KEGG   Nanorana parkeri (Xizang Plateau frog): 108790909
Entry
108790909         CDS       T04897                                 
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
  KO
K16617  collagen type XIII alpha
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:npr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:npr00536]
    108790909 (COL13A1)
Glycosaminoglycan binding proteins [BR:npr00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   108790909 (COL13A1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 108790909
NCBI-ProteinID: XP_018416770
LinkDB
Position
Unknown
AA seq 768 aa
MEGKEVWKGAASHGSVFSRSCKNIPCRTENCGKCSRFPALLGCGFALVSVFSLLLSLLVL
CRTSDLQSRVSDLEKLRYTQLSALVSADQMETAILGRVDQLLEEKLKSHLPRLRETRDTS
VKCICPPGPPGTRGKRGQNGEPGPPGPGGRPGIPGDKGGLGMPGRMGLKGQLGEKGAPGE
PGMSVIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGQKGEKGDMGSPGPKGNTGTTGAK
GEKGLCADYSHRLLPAMINTVRAVQPAVVRKRIFQGEQGQTGTQGPPGLPGPPGPPGPVG
PSGDIGLPGNTGQPGKTGEPGKPGKDGKDGKGMPGPQGPKGESGTAGIPGRKGDLGEAGL
PGAPGLPGPVGGKGERGMPGMPGKHGAKGDPGVSGTKGEKGDTGNALGGVKGEPGTPGPS
GPPGPKGETGAVGQPGTQGQQGDKGSAGAKADQGPPGPRGPKGEPGKFNIVEYNSNLSEA
LQVIKESWDASLCPPGPPGPPGVPGQKGEIGLPGPPGHDGDKGPRGKPGEFGPPGPQGQD
GLQGPKGDTGSRGLQGPKGDKGDIGQTGSHGLDGPTGEKGDHGDQGVPGPPGLPGPIGLP
GLTGEKGDSGDKGESGNSVSGPPGLPGVPGPVGPPGIPGQKGEVGETGAKGEKGSQGEKG
DKGPLGLPGTPGPIGVPGPAGPKGERGNKGDPGVPGPTGPAGPPGLIGPSGEKGSRGERG
KKGSRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNKGQTPWLIAKK
NT seq 2307 nt   +upstreamnt  +downstreamnt
atggaggggaaggaagtgtggaaaggtgctgctagccatggtagcgtcttctctaggagt
tgtaagaacatcccctgtaggacagagaactgtgggaagtgcagcaggttccctgcactc
ttgggatgtgggtttgcccttgtatcagtattttctctgcttcttagtcttctggttttg
tgtagaacttctgacctgcagtccagggtttctgatttagagaagctgcgatacactcag
ctatctgccttagtctctgcagaccaaatggagacagctattttgggaagagttgaccaa
ctgctggaagagaaactgaaatctcatctaccaagacttcgagagacaagagatacgagt
gtgaagtgcatatgtccacctgggcctcctggaacaaggggcaagagaggacaaaatggg
gagccaggaccacctggacctggtggacgccctggtattccgggtgataaaggtggtctc
ggaatgccaggacggatgggattaaaaggtcagcttggagagaagggcgctccaggagaa
ccgggcatgtctgtcataggaccccgtggccctcctggtcagcctggaacacgaggtttt
cctggatttcccggcccaataggattagacggcaagccaggccatccaggtcaaaaaggt
gaaaagggagatatgggttctcctggtccaaagggaaatacaggaacaacaggtgccaaa
ggagaaaagggtctctgtgcggattactctcacaggctgttgcctgctatgattaataca
gtgcgggcggttcagccagcagtcgtaagaaagcgcatcttccagggtgaacagggtcag
acaggaactcaaggtccaccagggctaccgggcccacctgggccacctggaccagtggga
ccttcaggagatataggattgccagggaatactggacaacctggaaaaacaggtgagcct
ggtaagcctgggaaagatggaaaagatggaaaaggtatgcctggacctcagggacccaag
ggagagtcggggactgcaggaatcccaggaaggaagggggacttaggtgaagctggcttg
cctggtgcacctgggcttcctggaccggtggggggaaagggagagagaggcatgcccggg
atgccagggaaacatggagcaaagggtgatccaggagtctcaggaacaaagggtgaaaag
ggtgacactggcaatgcacttggtggagttaaaggagaacctggtactccaggcccatca
ggacctccaggaccaaagggagaaactggtgctgttggccaacctggaactcagggtcaa
cagggtgataagggttctgcgggagctaaagcagatcaaggccctcctggaccaagaggt
cctaaaggggagccaggaaaattcaacattgtggaatataatagcaatctgagcgaggca
ttacaggtaataaaagaaagctgggacgctagtttatgtcctcccggtcctccagggcca
ccaggtgtaccaggacagaagggtgaaattggattgcctggtcctcctggccatgatggg
gacaagggccctcgagggaaacctggtgagtttggacctccaggtccccaaggacaggat
ggacttcaaggaccaaagggagatacgggatctagaggattacaagggccaaaaggagat
aaaggagatataggacaaacaggatcacatggtctcgatggccccactggagaaaaggga
gatcatggcgaccaaggagttccaggacccccaggtctacctggcccaattggacttcca
gggcttacaggagagaagggtgattctggagacaaaggagaatctgggaactctgtttct
gggcccccaggacttcctggtgttcctgggcctgtgggtccacctggaattcctggccaa
aagggtgaagtaggagagactggtgcaaaaggggagaagggaagtcagggagaaaaagga
gataaaggtcctttgggtttaccagggacccctggaccaataggagttccaggaccagca
ggaccaaaaggggagagaggcaataaaggagatcctggtgtaccgggaccaactggacca
gcagggccacctgggctgattggtccttctggtgagaagggaagccggggggaaaggggg
aagaaaggctctagggggcctaaaggggataagggagaccaaggagcgcctggattagat
gcaccctgcccgttgggagaagatggtttaccagtacaaggctgttggaataagggtcag
actccatggctaatagccaaaaagtga

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