc
atccttactagaaactttgaggctctgaatactcggggaggtggtaaccaagtatctctg
ctcaatgtggtgatggatctgaagaagtgctgcaaccatccatacctcttccctgtggct
gctatggaagcacccaagatgcccaatgggatgtatgatggcagcgccctcatcaaagga
gctgggaagctgctgctgctgcaaaagatgttgcggaacctgaaggataatggacacaga
gtgctcatcttttcccagatgaccaagatgttagacctgctggaagacttcatggagcac
gagggatataaatacgagaggatagacggtggaattaccggaaacatgcgtcaggaggcc
attgatcgctttaacgctcctggcgctcagcagttttgtttcctactgtccactcgtgct
ggaggtttgggaatcaatctcgccacagctgatactgtagtaatttatgactcggattgg
aaccctcacaatgatattcaggcgttcagcagagctcaccgtataggacaaaacaaaaag
gtcatgatctatcgattcgttactcgtgcctctgtagaagagaggattactcaggtagca
aagaaaaagatgatgctgacccacttggtggtaaggccgggtctcggttccaaaactggg
tcaatgtccaagcaggaactggacgatatcttgaagtttggtactgaggagctctttaaa
gatgaagcgacagaaggaaagtcatgtggtgaaaataaagagggtgaagacatcagtgtt
attcactacgatgacagagcaatcgataagctactggacaggaaccaagatcatcaaata
gaagacactgagattcaaggaatgaacgaatatctgagctcctttaaggtggctcagtac
gtcgtccgagaagaggagatggaggaagaggaggttgtccgtgagatcatcaagcaggag
gagagcgtggatccagactactgggagaagcttctccgccatcattatgagcagcagcag
gaggacctggcgcgaaatctgggcaaaggaaagagaatacgcaagcaagtcaattataat
gacggcagccaagaggacagagattggcaggatgatcagtccgataaccagtctgattat
tctgcggcatcagaagaaggcgatgaagactttgatgagcgatcagaagcagctcgtcga
cccaacaggaaaggcctgagaaatgacaaggacaaacctctccctccactactggctcgt
gtgggaggcaatatcgaggtattaggattcaatgccagacagagaaaggccttcttgaat
gccattatgcgctatggaatgccgcctcaggatgcctttaccactcagtggcttgtgaga
gatctgcgtggaaaatcagagaaggagtttaaggcatatgtgtcattgttcatgcgtcat
ctctgtgaacccggggcagatggggcggagacatttgcagatggagtcccaagagaaggt
ctatcccgccaacatgtgttaaccaggattggcgttatgtccctcatccgtaaaaaggtt
caagagtttgagcatgtgaatgggcgctggagtatgccggaactggcagaagcagaggag
aacaagaagaattctcctgctgactctccatcacccaaaactccaaccccgtctacacca
ggggatacacagcccaatacaccagctccaacccctgcaattgctgagcctccaaaaact
gaagagagtgctccaaaggaggaggccccagaagcggaaaccaaacccccagaggaaaat
acagagagcacacaacctgcagtggcagcggcagtggcagctgcaccaacacccacaaca
gagagcaaatctcctgctgccccggcagaggtaaaaccagaggaggcagagaaggaagag
aagcctccagcagcagagcccatggagacagacctgaaagcagaggcagataaatcagat
gacgtgatcgcggtggatgataagaaagaagaggtcccaccagtcccattacaaaacgga
gagacgcctaaagatgctgtggaggagaagaagaaggttgttgccaccaaacaaagattc
atgttcaacattgcggatggtggtttcacagagctgcactcattatggcagaatgaagaa
agagcagcaactgtaaccaagaagacgtatgagatctggcacagacgacacgattactgg
ctgctttctggcattataactcatggctatgcacgctggcaagacatccagaatgatgta
cgatatgccattctcaacgaacccttcaagggggaggtgaacagaggaaacttcctggag
atcaagaacaagttcctggcacggcgattcaagctcttagaacaagcgcttgtcatagaa
gagcagctaagaagagccgcctacctgaacatgtcagaagacccttcccacccttccatg
gctctgaacacaagattcgcagaggtggagtgtttggcagaaagtcaccagcacttatct
aaagagtccatggcaggaaacaagccagcaaatgccgttctacataaagtacttaagcag
ctggaggaactattgagcgacatgaaggccgatgtcaccagacttcccaccaccatcgcc
cgaattccacctgtggctgttcgactgcagatgtcagagaggaacattttgagccgactg
gcgagcaggaccggagaacctcaaccccaacagatggctcagcaataa
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integrated database retrieval system