Nanorana parkeri (Xizang Plateau frog): 108788363 Help Entry 108788363         CDS       T04897                                  Symbol COL11A2 Name (RefSeq) collagen alpha-2(XI) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism npr  Nanorana parkeri (Xizang Plateau frog) Pathway npr04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:npr00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     108788363 (COL11A2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:npr00536]     108788363 (COL11A2) Glycosaminoglycan binding proteins [BR:npr00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    108788363 (COL11A2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1 Motif Other DBs NCBI-GeneID:  108788363 NCBI-ProteinID:  XP_018413619 LinkDB All DBs Position Unknown AA seq 1802 aa AA seqDB search MPRPQWPRRCRVPGVPPLCSLALLLLWQLVRTQAAADPVDILKGLKFHTQPEGVKKTSGL CPARRSSTGGDVAYKISKQAQISAPTRQLFPGKFPEDFSIMALFRAKSGTQAFLLSIYNG DGIQQIGVEVGRSPVFLYEDQHGNPKPEDYALFSGVNLADGKWHRIALSVQKKSVTLILD CKKKITKPLPRGNKPIVDTKGITVFGMRFLDEESFEGDIQQLLVASNAQAAYDYCEHYSP DCDSALLNTPQAQDPNTRQDYTEEEVEYYEYPYYYDNKEEGTPNPPTEISAPEGDTVEKD PAPPSEPIMTPEPALLEQSLDYTVSPYEEEAYGAWEEEPTPETKPDPQEKEQPPSTDVKG SDSFTAEYVTGEEENPTVGLDYEYVYKDYHEGSESSQLGPVLSAETPESGGAISGPRGVK GDKGEPAVIESGMLVEGPPGPEGPAGYSGPPGTQGHPGPVGDPGERGTPGRPGLSGANGL PGPPGSSVMLPFRFGSSGGDKGPVVAAQEAQAAAILQQARLALRGAPGPMGYTGRSGPLG PPGSPGTKGEGGDLGPQGPRGPQGLSGPPGKAGRRGRSGADGARGLPGEFGSKGDRGFDG LPGLPGEKGNRGDSGTQGPLGPPGEDGERGSDGEVGPRGLPGEPGVRGLLGPKGPPGNPG SNGVRGMDGPVGQKGNLGPQGEPGPPGQQGTPGTQGLSGPQGPVGPPGEQGPLGKPGLPG IPGSDGPPGHPGKEGYSGTKGNQGPLGPQGSIGYPGPRGGKGIDGIRGLKGHKGEKGEEG FTGFKGDFGIKGDKGEGGVPGSRGEDGSEGPKGRSGPPGDPGPLGLLGEKGKLGVPGLPG YPGRQGTKGSLGFPGFAGANGEKGARGLSGKSGPRGERGPSGPRGQRGPRGATGKSGPKG TSGGDGPSGPLGERGLPGPQGTNGFPGPKGPPGPPGKDGIPGHPGQRGEVGFQGKMGTTG PPGVVGPQGNAGESGPMGERGHPGPPGPPGEQGLAGPSGKEGTKGDPGSLGVPGKDGPAG LRGFPGERGLPGTPGGPGLKGNEGPAGPPGPAGSPGERGGPGQGGPIGLPGRPGPQGPAG AAGEKGVPGEKGPIGPAGRDGLQGPVGLPGPAGPPGISGEDGDKGEVGEHGPKGGKGNKG EHGPPGPPGPNGPVGQPGTPGADGEPGPRGQQGIFGAKGDEGTRGFPGSPGPIGLQGLPG PGGEKGETGDVGPMGPPGPPGPRGPAGPSGADGPQGPPGGIGNLGPLGEKGEPGETGEPG IQGELGPKGPRGDRGEKGESGQSGDAGPPGGKGPMGDDGPKGNPGPVGFPGDPGPPGEMG PRGQDGAKGERGEDGEQGEAGSPGPTGENGPPGPLGKRGPAGPPGPEGRGGEKGAKGENG ALGPQGKTGAVGPQGTAGKQGPEGLRGLPGSVGEQGRPGATGQAGPPGPVGPSGLPGLKG DGGAKGEKGHPGLIGLIGPTGEQGDKGDRGLPGPHGSNGQKGEPGIAGVTGPIGPGGSAG SPGSPGPKGAKGATGQAGPKGQKGIQGPPGAPGPPGEAIQPLPFQMPKKNKRSIDASQFM AEEPAVEYTDGMEEIYGSLNAIKKDIESIKAPKGTKEHPARTCQDLQLSNPDLPDGEYWI DPNKGCARDSFKVFCNFTAGAESCIFPSKRIEKVKMSPWSSEKKETWYSKFRSGSRFSYV DLDDNPIGVVQLTFLRLLSVGARQNFTYHCHRSAAWHLASGDTYQKALHFMGSNDEDLSF HTSPYIKALRDGCAARKGTDKTVLEVHTPLVDQLPLRDVMFMDFGEPNQKFGFEVGPVCF LG NT seq 5409 nt NT seq  +upstreamnt  +downstreamnt atgccccggcctcagtggcccaggagatgcagggtccccggggtgccccctctctgcagc ctggcgctgctcctcctctggcagctggtgaggacccaggcggcagctgaccctgttgac attttgaagggcttgaaatttcacacacaacccgagggtgtaaagaagacctctggcctt tgtccggcccgccgttcaagcactggtggagatgtggcctacaagatttcaaagcaagct cagattagcgcccccacgaggcagttattcccaggtaaattcccagaggacttctccatt atggcccttttccgggcgaagagtgggacgcaagccttcctcctgtctatatacaacggg gatggaatccagcagatcggagtggaggtgggacgctctcctgtcttcctgtatgaagac cagcacggaaatccaaaacctgaagactatgctttattcagcggggtcaatctggccgat ggaaaatggcatcgcattgctctgagcgtacagaagaagtccgtcactttaatactggac tgtaagaagaagataacgaagccactcccgcgagggaacaagcccattgtcgacactaaa ggaatcactgtattcggaatgaggtttttggatgaagaatcatttgagggtgacattcag caactacttgtggcaagcaatgcccaggcagcttacgactactgtgaacactacagtccg gactgcgactctgcactgctgaacacgccgcaagcccaggaccccaataccaggcaagat tatacagaggaagaggtggagtattacgagtatccatactattatgacaataaggaggaa gggacgcctaacccacctaccgaaatcagtgcccccgagggggacacagtggagaaggac cctgcccctccttctgaacctatcatgacccctgaacccgccttgttagagcaaagcctt gattacactgtatcaccatacgaagaggaggcttatggggcttgggaggaagagcccacg cctgaaactaaacctgatccacaggaaaaggaacaacctccttctacagatgtcaaaggt agcgattccttcacagcggagtatgtaaccggagaggaggaaaatccaactgtcggtctg gactatgagtatgtgtacaaggattatcatgagggctcggagagttcacaacttggccca gtcctctctgcagagactcctgagagtggaggtgccatcagcgggccccgtggggtgaaa ggagataaaggagaacctgctgtcatagagtcaggaatgctggttgaaggtccaccagga ccagaagggcccgctgggtattcaggtccccctggaacacaaggccatcctggacctgtt ggtgaccctggagagaggggtaccccaggtcggcctggtctctctggagccaacgggttg cctggaccacctggtagctctgttatgcttccgttccgatttggaagcagcggtggtgac aaaggccctgtagtggccgcacaggaagctcaagcagcagctatattacagcaggccaga ctggctttacgtggggccccaggaccaatgggttacactggaagatctggacctttgggt ccaccaggaagtcctggaacaaagggggaaggtggagatcttggtcctcaggggccaaga ggaccacagggcttgtccggacctccaggaaaagcaggaagacgaggtcgctctggtgct gatggggctcgtggtctgcctggtgaatttggcagcaagggtgacagggggttcgatgga ctgcctggattgccaggagagaaaggcaaccggggagattctggaactcagggtcctctg ggtccaccaggagaagatggagagaggggaagtgatggagaggtcggaccccgtggactt cccggtgaaccaggagtccggggactgcttggacctaaaggcccacctggcaacccaggc tcaaatggagtaagaggtatggacgggccagtgggacagaagggaaatctgggtccacaa ggtgagccaggccctcctggacagcaaggaactccaggcacacaaggtctttctgggcca caaggtcctgtgggtccaccaggagagcagggccctctgggcaagcctggccttcccgga attccaggctctgatggacctcccggtcatcctggcaaagagggttattcaggcaccaag ggaaaccagggtccacttggtccacaaggttcaattggttatcctggtcctcgaggtgga aagggaattgacggaatcaggggccttaaaggacacaaaggagagaagggtgaagagggt ttcacagggttcaaaggggactttggtataaaaggtgataagggtgagggcggagtccca ggctcaagaggtgaggatggctctgagggccctaagggaagatccggcccccctggtgac ccaggtccccttggattgttgggtgagaagggcaagctgggtgttccaggtctgccaggc tacccaggacgtcaggggacgaagggatctctcggcttcccaggattcgcaggggccaac ggagagaagggagcaaggggtttgtctggaaaatcaggtccaagaggagagaggggccct tcgggacccagaggacaaagagggccaagaggagccactggaaaatcaggaccaaagggt acatctggtggtgatggtccatcagggccactgggagagagaggtcttcctggaccgcaa ggtactaatgggttcccaggaccaaaaggacctcctggtcctcctggtaaagatggaatc cctggacatcctggacagagaggagaagtgggtttccaaggtaaaatgggaaccaccgga cctccaggtgttgtgggaccacagggtaatgcaggagaatctggtcctatgggagagaga ggacatcccggcccacctggaccaccaggagagcaggggttggcaggcccatctggaaaa gaaggtaccaagggagaccctggatcccttggtgttcctggtaaagatggacctgctggt ttaagaggtttccccggagaaagaggcctacctggtacaccaggtggtccaggtctaaag ggtaatgaaggtccagcaggtccacctggccctgcaggatctcccggagaaagaggtgga ccaggccaaggtggaccaattgggcttcctgggcgaccaggccctcagggaccagcaggt gcagccggagaaaagggtgtaccaggagagaaaggaccaattggccccgcaggtagagat ggtttgcaagggcccgtgggtcttcctggaccagctggacctcctggtatctctggagaa gacggtgacaagggtgaagttggagagcatggcccaaaaggtggcaagggtaacaaggga gagcatggtcctccgggtccacctggtcctaatggccctgtgggacagccaggtactccg ggtgctgatggagagcctggtccacgtgggcagcagggaatatttggagcaaaaggagat gaaggtactcgtggattcccaggatctcctggacctatcgggctgcagggattaccagga ccaggtggagaaaagggagagactggtgacgttggacctatgggcccacccggacctcct ggaccacgtggccctgctggcccatctggagctgatggtccacaaggtcctcctggtgga attggaaacttgggacctttaggagagaagggtgaacctggtgagacaggcgagcctggc atccaaggagaacttgggcctaaggggccacgtggagacagaggagaaaagggagagtct ggccaatctggtgacgctggacctccaggtggaaaaggacctatgggtgacgatggaccc aaaggaaacccaggtcctgtaggtttccctggagatcctggcccccctggagagatggga cctagaggacaagatggcgcaaagggtgaaagaggagaagatggagaacaaggagaggcg ggatctcctggtccaactggtgagaatggaccccctggacctcttggcaagagaggccct gctggtccacctggtcctgaaggacgtggaggggaaaaaggagctaagggagagaatgga gctttgggacctcaaggaaagacaggagctgttggacctcagggaactgcaggaaaacaa ggtcctgaaggactgagaggcttgcctggttctgtgggtgaacaaggccgtcctggtgca acaggtcaagccggaccaccaggtccagtgggaccttctgggttgccaggcttgaagggg gatggtggagctaaaggagagaagggtcaccctggacttatcggtcttattggacctact ggagagcaaggagataaaggagacagaggccttccagggccacatgggtcaaatggacag aaaggagagcctggtattgctggtgtcactggtcctatcggtccaggtggatctgctggc tctcctggttctccaggtcctaagggagctaaaggagccacgggacaagctggacccaag ggacagaagggtatacaaggtcctcctggagctccgggcccaccaggggaagccatccag cctttgcccttccagatgcccaagaaaaacaaacgttccattgacgccagtcagtttatg gcagaagagccggccgtggagtataccgatggcatggaggaaatctatggctctcttaat gctataaagaaggacattgagtcaatcaaggcaccaaagggtacaaaggaacacccggct aggacatgccaggaccttcaactgtccaatccagatcttccagatggtgaatactggatc gatccaaacaagggctgcgcacgggactccttcaaggtcttctgtaacttcactgcaggg gccgagtcttgcatcttccccagcaagcgcatcgagaaggtgaagatgtctccctggagc tctgagaagaaagagacttggtacagcaaattcaggagtggtagtaggttctcttatgtg gacctagacgataaccccattggagttgtccaattaaccttccttcgcctgctaagtgtg ggtgctcgtcagaacttcacttatcactgccatcgctctgctgcctggcacctggcctcg ggtgacacctatcaaaaggcattgcacttcatgggctccaatgatgaggatctctccttc cacacaagtccatacatcaaggccctcagagatggctgtgcggcaaggaagggcacagac aagacagtattagaggttcacacccctcttgtggatcagcttcctttgagagacgttatg ttcatggactttggagaacccaaccagaaatttggctttgaagtgggacctgtatgtttt ctgggctga

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