Nanorana parkeri (Xizang Plateau frog): 108786516
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Entry
108786516 CDS
T04897
Name
(RefSeq) neurogenic locus notch homolog protein 1-like
KO
K02599
Notch 1
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108786516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
Ank_4
Ank_3
Notch
Ank_5
EGF_3
NODP
NOD
C8A_B_C6_EGF-like
DL-JAG_EGF-like
Motif
Other DBs
NCBI-GeneID:
108786516
NCBI-ProteinID:
XP_018411336
LinkDB
All DBs
Position
Unknown
AA seq
2101 aa
AA seq
DB search
MGTQWMFLLLFPLPLCQALQCENSQDSCLNGGTCMRLQNGTHLCSCLGGFQGDRCQFADP
PCSPFLCHNGGTCKRLSSSEYRCTCGPGWTGKHCELIDHCTTNRCMNKGKCVNKDVNPRG
GFECQCQRGYTGEACEKDVDECQEAGICKNGGTCKNTVGSFLCVCPAMYDGINCEMRRGR
CSIHSCLNAGTCHQRNLNLYQCACPPGYTGSDCEENIDDCINHKCKNGGSCIDGLEKYTC
KCPPGWEGGLCSKDIDECQTPGICRNGGTCQNTYGGYKCVCVNGWDGDNCEHNIDDCATA
TCAEGSTCIDQVGTYICQCPPGRIGLLCHMEDGCKKNQCHPEATCDTDPSSHRIFCRCQP
GYTGPTCYEDLDECQLGPSPCEHGGECVNTEGAFLCRCPLGYTGTRCETVQNECNSNPCL
NGASCFDFLGHFECVCAPGFEGILCNQEVSKCSSSPCVNGGNCTDLLNDFHCSCPPGFQG
PRCETDIDECASSPCHHSGLCIDHLGFFTCECLSGFTGQLCEEDINECDSQPCHNGATCL
DQHNGFQCLCEPGITGTTCDMNINECSSDPCLNGHCVDLVNSFMCLCDPGYSGSHCEVDI
DQCRSRPCQNGGICQDVDDGFQCSCPPGTALPLCTLENTTFANTTCLHGSNETQNNSSQC
VCDIGWTGSSCETPIDECASVYCENGGTCHPHQGGYNCSCPAGHTGLNCEIAIQLCYPET
CLNGGTCVENPNITDPSCLCPAGWQGPHCEEDVDECSDDPCKNGASCVNIPGAYSCVCAL
GYTGHHCESALDYCLPDDCQNGGTCLSLLDSFTCICPSAYTGRLCEEHVDSCASSPCQNG
GSCKNRGDSYTCDCVRGYEGTDCGVNIQDCTDTSCLNGGTCVDGIASYSCVCPDRFTGSQ
CQDQLTYCTPDSCKNGGTCHDVPGGYICSCPELYTGGACEDIIDFCARRPCQNGGICSQT
GTRYRCQCAFGWVGSHCETPLLTCKATASRGVDPETLCNRHGNCVDLGASYVCRCFQGYS
GTHCQEKIDPCLPNPCKNGGRCRDISGSPSCQCLHGYHGATCEEKDPCLSKPCYHNGVCV
PKGSNYHCVCPTGTQGARCEINIDDCATAEARCFHGGTCMDGVGGFSCLCPLGYVGDRCE
GDVNECLFNPCDPRGTHTCVQLSNSFQCQCHPHYTGQRCEHIINYCDNNSCANGGICALA
VNTTQGFTCSCPPDFSGPTCSEVILSCKTYTCHNGGLCIQDMEGLPRCVCHRDYTGPHCQ
ESVGSTFSPPQGPWKDCLEVECQRKFRNGVCDQQCNNKPCLYDGFDCNITRSCKADYERY
CQDHFGNGHCETGCDSAECGWDGGDCTSSHEKPGGRLIMVLGYNSSILYRRDIIAQLRAL
SIHLHTKIRLESDSKGDMLFQYCKGDNPEDLSEDQLERWKYETSETCQKSKETVGCVLYL
EVFSLECPLSTCINSSQMAARFLEALNQKGESNLPYSILEVKSLDPPTVPEVLKNQYQWP
LVGTAAGVAVAVIIGVFFGVQLSRKRQHGVLWLPSGFSRQRAQEGSRRREPVGEDSIRLK
PMKHDSVYDDLGPEEGIVPPKSRRLKLATDPSILDHRQWSQKHIDAGVRFPQCIALTPPQ
EEPDGRDIDVRGPDGVTPLMSAICAGGGLEPIGGGGDPPEIESSASVISDLIGQGASLNA
QTDSTGETALHLAARFSRQDAVKVMLDAGADTNVQDRLGRTPLHTAIAADALGVFQTLLR
CRQTDIDARMHDGSTPLILASRLPVQNMVEELVACGADIGAADKRGKSALHWAAAVNNVP
AMKTLLSHGANKDLQDKRDQSALFLAAREGSYEAVCLLLEHQANRELCDHVGHQPRHAAR
ERGHRDIQRLLEESSQLVNRNIPAVPLAGAPQLKKTPRPRAKEITKPAPLPHIDLSSSCY
HNAPPVSAPAFLPGNQSETNCCQSHHAMVNYGGNCAPYARSGSFSSGVAGCQWGHRGWRV
HFCPTGCTVPEASYSAGGQQMSPHAHWLPESQHPQSPNCQNPGPNFCSTPAGEPIPSKDL
PCTPTDQLGHNIYLTPPSSQYGYPSPASPEETQSTQKTCMHHHPFLTPSPESRNPWGIAS
P
NT seq
6306 nt
NT seq
+upstream
nt +downstream
nt
atgggcacccaatggatgtttttactcctcttccctctgccgctgtgccaagctttacag
tgtgaaaattcccaggattcgtgccttaacggaggaacgtgtatgaggctccagaatgga
actcacctctgcagctgccttggcggttttcagggtgaccggtgtcagtttgctgaccct
ccatgttcaccgtttctttgccacaatggaggcacatgtaaacgattgtcatcctcagag
tatcgctgtacatgtggccctggatggacaggcaaacactgtgaattaatcgatcattgt
accaccaaccgatgcatgaataaagggaaatgtgtcaacaaggatgtgaaccctcgtggg
ggttttgaatgccagtgccagcgtggctacactggagaggcttgtgagaaggacgtagat
gaatgccaggaagctggcatatgcaagaatggtgggacttgtaagaacaccgtaggatcc
ttcttgtgtgtgtgcccagctatgtacgacggaataaactgtgaaatgagaagaggacgg
tgctctatacacagctgcctcaatgccgggacttgccatcaaagaaacctcaacttatac
cagtgtgcatgcccaccgggctacactggatctgattgtgaggagaacattgatgactgc
attaaccacaaatgtaaaaatggagggagctgcatagacggacttgaaaaatacacatgt
aaatgtcctcctggatgggaaggaggactttgttccaaagacattgatgaatgtcagact
cctggcatatgtagaaatggcggtacttgtcagaacacatacggaggatacaaatgtgta
tgcgttaatggatgggatggtgacaactgtgaacacaacattgatgactgtgcaacagcc
acttgtgctgaggggtctacctgcatcgaccaagtggggacgtatatctgccagtgcccc
ccaggaaggattggtcttctgtgccacatggaggacggatgtaaaaaaaatcaatgtcac
ccagaagccacttgtgatactgatccctcgtcccacaggatcttttgccgttgccagccg
ggctataccggacccacttgttatgaagacctggatgaatgccagttaggtccttccccc
tgtgaacacggtggagaatgtgtaaatactgagggcgccttcctgtgtcgctgccccctc
ggatatacgggcacccgctgcgagacagtccagaatgagtgcaactccaatccctgcctc
aacggagcctcatgctttgacttcctgggtcactttgagtgtgtgtgcgctccaggattt
gagggaattctctgtaatcaggaagtaagcaagtgttcaagttctccctgtgtaaacgga
ggaaactgcactgatctgttaaatgattttcattgttcctgtccccctggttttcagggc
ccaagatgtgaaaccgacattgacgaatgtgccagttcaccgtgccaccactctggcctc
tgtatagatcaccttggtttctttacctgtgaatgcttgagtggattcacagggcagctg
tgtgaggaagacattaacgagtgtgacagtcaaccatgccataatggcgccacctgcctg
gaccaacacaatggcttccagtgtttgtgtgagcctgggatcacaggtaccacatgtgac
atgaatattaatgaatgtagcagtgacccatgccttaacggacattgtgttgacctggtg
aattcatttatgtgtctttgtgatcccgggtattcaggcagtcattgtgaagtagacatt
gatcagtgcaggtccaggccatgccagaatggaggcatctgccaagatgtggatgatggt
tttcagtgttcctgccctccaggaacagcccttcccctgtgtaccttggagaataccacc
tttgccaatacaacgtgccttcatggcagcaatgaaacacagaacaacagttctcagtgc
gtctgtgacatagggtggacagggtcatcttgtgaaacccctattgatgaatgtgccagt
gtttattgtgagaacgggggaacatgtcatcctcaccagggtggatataactgctcgtgc
ccagcaggacacacagggttaaactgtgaaattgccatccagctgtgttatcctgagacc
tgcctcaacggaggcacttgcgttgagaaccccaacatcactgacccctcatgcctctgc
cctgcaggatggcaaggtccacactgtgaagaggatgtggatgaatgttcagatgacccc
tgcaagaacggggcaagttgtgttaacatccctggagcatacagctgtgtctgtgccttg
gggtacaccggacatcactgtgaatctgcattagattactgcctgccagatgattgccag
aatggtggtacgtgcctcagtctgcttgactcgttcacctgcatatgtccctctgcatat
acaggaagactgtgtgaggagcatgttgacagctgtgcaagttcgccctgtcaaaatggt
ggatcatgcaagaatcgtggcgactcctatacctgtgactgtgtcagaggctacgagggg
acggactgtggggtgaacatccaggactgtaccgacacttcatgtctaaatggtggcacc
tgtgtggatggtattgcctcctactcctgcgtgtgcccagataggttcacaggaagtcag
tgccaagaccagctgacctactgtactccggattcctgcaagaatggtggtacctgccat
gacgttcctggtgggtacatctgctcctgtcctgaattgtacacaggtggtgcctgtgag
gacatcatagacttctgtgctcgtagaccatgtcaaaatggaggaatatgctctcaaaca
gggacaagatatcggtgccaatgtgccttcggatgggttggaagtcactgtgagaccccg
ctcctgacctgcaaggcaacagcctccagaggtgtggatccagaaactctttgcaacaga
catggaaattgcgtggatttaggggcatcctatgtatgtcgttgtttccagggctactct
ggcactcattgccaggagaagattgacccatgtctcccaaacccttgtaagaatggtggt
cgctgtcgggacatttctgggtccccctcttgccagtgcttacatggatatcatggggca
acctgtgaagagaaagatccatgtctgtccaagccttgttaccacaatggggtgtgcgtg
cccaaaggaagcaattatcattgtgtgtgcccaacaggaacccaaggagcccgctgtgaa
attaatatagatgactgcgccacagccgaagctcggtgcttccatggaggcacgtgcatg
gatggagttgggggattctcgtgcctttgcccgctagggtatgtgggagaccgctgtgaa
ggggatgtcaatgagtgtctgttcaacccttgtgacccacgaggaacacatacctgtgtg
cagctcagcaacagttttcaatgccagtgccacccacattacacaggtcagagatgtgag
cacatcattaattactgcgataataactcttgcgctaatggcggaatctgtgcactggct
gttaacaccacacagggattcacctgcagctgcccaccggatttttcaggtcccacgtgc
agtgaggtcatactgtcttgcaaaacctacacctgccataacggtgggctgtgtatacaa
gacatggaaggccttcctcggtgtgtttgccatcgtgattacacaggcccccattgtcaa
gagtctgtggggtccaccttttctcctccacaggggccctggaaggactgcctcgaagtc
gagtgccagagaaagttccgaaatggagtttgtgaccagcagtgcaacaacaagccttgc
ttatatgacggctttgactgcaacatcacaagaagctgcaaggctgactatgaaaggtac
tgccaggaccactttggcaatggtcactgcgaaacaggatgcgatagtgcagaatgcggc
tgggatggaggtgattgtacttctagccatgagaagcctggaggaagacttattatggtg
ctgggttacaactcctccatactttatcggagagacatcatcgcacagctccgcgccttg
tccatccatctccacaccaagatacgtctggaaagtgacagcaagggagacatgttgttt
caatactgcaagggggacaaccctgaagacctgtctgaagaccagctggagagatggaag
tatgagacctccgagacgtgtcagaagagtaaagagactgttggttgtgtcctgtacttg
gaggtctttagtctggagtgtcccctgtccacctgcatcaactcttcccagatggctgct
cgttttctagaagctctaaatcagaagggagagtcaaacctaccatactcgatcctggaa
gtaaagtctctggatccacctacagtcccagaggtgttgaagaaccagtatcaatggccg
ttggtggggacggctgctggcgtggcagtggctgtaattattggagtgttctttggggtt
cagctaagcagaaagagacagcatggggtcctatggcttccttctggcttcagtcgccaa
cgtgcacaagagggcagcaggagaagggagcctgtaggggaagactccattcggcttaaa
ccaatgaaacatgattctgtctatgatgatttaggccctgaagaaggaattgtgccacca
aaatccagaagacttaaattggcaacagacccatccatccttgaccatcgacagtggagt
caaaagcatattgacgctggggttcgtttcccacaatgcattgctctgacaccgccacaa
gaagagcctgatggcagggacattgatgtgagaggtccagatggagtcactccactgatg
tcggctatatgtgccggaggaggactggaacccattggaggtggcggagaccccccagaa
attgaaagctctgcaagtgtcatctcagatttgattggccagggtgctagtctcaatgcc
caaactgactccacgggagagacggcactccatctggctgcccgattctccaggcaagat
gctgtgaaggtcatgctggatgccggagcagatacgaatgtgcaggacaggctgggaagg
acacctctccacacggctatcgctgctgatgctctgggtgtttttcagaccctgttacga
tgccgtcagacggacattgacgccagaatgcacgatggatccacgccactcatcctagcc
tcacgccttccagtacagaacatggtggaagaactggtggcatgtggagcagacataggt
gcagcagataagcgaggtaaatctgcactacactgggccgctgctgtgaacaatgtacca
gcaatgaagacacttctgtctcatggggctaacaaggatcttcaggacaagagggaccag
tctgcactgttcctggccgctagggaaggtagttatgaagctgtctgcctcctcctggag
caccaagcaaatcgagagctgtgtgatcatgtaggccatcagcctcgacatgcagctcgt
gaacgtggacacagagatatccagcgccttctggaagaaagcagccaattagtcaaccgt
aacatacccgctgttcctctggctggagctccacagctaaaaaagaccccgcgtcccaga
gccaaagagataaccaagcctgcacctttaccgcacatagacctgagcagctcctgttat
cataatgcgcctcctgtttcagcacctgcctttctgccaggcaaccagtcagagaccaac
tgttgtcaatctcatcatgctatggtcaactacggaggtaattgtgctccctatgctcgc
agtggctccttctcatcaggggtagcaggatgccagtggggtcatagaggatggagggtc
catttttgtccaacaggatgtaccgtgcctgaggcctcctactcagcaggagggcaacag
atgtcccctcatgcccactggctgccagaatctcaacatccacagtctccaaactgccaa
aatccaggccccaacttctgttccactccagccggggagcctatcccaagcaaagacttg
ccttgcactcctactgaccagctggggcacaatatctacctgacccctccttcatcacag
tatggatatccatcccctgccagccctgaagaaacacagtctacgcaaaaaacatgcatg
caccaccacccgttccttaccccttcgccagaatccaggaacccctggggaattgcatca
ccataa
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