Nanorana parkeri (Xizang Plateau frog): 108790909
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Entry
108790909 CDS
T04897
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
npr00536
]
108790909 (COL13A1)
Glycosaminoglycan binding proteins [BR:
npr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108790909 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
108790909
NCBI-ProteinID:
XP_018416770
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MEGKEVWKGAASHGSVFSRSCKNIPCRTENCGKCSRFPALLGCGFALVSVFSLLLSLLVL
CRTSDLQSRVSDLEKLRYTQLSALVSADQMETAILGRVDQLLEEKLKSHLPRLRETRDTS
VKCICPPGPPGTRGKRGQNGEPGPPGPGGRPGIPGDKGGLGMPGRMGLKGQLGEKGAPGE
PGMSVIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGQKGEKGDMGSPGPKGNTGTTGAK
GEKGLCADYSHRLLPAMINTVRAVQPAVVRKRIFQGEQGQTGTQGPPGLPGPPGPPGPVG
PSGDIGLPGNTGQPGKTGEPGKPGKDGKDGKGMPGPQGPKGESGTAGIPGRKGDLGEAGL
PGAPGLPGPVGGKGERGMPGMPGKHGAKGDPGVSGTKGEKGDTGNALGGVKGEPGTPGPS
GPPGPKGETGAVGQPGTQGQQGDKGSAGAKADQGPPGPRGPKGEPGKFNIVEYNSNLSEA
LQVIKESWDASLCPPGPPGPPGVPGQKGEIGLPGPPGHDGDKGPRGKPGEFGPPGPQGQD
GLQGPKGDTGSRGLQGPKGDKGDIGQTGSHGLDGPTGEKGDHGDQGVPGPPGLPGPIGLP
GLTGEKGDSGDKGESGNSVSGPPGLPGVPGPVGPPGIPGQKGEVGETGAKGEKGSQGEKG
DKGPLGLPGTPGPIGVPGPAGPKGERGNKGDPGVPGPTGPAGPPGLIGPSGEKGSRGERG
KKGSRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNKGQTPWLIAKK
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggaggggaaggaagtgtggaaaggtgctgctagccatggtagcgtcttctctaggagt
tgtaagaacatcccctgtaggacagagaactgtgggaagtgcagcaggttccctgcactc
ttgggatgtgggtttgcccttgtatcagtattttctctgcttcttagtcttctggttttg
tgtagaacttctgacctgcagtccagggtttctgatttagagaagctgcgatacactcag
ctatctgccttagtctctgcagaccaaatggagacagctattttgggaagagttgaccaa
ctgctggaagagaaactgaaatctcatctaccaagacttcgagagacaagagatacgagt
gtgaagtgcatatgtccacctgggcctcctggaacaaggggcaagagaggacaaaatggg
gagccaggaccacctggacctggtggacgccctggtattccgggtgataaaggtggtctc
ggaatgccaggacggatgggattaaaaggtcagcttggagagaagggcgctccaggagaa
ccgggcatgtctgtcataggaccccgtggccctcctggtcagcctggaacacgaggtttt
cctggatttcccggcccaataggattagacggcaagccaggccatccaggtcaaaaaggt
gaaaagggagatatgggttctcctggtccaaagggaaatacaggaacaacaggtgccaaa
ggagaaaagggtctctgtgcggattactctcacaggctgttgcctgctatgattaataca
gtgcgggcggttcagccagcagtcgtaagaaagcgcatcttccagggtgaacagggtcag
acaggaactcaaggtccaccagggctaccgggcccacctgggccacctggaccagtggga
ccttcaggagatataggattgccagggaatactggacaacctggaaaaacaggtgagcct
ggtaagcctgggaaagatggaaaagatggaaaaggtatgcctggacctcagggacccaag
ggagagtcggggactgcaggaatcccaggaaggaagggggacttaggtgaagctggcttg
cctggtgcacctgggcttcctggaccggtggggggaaagggagagagaggcatgcccggg
atgccagggaaacatggagcaaagggtgatccaggagtctcaggaacaaagggtgaaaag
ggtgacactggcaatgcacttggtggagttaaaggagaacctggtactccaggcccatca
ggacctccaggaccaaagggagaaactggtgctgttggccaacctggaactcagggtcaa
cagggtgataagggttctgcgggagctaaagcagatcaaggccctcctggaccaagaggt
cctaaaggggagccaggaaaattcaacattgtggaatataatagcaatctgagcgaggca
ttacaggtaataaaagaaagctgggacgctagtttatgtcctcccggtcctccagggcca
ccaggtgtaccaggacagaagggtgaaattggattgcctggtcctcctggccatgatggg
gacaagggccctcgagggaaacctggtgagtttggacctccaggtccccaaggacaggat
ggacttcaaggaccaaagggagatacgggatctagaggattacaagggccaaaaggagat
aaaggagatataggacaaacaggatcacatggtctcgatggccccactggagaaaaggga
gatcatggcgaccaaggagttccaggacccccaggtctacctggcccaattggacttcca
gggcttacaggagagaagggtgattctggagacaaaggagaatctgggaactctgtttct
gggcccccaggacttcctggtgttcctgggcctgtgggtccacctggaattcctggccaa
aagggtgaagtaggagagactggtgcaaaaggggagaagggaagtcagggagaaaaagga
gataaaggtcctttgggtttaccagggacccctggaccaataggagttccaggaccagca
ggaccaaaaggggagagaggcaataaaggagatcctggtgtaccgggaccaactggacca
gcagggccacctgggctgattggtccttctggtgagaagggaagccggggggaaaggggg
aagaaaggctctagggggcctaaaggggataagggagaccaaggagcgcctggattagat
gcaccctgcccgttgggagaagatggtttaccagtacaaggctgttggaataagggtcag
actccatggctaatagccaaaaagtga
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