KEGG   Nanorana parkeri (Xizang Plateau frog): 108787373
Entry
108787373         CDS       T04897                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:npr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:npr01009]
    108787373 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:npr03036]
    108787373 (KDM5B)
Enzymes [BR:npr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     108787373 (KDM5B)
Protein phosphatases and associated proteins [BR:npr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108787373 (KDM5B)
Chromosome and associated proteins [BR:npr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108787373 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN zf_topless
Other DBs
NCBI-GeneID: 108787373
NCBI-ProteinID: XP_018412408
LinkDB
Position
Unknown
AA seq 1520 aa
MEFVPPPECPVFEPSREEFADPFAFINKIRPIAERTGICKVRPPPDWQPPFACDVDKLHF
TPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLFQLNKLVTDEGGF
DTVCRDRKWTKIATKMGFSTGKAIGSHIRGHYERVLYPYTLFQSGASVLASDSNTKMPGY
MDDVGVDKKPNLVQDLKDKEYKPHDIPQRQSVQPSENCAPARRAKRMRAEAVQVKTEPEE
TPEFRPRTLRRRMGSTPSVCDDDENVHVKREPVEIVIEKPKLKSRKGRSPVDLYVCFICG
SGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECSKPQEAFGFEQAARD
YTLRMFGEMADHFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGS
GFPVRNGKFRVKPEDEEYLDCGWNLNNMPIMDPSVLTHITADICGMKLPWLYVGMCFSSF
CWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLEEVMKKLAPELFVAQPDLLHQLVTIM
NPNTLMAHGVPIYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVE
HYRHLNRYCVFSHDEMICKMASKAEVLDVVLASSVQKDLAYMIEEEKTLRESVRKMGVVK
SEKIDLELLADDERQCVKCKTTCFTSAVYCPCSPSNLVCLHHIDALCSCPTHKYVLGYRY
SLDDLYPMMNAVKLRAESYDAWASEVVDALKSTTNKRSLPSLRVLVEESESRKFPDNDLL
RHLRAVVQDADKCGTLAQLLLNGKRHTRFRSGGGKSQNQLTIAELRSFVKQLHSLPCYVN
QTPQLKDLLSRVEEFQTRSQKLLAADMPRASDLQQLLDSSFEFDLELPLKSLRERLEQAR
WLEEQQQACQDPGTLTLDVMRRLIDLGVGLAPHPTVEKAMAKLQELLTMSEHLDDRCKSL
LKARPRHILSALTTVLREAESVPVYLPSVESLRDAVERAREWLQKVENLQAGPRVPVLDS
LADLVSQGRAIPVHLGPLPRLEALVGEVHSWTECATSTFLTSSSPYTLLEVLCPRCDVGS
PGLKRKMRRIKEQTASGGKKKYPKPDGLLELEKALNESKDTATAMATLGQARLREMESLH
TVRISNENRILSREEQNDWKVCICQGAPMAPMIQCELCRACFHSSCITAPKHGSQVWLCP
QCHRSKKPPLEKILPLLASLQRLRVRLPEGDALRYLIERTVNWQHRAQHMLSSVEIKLAQ
ERIGSSQFYNRWQSTAGQLTETSNVSQSVGATSFSLPHEWDNRTAYITSPFSPGRNCIPL
NSLNGELDELLMEAQLLQVSLPEVQELYQALMTQPSTTDPESNLTLSGKDRGPIKQQGTE
WNVSRSEAVYCMTKKERSDSTEKRLKRRHEATERRMRKTPAPRKKRVKTLQSKGLCSREQ
RLDRDSDSQCSFTSESEDENAICPADHCIEPEGDEVDWVQCDGSCNRWFHQVCVGLSAET
AEKEDYMCAHCIDEIAAAHK
NT seq 4563 nt   +upstreamnt  +downstreamnt
atggagtttgtacctccaccggagtgtccggtattcgagcccagccgggaggaatttgct
gacccgtttgcgtttattaacaagatccgacctatcgcggagcgcactgggatctgcaaa
gtccgaccgccgccggactggcaacctccatttgcttgtgatgtggacaaactgcacttc
acgccacgtatccaaagacttaatgaacttgaggctcaaaccagggtgaagttgaacttc
ttggaccagatagccaagttttgggaattacagggatgcactctgaaaatacctcatgtt
gaaagaaagatactggacttgtttcagctaaacaagctggtaactgatgaaggtggtttt
gatacagtctgcagggataggaagtggacaaagatagctacaaaaatgggattctctaca
ggaaaagccatcgggtctcacattagaggccattatgaacgcgttctttacccttacacc
ttgtttcagtctggagcaagtgtgctggcttcagactccaacaccaaaatgcctggatat
atggatgacgtaggtgtggataagaagccaaatcttgtccaagatttaaaggacaaggag
tacaaacctcatgatatccctcaaagacagtctgtccagccttcagaaaactgtgctcct
gctagaagagctaaacgtatgagagccgaggctgtacaggttaaaacggaaccagaagag
acaccagaattcagaccccgaactttgcgccgcaggatgggatctacaccttccgtctgt
gatgacgatgaaaatgtgcatgtgaaacgagagccagtggaaatagttatagagaagcca
aaattaaaatccagaaaaggcagaagcccagtggatttatatgtatgttttatatgtggg
agtggaagtgatgaggaccgtttactcctatgtgatggttgtgatgacagttaccacacc
ttttgtcttattcctccacttcatgatgtgcccaaaggtgactggagatgcccaaaatgt
ctggcacaggaatgtagtaagccacaagaagcatttggttttgaacaagctgcccgagat
tatacactacgtatgtttggagagatggctgatcatttcaaatctgactattttaacatg
cctgttcatatggtacccacagagttggtggaaaaggaattttggcgactagtaagcacc
atagaggaggatgtaactgttgaatatggagccgatattgcatccaaggaatttggaagt
ggatttcctgtgcggaatggcaaatttcgcgtaaagccggaagatgaggagtacctggat
tgtggctggaatctaaataatatgccaatcatggacccttctgtgctaacccatataaca
gctgacatatgtggaatgaagttgccatggctttacgtgggcatgtgtttttcctccttt
tgttggcacattgaagaccactggagttattctatcaattacctgcactggggtgagcca
aagacctggtatggagctcctggatatgctgcagagcagctggaggaagtaatgaagaag
ctagctccagaactgtttgttgctcagcctgacctcctccatcagttggtcacgattatg
aatcccaatacattgatggctcatggtgtgccgatatatcggactaatcagtgtgctgga
gaatttgttataacttttccgcgtgcgtatcacagcggctttaaccagggcttcaacttt
gcagaggctgtgaatttctgcacagtggactggctgcctcttggtcgtcagtgtgtggaa
cattatcggcaccttaacagatactgtgtcttttcacatgatgagatgatatgcaagatg
gcttctaaagctgaagtactcgatgttgtgcttgcatcctctgtacagaaggatttagcc
tatatgattgaagaggagaagacccttcgtgagtctgtccgtaaaatgggtgttgttaaa
tctgaaaagattgatctggagttactagcagatgatgaacggcagtgtgtgaagtgtaag
acaacctgctttacatctgcagtgtattgtccttgcagtcctagcaatcttgtgtgtctg
caccatattgatgctctctgctcttgtccaacccacaagtatgttttagggtatcgctac
agccttgatgatttgtatcccatgatgaatgctgtgaagttgcgagcagaatcctatgat
gcttgggcttctgaggttgttgatgctcttaaatcaacaaccaataaaagaagtctccct
agtctgcgagtgcttgtggaagaatctgaatctaggaaatttcctgataatgaccttttg
cgacacttgcgtgccgtggtgcaagatgctgataagtgcggaactcttgcacagctactt
ctgaatggaaaacgccataccagatttcggtcaggaggtgggaagtctcagaatcagcta
actattgctgagctcaggtcttttgtgaaacagctgcattctctcccatgttatgtcaac
cagacacctcagctcaaggatctcttaagccgcgtggaggaattccaaacgcgcagtcag
aagcttttagcagcagatatgcccagagcaagtgatttgcagcagcttcttgattccagc
tttgagtttgacttggaattacccttaaaaagtttgcgagagcgcttggaacaggcccgc
tggttggaggaacaacagcaagcctgccaggatcctgggacattaacactggatgttatg
aggagacttatagatttgggtgtgggccttgctcctcatcctactgtggaaaaagcaatg
gctaagcttcaggagctcctaactatgtcagaacatttggatgaccggtgcaaaagtctg
ctcaaagcaaggccccggcatattcttagcgctttgacaactgtcttgcgggaagcagag
agtgtccctgtttaccttccaagtgtggagtctttaagggatgctgttgagagggcccga
gaatggctacagaaggtggagaacttgcaggctgggcctagagttcctgttttggacagt
ttggctgatcttgtgagtcagggcagagcaattcctgtccatcttggacctttgccaaga
cttgaagcccttgtgggtgaagtccattcctggacagagtgtgccaccagcacattttta
acatctagctctccttacactttgttagaggttctctgtcctcggtgtgatgttggctct
cctggtctgaaaagaaaaatgagaaggataaaggagcagaccgcttcaggggggaagaaa
aaatacccaaagccagatggcctgctggagcttgagaaagcactgaatgaaagcaaagac
actgctactgctatggcaactctgggtcaagcacgactgcgtgaaatggagtctttacat
actgtacgcatctctaatgagaacagaatcttgtcaagggaagagcagaatgactggaaa
gtgtgcatatgtcaaggagctccaatggctccaatgatccaatgtgagttgtgccgagcc
tgcttccactctagctgcattactgccccaaagcatggatcccaagtctggctgtgtcca
caatgtcaccgctcaaagaaaccacctctggaaaagattctccctctattggcatcacta
cagcgtttacgtgttagactaccagagggggatgctctccgctatcttattgagaggaca
gtgaactggcagcatcgggcacaacatatgttgtcttcggtagaaataaaactggcacag
gaaagaatcggctcaagtcagttctacaacagatggcaatccactgctgggcagctgaca
gagacttctaatgtatcacagagtgttggggccacatctttctctttgccccatgagtgg
gacaacaggacggcatacatcacctctccattttctcctgggcgtaattgtattcctcta
aacagtctgaatggtgaactagatgagttgctgatggaagctcagcttttacaagtctca
cttcctgaagtacaagaattgtatcaagcgcttatgacccagccaagcacaacagaccca
gagagcaacttaactctctccgggaaagaccgggggcccattaaacagcagggaacagaa
tggaacgtgtcacgttctgaggctgtgtactgcatgacaaagaaggagaggtcggacagc
acagagaaaaggttgaagaggcgtcatgaggctacagagaggaggatgaggaagacacca
gctcctaggaaaaagagggtgaaaactctgcagtccaaaggcttatgtagtagagagcaa
cgtcttgatagagacagtgactcgcaatgttctttcacatctgaatcggaggatgaaaat
gcaatttgtccggcagatcattgcatagaacctgaaggagatgaggttgactgggtgcaa
tgtgatggaagctgtaatcgctggtttcatcaagtttgtgttggtctttctgctgaaact
gctgagaaggaggattacatgtgtgctcactgcattgacgagattgccgctgcacacaaa
taa

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