KEGG   Nanorana parkeri (Xizang Plateau frog): 108789516
Entry
108789516         CDS       T04897                                 
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04510  Focal adhesion
npr04512  ECM-receptor interaction
npr04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:npr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108789516 (COL9A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108789516 (COL9A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108789516 (COL9A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:npr00535]
    108789516 (COL9A3)
Proteoglycans [BR:npr00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   108789516 (COL9A3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 108789516
NCBI-ProteinID: XP_018415056
LinkDB
Position
Unknown
AA seq 676 aa
MVWFPALGFLLLVHLVAPQAPRAGPPGPPGPPGPSGIPGKDGIDGEVGPAGLPGPAGPKG
APGKPGEAGKAGLSGLPGIDGLTGPDGKAGPDGPPGGRGDIGPPGPDGPPGRGPTGPPGL
AGPSGLPGGKGPQGPSGPAGQPGLPGPPGPPGPPGLPGVVPDSNGDLQCPAVCPPGPPGP
PGMPGFKGHTGHKGDIGESGKDGQKGDPGPPGPAGIPGSVGLQGPRGGRGLVGPQGPGGD
RGDTGFRGPSGAPGPPGKAGDQGVRGPQGYQGPKGDTGKPGPKGMPGGLGPIGEPGMLGK
DGRDGTSGLDGAKGDQGRPGVPGEKGPNGLPGLGGKAGTKGEKGQLGSNGELGEAGPSGE
PGIPGEAGPPGERGEAGPRGVAGGIGLQGPIGVAGVRGFQGPKGNIGDPGLPGPTGIRGG
FGERGPVGASGPKGSEGIAGSDGLPGEKGEMGPFGPVGQKGEPGVRGELGPKGISGPNGT
AGVLGVPGPPGPMGFQGEQGVPGLTGKSGVPGKLASEQQIRELCGGMISDQIAQLAANLR
RPLAPGAVGRPGPPGPPGPQGEIGRVGHPGARGPPGYSGPTGELGDPGSRGLSGDKGDKG
AVGRGIDGPPGDQGEQGALGALGISIDGRDGSYGEPGYPGESGRPGAIGAHGTPGICDTS
ACQGAMAAEKSGSRKS
NT seq 2031 nt   +upstreamnt  +downstreamnt
atggtctggttcccagctcttgggttcctcttattggtccacttggtggcccctcaggcg
ccgagagcgggacctccaggaccacccggcccacctggaccttctggaataccaggcaag
gatggaatagatggtgaagtcggacccgctggtttacctggacccgcaggtccaaaaggt
gccccaggaaaaccaggagaagctggaaaagctggcttgtctgggcttccaggaattgat
ggactcaccggacctgatgggaaggctggacctgatggacctccaggaggaagaggggat
attggaccacctggaccagatggacccccaggaagaggaccaactggacctcctggtcta
gctggaccgagtggcttaccaggcggtaaaggaccccagggaccatcgggacctgcaggt
caacctggccttcctggccccccaggcccaccaggccctccgggtcttccaggagttgtt
cccgacagcaacggagatttgcagtgtccggctgtttgcccacctggcccacccggtccc
cctggcatgccaggatttaagggtcacacagggcacaaaggagatataggggagtctgga
aaggatggacagaagggagacccaggaccaccgggaccagcaggaatccctggcagtgtg
ggcttacagggcccaagaggtggaaggggcttagtcggaccccagggaccaggaggagac
aggggagacaccggatttaggggaccctccggcgctccaggaccacctgggaaagctggg
gatcaaggtgtgagggggccccagggataccaagggccaaagggagacacgggcaaacca
ggacctaaagggatgcctggaggtctgggccctataggagaaccgggaatgcttggaaag
gatggacgagatgggacctctggcctggacggtgcgaagggtgatcaaggacggccagga
gttcctggagagaagggaccaaatgggctacctgggcttgggggtaaagctggaacaaag
ggagaaaaaggtcagctgggcagcaatggagagctgggagaagctggaccctctggagag
ccaggtattcccggtgaagccggccccccaggagagagaggagaagccggccccagagga
gtggctggtggaattggattacaaggacccattggagttgccggagtgagaggcttccag
ggtccaaaaggcaacattggtgaccctggcttaccaggacctactggcatccgtggtgga
tttggtgagcggggtccagtaggagcttcgggacccaaaggaagcgagggtatcgctggc
tctgatggacttccaggagagaagggagaaatgggaccgtttggaccagttggacagaag
ggagagccaggagtgagaggtgaactaggtcctaagggtatttctgggcccaacggcaca
gctggagtactaggcgttcccggcccaccaggaccaatgggattccaaggagaacaaggc
gttccaggattaaccgggaaatctggagtccctggcaagctggccagcgagcagcaaatt
cgggagttgtgcggtggaatgattagcgatcaaattgcacagctagctgctaatctcaga
aggcctttggctccaggagcagttggtcggccaggtcctcctgggccacctggacctcaa
ggtgaaattggacgtgtaggacatcctggtgctcgtggaccacctggatatagtgggcca
accggagaactgggtgatcccggttctagaggtttgtcaggcgacaaaggcgacaaagga
gcagttggacgaggcatcgatggtccacctggtgatcaaggagaacaaggtgccctagga
gcccttggcataagtatagacggccgggacggttcctacggcgagcccggttaccctgga
gagtctggaagacccggtgcgataggagcccatggtaccccgggaatatgcgacacctcc
gcttgtcaaggtgccatggctgcagaaaaatcgggttccaggaagtcataa

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