Nanorana parkeri (Xizang Plateau frog): 108784496
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Entry
108784496 CDS
T04897
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
npr00535
]
108784496 (COL14A1)
Proteoglycans [BR:
npr00535
]
Extracellular matrix (ECM) proteoglycans
Others
108784496 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Copine
Motif
Other DBs
NCBI-GeneID:
108784496
NCBI-ProteinID:
XP_018408838
LinkDB
All DBs
Position
Unknown
AA seq
1847 aa
AA seq
DB search
MKGQPNLHTMIVLSLLAVTVFFSSLGQSQVTPPTKLRFHVVSQDSVQISWKASKDRIRGY
KLLVTPKSGGKTNQLNLKNNATRAIIQRLDPDRSYNVQIIAFNEDDESKPVRGEFRIRDL
EKKRKTAKNPKSESENQILEEDSKFACKSPANADIIILVDGSWSIGRVNFRLVRSFIENL
VGAFNVAEDKTRIGLAQYSGDPRIEWNLNTYDTKDAVLDAVRNLPYKGGNTLTGLALTYI
LENSFKTEAGARPDLPKIGILITDGKSQDDVIPPAKSLKDAGIELFAIGVKNADLNELKE
IASEPHNDHVYNVADFNIMDSIVGSLTKTVCERVEDIDINIKGEVTEVVGSPSDLVTSEV
TARSFRVSWSHGQGNVEKYRVVYYPTKGGQPEEVIVDGSVSTTVLKNLMSLTEYQIAIFA
VYARSTTDGLRGSETTLALPMATDLELYDVTHRSMRAKWRGVAGASGYMILYAPLTEGLA
ADEKEMKVPGSVTDVELDGLTPSTEYTVTVYAMFGEEASDPLTGQETTLPLSPPRDLRFS
NIEHSSATVSWDHSNRNVNGYRIMYVKTGESDINDVEVGRISNYNLKKLTSLTEYTVAIF
SVFDEGQSEPLTGTFTTKPVPSPRDLKVRDISARSFVAYWTHFAPDITMYRLQWTPRRGG
ATQEDEIKGDISSYLIDGLTHSTEYEVSLTAMFADESESDALSALATTLTRTTQAPTTAR
PTTAAIRFGIRNLLIDDETTSSLHVSWLMTDANIRQYIVSYITTYGDREEKVVSGRENDV
VLQPLLSDTEYKVTVTPVYFSGEGNPVSSSGRTLPLSAPRNLRVSDEWYNKLRITWDPPP
SPTMGYRIVYKPTSGSGPALETFVGDDVNTILILNLLSGTEYNLKVLASYSTGSSDALTG
VGKTLYLGVTNLSAYQVRMNSICSQWQLQRHATSYRIIIESLQDGSKQEANLAGGTSRHC
FYELLPNSRYRITVYAQMGEAEGPGVSIVETTLPAATAAPTKPPTPPPTIPVAREVCKSA
RADLVFLVDGSWSIGDDNFHKVINFLYSTAGAMDEIGPEATQVGVAQYSDDARTEFKLSS
HKSKASLLAAINAISYKGGNTKTGRAIKHVREDLFTVESGMRKGVPRVLVVITDGRSQDE
TVKFASEMHLEGFSIFAIGVADADYNELVNIASKPSERHVFFVDDFDGFKKIEDELVTFI
CETASATCPWAYIQGNSVSGFKMMDMFGLVQKEYSSLDGVSMEPGTFNNFPCYRIHKDAL
VSQPTKHIHPEGLPSDYTISFLFRLLPDTPKEPFALWEILNKGYEPLVGVILDNNGKTLT
FFNYDNKGQFQTITFEGPEVRRIFHGSFHKVHIIVTKTNSKLIIDCKQVGEKPLNVAGNI
TTDGLEVLGRMVRSRGARDNSAPFQLQMFDIVCTSTWANRDKCCELPAMRDEATCPPLPN
SCSCAEENKGLPGPPGPPGGAGMRGPKGAQGDQGSSGPDGLQGPIGPAGAQGPPGPQGPS
GHSIQGPSGPPGVKGDKGEAGNQGNQGLPGQPGSPGIEGPTGQRGFPGKDGTSGPPGPPG
SMGTPGNPGSPGSPGGPGRQGENGPPGPPGIKGERGERGDTQSQNMVRSIARQVCEQIIQ
SHMARFNSLLNQVPSQSVSVRSIAGPPGQPGTQGPQGPPGEQGSPGRPGFDGTPGSPGTP
GERGLSGEKGERGNSGVGTQGPRGPPGAPGSPGEGRTGSQGPVGAPGQRGLPGPSGNTGP
MGPPGPQGYCDAASCAGYGGYGGQPDQGSPESYGPQSPYDDDDEEPDPYAHYQVAYPESY
GHGGYIQPEFTPVQEEDEQVSMEVRSPGISRFTRSLGRRSPKFLKHG
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgaagggacaacccaacctacacactatgatcgttttgtcgctgttggcggtcacagtt
ttcttctccagccttgggcagagtcaagtgacgccgcccacaaaactaagatttcatgtt
gtgtcacaagacagtgtgcagatttcatggaaagcatccaaagatagaattagaggatat
aaacttcttgtgacaccaaaatcaggtgggaaaaccaaccagctaaatcttaaaaacaac
gccaccagagccatcattcaaagacttgatcctgaccggagttacaatgtacagatcatt
gcctttaatgaagatgatgaaagcaagccagttcgtggagagtttagaattagggatttg
gaaaagaagagaaaaactgccaaaaatccaaagtcggaaagtgagaaccagatcctggag
gaagactcaaagtttgcctgtaagtcgccagccaatgcagacattataatcctggtcgat
ggatcctggagtatcggaagagtgaactttagacttgtaagaagcttcatagagaattta
gttggagcttttaacgttgccgaagataaaacaagaatagggttggcacagtacagtggt
gaccccagaatagaatggaatctaaatacatacgacaccaaagatgccgtacttgatgct
gtccgaaacctgccttacaaaggtggaaacacacttacaggtcttgccttgacatacatt
ctggaaaacagttttaagacagaagcgggagccagaccggatctcccaaagatcggtatc
ttgattacagatggaaaatcacaagatgacgttatcccacctgcaaaaagcctgaaggat
gctggcattgaactttttgctatcggtgtgaaaaatgctgaccttaatgaattgaaggag
attgcctcggaaccacacaacgaccatgtttacaacgtagctgacttcaacatcatggac
tccattgttggatcgctcacaaaaaccgtgtgcgagagagtggaagatatcgacattaat
attaagggagaggtaactgaagtggttggatctccctctgatttggtcacatcggaagta
acagcaagaagtttccgggttagctggagtcatggacaaggcaatgtggaaaaatacaga
gttgtctattaccctaccaaaggaggacaaccagaagaggtgatagtggatggcagtgtg
tccactacggtgctcaagaacttgatgtctctcacagaataccagatagcaatttttgct
gtgtacgccagatctacaacggatgggctgcgaggcagtgaaaccaccttggcattacca
atggccaccgatcttgaattgtatgatgtcactcaccggagcatgagagcaaaatggcgc
ggagttgcaggagctagtggttacatgatcctgtatgcacctctcactgaaggattagca
gcagatgaaaaagagatgaaggttcctgggtccgttactgatgtcgaactggatggcctg
actcccagtacagaatacacagtgacagtctatgcaatgtttggagaagaggccagtgat
ccactcacaggacaggaaacaacactgccgttaagtcctcccagagacctcagattttca
aacatcgagcacagctcggccaccgtctcctgggaccactcgaacaggaatgttaatggt
taccggatcatgtacgtgaaaacgggagagtcggacatcaacgatgtggaagttggccga
atttcaaactacaacctaaagaaactgacatcgctcacagagtacacagtggccattttc
tctgtttttgatgaaggacaatctgagcccctcacaggcacttttacgacaaagccggtg
ccatctcctcgtgatttgaaagtcagggatatctcagcacgcagttttgtggcttactgg
acacattttgcaccagatataactatgtacagactccaatggacaccccggagaggtggt
gctacgcaagaggatgaaattaaaggggatatcagctcctatcttattgatggcttgaca
catagcacagagtatgaagtctccttgacagctatgtttgctgatgaatctgaaagtgat
gctctgtcagctttggctactacactgactcggaccactcaagccccaactacagccaga
cctacaacagcagctatccgttttggaatcagaaaccttttaatagatgatgaaaccaca
tctagtcttcacgtatcatggttaatgactgatgctaacattcgccagtatatcgtatcc
tacatcactacttatggagatcgggaagaaaaagttgtatcaggtcgagaaaacgatgtt
gtgctgcaacctctgctgtctgacactgagtacaaagtcactgtgactcccgtgtacttc
agtggagaagggaaccctgtgtccagctctgggagaacattgccgctctctgctccaagg
aacctgcgggtttctgacgaatggtataacaaactgaggataacatgggaccctcctcct
tcaccaaccatgggctacagaatagtgtacaagcctaccagcggttcaggtccggctctg
gagacttttgtgggtgatgatgtgaacaccatattgattctcaatcttctcagtgggacg
gaatacaacctgaaggttctggcgtcatattccaccggatccagcgatgccttgactgga
gttggaaaaacattatatcttggagtgacgaatctgagtgcgtaccaagtgaggatgaac
agcatctgttcccaatggcaactgcaaagacatgcaacctcctacaggatcatcatcgag
tcactgcaggatggctccaagcaagaagccaacctggctggaggaacgtctcgtcactgt
ttctatgaactcctgcctaactctagatacaggatcaccgtctatgcacagatgggggag
gccgagggacccggcgtcagcattgtagaaacaacactgccggctgcaactgcagcacca
accaaacctccaactccaccaccaaccattcctgtggcacgagaagtgtgtaagtccgca
agagcagaccttgtattcctggtggatggatcctggagtatcggagacgacaacttccac
aaagttatcaacttcctttacagcacagccggagccatggatgagattggccctgaggca
acacaggtcggagtcgctcagtacagtgatgacgcgaggacagaatttaagctaagctca
cataaaagcaaggcttctcttttggctgctataaatgcaatatcgtacaaaggcgggaac
acaaagacaggcagagcaatcaagcacgtcagagaagatttgtttactgtggaatctggc
atgaggaaaggtgtgccgagggttttggtggtgattaccgatgggcgctcccaagatgaa
actgttaagtttgccagtgagatgcatttggaaggcttcagcatttttgccattggcgtg
gcggatgcagactacaatgaattagtgaacattgccagcaagcccagcgagagacacgtc
ttcttcgtcgatgactttgatgggttcaagaaaatagaagatgagctggtcactttcatt
tgcgagacagcgtcagcaacttgcccttgggcctacatccaagggaacagcgtgtcaggt
tttaaaatgatggacatgtttgggttggtgcagaaggaatactcctccttggatggggtc
tccatggagcctggaacttttaataacttcccatgctacaggatacacaaagatgctctg
gtgtctcagcccacgaaacatatccatccagagggcctcccttcagattataccatctcc
ttccttttccgactactccccgatactccgaaggaaccttttgcactgtgggaaatcttg
aacaaaggctacgagccattggttggcgtaatacttgacaataatggtaaaacactaact
ttttttaattacgacaataagggacagtttcagactattacctttgaaggacctgaggtt
agaagaatattccatggcagctttcataaggtacatattatagttacaaagactaattcc
aagctaatcatcgactgcaaacaagttggggaaaagccattaaacgttgctggaaatatc
accacggatggtctagaagtcctaggccggatggtgagatcccgaggagccagagacaac
tccgctccattccagctgcaaatgtttgacatcgtgtgtacatcaacctgggccaatcgt
gacaagtgctgtgagctacctgcaatgagagatgaagccacctgtcctcctcttccaaat
tcctgctcctgcgccgaggagaacaaaggattacccgggcccccaggacctccgggtggt
gctggtatgagaggacccaaaggagcacaaggggatcaagggtcatcggggccagatgga
ctgcaaggcccaataggcccagctggagctcagggaccacctggaccacagggaccaagt
ggacattccattcagggaccatctggtcctcctggtgtaaaaggagataaaggagaagct
ggaaatcaaggaaatcagggacttcctggccaaccagggtctcctggaatagaaggacct
acgggacaaagggggtttccaggaaaggatggcacatccggaccccctggaccgcctgga
tcaatgggtacgccaggtaatccaggatccccaggctctccaggaggcccaggacgtcag
ggtgagaatggaccaccgggtcctcctggtataaaaggagaaagaggagaaagaggggac
acccagtcacagaacatggtccgttcaattgctcgccaagtgtgtgagcaaatcatacag
agtcacatggccagatttaattcactcctgaaccaagtaccaagtcagtctgtatcagtg
agaagtatcgctgggcctccaggacagccaggcacacagggcccacaaggtccacctgga
gaacaaggatctcctggaagaccaggattcgatggcacccccggctcaccaggaacacca
ggagagagaggtttatctggtgaaaagggagagagaggaaactccggagtgggaacacag
ggaccgaggggtccaccgggagctccaggatcacccggtgaaggtcgtactggaagccaa
ggtccagttggggctcctggtcagcgtggcctcccaggtccttcaggtaatactggtcct
atgggtcctcctggtccacaaggttattgtgatgctgcctcctgtgctggatatggtggg
tatgggggacaacctgatcaaggttctcctgaaagctatggcccgcaaagtccttacgat
gacgatgatgaggaaccagatccctatgcgcattaccaagttgcctacccagagtcctat
gggcatggtggttacatccagccagagttcaccccggtacaggaggaggatgagcaggta
tctatggaggtgaggtctcctggaatcagtcgttttacccgtagccttggaagaagatca
cctaaatttctgaaacacggttaa
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integrated database retrieval system
