Nanorana parkeri (Xizang Plateau frog): 108790826
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Entry
108790826 CDS
T04897
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108790826 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npr03000
]
108790826 (ARID1A)
03021 Transcription machinery [BR:
npr03021
]
108790826 (ARID1A)
03036 Chromosome and associated proteins [BR:
npr03036
]
108790826 (ARID1A)
Transcription factors [BR:
npr03000
]
Eukaryotic type
Helix-turn-helix
ARID
108790826 (ARID1A)
Transcription machinery [BR:
npr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108790826 (ARID1A)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108790826 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
108790826
NCBI-ProteinID:
XP_018416683
LinkDB
All DBs
Position
Unknown
AA seq
1828 aa
AA seq
DB search
MPRTSQPTSPMDQMGKMRPQPYGATNPYSQQPGPQQGHSGYPVQPYSSQTPQRYPMAMQG
RPQGAIGIQYGQQMSSYGQQGPGPYSQQSQSPYYNQQALHPPQQQTPPQSQYSQQQPAPQ
SYSQQTSSTQPPSSQPVQPNFTQQQQSPSPSPYTQQQQQGPPTSSQSQSPYTQQAPQYPT
SQQQGSSYSASGAQQGSTYSQQRFPPPQELSQDSFTSQASSTPSMGSSKGQDELSMGMQP
RPSSLPDLSGSIDDLPMGAEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRG
PSPSPVGSPASVAPSRSGPLSPTSVPGTQMPPRPPSVQSDGLIHPTMNQAALGQERGYMQ
RNAQIPQYGSPQPGPALSPRQSTGAQMHAGMGPYQQNSMGSYGPQGSQYGPQGGYPRQPN
YNAMPNAGYSGGGMAPLVTGGQIHGQGGMPQYGGRMAHSAMGNRPYGPNMGSMPPQVGSG
MCPPPGGMNRKAQDTAGMHGTANSIQSRSPGYPNMNQGGMMGAGPPYGQGINSMAAMMNT
QGPPYMGGNMANNSGMAGSPELMGLSDVKLTQTTKMNNKADGTPKTETKSKKSSSSTTTN
EKITKLYELGVEPERKMWVDRYLSFTEEKAMSMTNLPAVGRKPLDLYRLYMSVKDIGGLT
QVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFSSAEAKK
QAKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPMPGMRNNSGLQ
DAYDGSDPSYQKRNSMTPNPGYQTDMMGRMPYESNKDPYGGMRKGADPFMSSGQGPSGAM
GDPYSRAPGPAMSNMAQRQHYPYSSYDRVRPEPGLGPEGNMASGGTQPNMIPSTTDSGMY
SPGRYPQQRHDSYSNQYPTQGTSSGSPYPSQQNPMYQQQNYKRPMDGSYGPSSKRHEGEI
YSAAYAGPQSVQGQPQAQPQQQTPGSGVPPAGQPSPAPSSQQTQDPYGQYGSNYPQSAGE
RRPPPSGQNQFPFQFGRERVPAAPGNSTQPPLPPSGMAVSAEASQPGAMWQGRGEMGYNY
QGRPGPPTSSTQGPNYHSGPPRGEDILLSDQRLSHEGQWQPHVNRQQPPYVPAPGPPLTR
PPPQSGYQASPSMPNHLPQVASPATPRPLEAHTSPSKSPFLKMQKAGPPVPASHIVPTPT
QPPLIRRDITFPPGSVEATQPILKPRRRLTAKEIGTPEAWRVMMSLKSGLLAESTWALDT
INILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIYGILREYEVGEPGQKNLLSPSSR
NSQSPLISDAEYSDGDGFQSLDDDLQSEDEEERKAYSAPCVGNEDTQRHVSKFDKLPIKV
VQREDAFVLDCSHRLGRLQEFDSGLLHWRIGGGDTTEHIQTHFERRPDPPVRKRSQGKRR
SREQQVTGAEDTAPTIDDVLCSRSSSLPSEGGEIPKEDTEFALGGSPPSRSRHGLKILED
EPRSKDETPLCTLEDWQDALSRRCVCISNILRSLSFVPGNDLEMSKHPGLLLILGKLVLL
HHKHPERKQAPLTYEKEEERDQGVSSNKAEWWWDCLEMLRENTLVTLANISGQLDLSPYP
ESICLPILDGLLHWAVCPSAEAQDPFVTLGPNAVLSPQRLVLEALSKLSIQDSNVDLILA
TPPFSRLEKLYGTLVRFLSDRKNHVCREMAVVLLANLAQGDSLAARSIALQKGSIGNLLG
FLEDSLAATQFQQSQAAHLHGPSAPFEPTSTDMMRRASRALLALAKVEENHSEFTLYESR
LLDISVSPLMNCSVSQVICDVLFLIGQS
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgcccagaacgtctcagcctaccagtcccatggatcaaatggggaagatgcgaccccaa
ccctatggcgctacaaatccttacagccagcagccaggacctcagcaaggacactctggt
tatccagtgcagccttattcttcacaaactccacagagatatccaatggccatgcaaggt
cgacctcaaggggcaataggcatacagtacggacaacagatgtcttcatatggacagcag
ggcccagggccctattctcagcaaagccagtctccatactacaaccaacaagccctccac
cctccgcagcagcaaacgccaccacagtcccagtattctcagcagcaaccagctccccag
tcttacagccaacagacatcctctacccagcctccctccagccagcctgtgcagcccaac
ttcacccaacagcagcagtcaccatctccttcaccctacacacagcaacagcagcagggt
ccccctaccagttcacaaagccaatcaccatatacccaacaagctcctcagtatccaact
tcacaacagcaagggtcatcctattcagcatcaggggcacagcaggggagtacctattct
cagcaacgcttccctccaccacaggagctctctcaggattcctttacatcccaggcttca
tcaactccttctatgggttccagcaaagggcaagatgaacttagtatggggatgcagcca
cgaccttctagccttccggatctctctggttccattgatgatctccctatgggtgctgag
ggtgctcttagtcctggtgtcagcacttcaggaatttccagcagtcagggcgagcaaagt
aacccagcccagtctccgttttctcctcatacatcaccccaccttcctggtattagagga
ccttcaccctccccagtaggctctccagccagtgttgcaccatctcgatctggtccactc
tccccaacatctgttccaggaacacagatgcctccacgtcctcctagtgtacagtcagat
ggcttaattcaccctaccatgaaccaggctgcgcttgggcaagagagagggtacatgcag
aggaatgcacaaatacctcagtacggatccccacagcctggcccagcgctgtcgccacgc
cagtccacgggggcacagatgcatgctgggatgggaccctatcaacaaaactctatggga
agctatggacctcagggaagccagtatggtccccaaggagggtatccccgacagccaaat
tacaatgccatgcctaatgcaggatattctggaggtggtatggccccgcttgttacaggt
ggacagatacacgggcagggaggtatgccacagtatggaggacgcatggctcattctgca
atgggcaaccgcccatatgggccaaacatggggagcatgccaccgcaagtaggatctgga
atgtgccctccccctggtggtatgaatcgcaaagcacaagatactgcgggtatgcatggc
actgcaaattccatacaaagcaggtctccaggatatcccaacatgaaccagggtggcatg
atgggagcaggaccaccatatggccagggaataaatagtatggcggcaatgatgaataca
cagggacctccctatatgggaggcaatatggccaacaactcaggcatggctggcagccca
gagcttatgggactctctgatgttaaattgacgcaaactaccaaaatgaataacaaagca
gatgggacacctaaaaccgagaccaaatcaaagaaatccagttcctctactactacaaat
gaaaagataacaaaactgtatgaattgggagttgaaccagagagaaagatgtgggtggat
cgttacctttcattcacagaggagaaggcaatgagcatgaccaacctaccagctgtgggc
agaaaaccccttgatttgtaccgtctctacatgtctgtcaaagatattgggggacttacc
caggttaataagaacaagaagtggagagagcttgcaacaaacttaaatgtgggtacatcc
agtagcgcagctagctccctaaagaagcaatatatacaatgtctgtatgcttttgagtgc
aaaattgaaaggggagaagacccgccacctgatatcttttcttcagcagaagcaaagaaa
caggcgaaaattcaaccaccatctcccgctggctcaggctctatgcagggaccacagact
cctcagtccactagcagctctatggcagaaggaggggatctgaagcctccaacaccagca
tccacgccacatagtcagatgcctcccatgccaggcatgaggaataactcgggtctccag
gatgcatatgatggatcagatccttcttaccagaaaaggaactcaatgactcctaatcct
ggatatcagacagacatgatgggtagaatgccctatgagtctaacaaggacccctatggt
ggaatgagaaaaggagcagatcctttcatgtcgtctgggcagggacccagtggagcaatg
ggagatccatatagtcgagcacctggtcctgctatgtcaaacatggcgcagcgtcagcat
tatccttacagcagttatgacagagtgaggccagaaccaggtcttggtccagaagggaat
atggcaagtggagggacccaaccaaatatgatcccttccaccacagacagtggtatgtac
tctcctgggcgttacccacagcagagacatgactcctatagtaaccagtatcccacacag
ggtacatcatctggaagtccttatcctagtcagcagaatccaatgtatcagcaacagaac
tacaaaaggcccatggatggaagttatggaccatcttctaaacgccatgaaggagaaata
tacagtgctgcgtatgctggaccacagagtgtacaaggtcaaccacaggcacaacctcag
caacagacacctgggtctggagttccacctgctggacaaccctctccagctcctagctca
cagcagacacaggatccctatgggcaatatgggagcaattatccacaaagtgctggggag
cgcaggccaccaccttctgggcagaatcagtttccttttcagtttggtcgtgaaagagtg
cctgcagcaccaggcaacagtacgcagccgcctctgcctcctagtggaatggcagtatct
gcagaggcatcacaaccaggggccatgtggcaaggtcgaggtgagatgggttataactac
cagggaagacctggtccacctacatccagtacacaaggacctaactatcattctggacca
ccccgtggtgaagatattctgctttcagatcaacgacttagtcatgaaggtcagtggcaa
cctcacgtcaacagacagcagccaccttatgtgcctgcccctggcccaccgctaaccaga
ccaccaccacagtcaggttaccaggcctccccaagcatgcctaaccatctgcctcaggta
gcaagtccagccacccctcggcctctggaagcccacacttcacccagcaagtctcccttc
ctgaagatgcagaaagctggaccacctgtgcctgcatcccacattgtgcccacgcccaca
cagccaccactcatccgcagggacataactttccctcctggttccgtggaagccacccag
cccatactgaaaccaaggagaagactgactgcaaaagagattggtacacctgaggcttgg
cgtgtgatgatgtctttgaaatctggtctgcttgcagaaagtacttgggcactggacacc
attaatattcttctttatgatgacaacagcatcatgacatttaaccttagccagttgcct
ggattgctagagttgctagtggaatacttcagacgctgcctaattgagatctatgggatc
ctccgcgagtatgaagttggagagcctgggcaaaagaacctgcttagtccttcctctaga
aattctcaaagcccactcataagtgatgccgaatatagtgatggggatggcttccagtcc
cttgatgatgatctccaaagtgaggatgaagaggaaaggaaagcctactcagctccttgt
gtaggcaatgaggatacccagcggcatgtcagcaaatttgacaaactcccaatcaaagtt
gtacagcgggaagatgcctttgtgttggactgttctcacaggttgggtcgtcttcaagaa
tttgatagtggcctcttgcactggcgaataggagggggtgatacaacagaacacatccag
actcactttgaaaggcggcctgatccccctgtccgtaaacgctcccagggaaaacgcagg
tctcgagaacagcaagtaactggggcagaggacaccgctcctaccatagatgatgttctg
tgttccaggtcaagttctttgccatcagaagggggagagattcctaaagaggatacagaa
tttgcattaggtggcagtcccccatctcgcagcaggcacggtcttaaaattttggaggat
gaaccacgtagtaaagatgaaacccctttgtgcacactggaagattggcaagatgctctt
tcccgtcgttgcgtgtgcatatcgaacatcctgcgcagcttgtcttttgtgccaggcaat
gacttggaaatgtccaagcacccagggttgctgctgattcttgggaaactagtcttgctc
catcataagcacccagaaaggaaacaagcacctcttacttatgaaaaagaggaagagaga
gatcaaggagttagcagcaacaaggctgaatggtggtgggactgtttggaaatgttgcgt
gagaacacgctagtcactcttgccaacatctctggtcagctggacctttctccttaccct
gagagcatttgtctacccattcttgatggtctgctacactgggcagtttgtccatcagcg
gaagcgcaggatccatttgtaacattgggtcccaatgcagtactttcaccccagagactg
gtactggaagcactgagcaaactgagtattcaagacagcaatgtggacctaatattagct
acaccacctttcagtcgtcttgagaagctctatggaaccttggtgaggttcttaagtgac
agaaaaaaccacgtgtgcagggaaatggcagtggtgcttttggcaaacttggcacagggt
gatagtttagcagcaaggtctattgccctacaaaaaggcagcattggtaacctattaggt
tttcttgaagatagtctggcagccacccagtttcaacagagtcaggctgcacacttacat
ggaccctccgctccctttgagcctaccagtacggacatgatgagacgagcctcacgtgcc
ctgctggctttggccaaggttgaggaaaatcactcagagttcacgctgtacgagtcccgt
ctgctggacatctcggtgtctccactaatgaactgctcggtgtcacaggtcatctgcgat
gtcctctttttgattggtcagtcatga
DBGET
integrated database retrieval system
