KEGG   Nanorana parkeri (Xizang Plateau frog): 108793106
Entry
108793106         CDS       T04897                                 
Symbol
KDM4C
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:npr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:npr03036]
    108793106 (KDM4C)
Enzymes [BR:npr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     108793106 (KDM4C)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     108793106 (KDM4C)
Chromosome and associated proteins [BR:npr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108793106 (KDM4C)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_5 SLX1_C LBR_tudor
Other DBs
NCBI-GeneID: 108793106
NCBI-ProteinID: XP_018419562
LinkDB
Position
Unknown
AA seq 1079 aa
MAAKDSGEQNPACKIMTFRPTMEEFRDFNKYLVYMESKGAHRSGLAKVIPPKEWKPKKHY
DDIDDLVIPAPIQQMVTGQSGLFTQYNIQKKPMTVKEFRRMANSDKYCTPRYLDYEDLER
KYWKNLTFVAPIYGADVNGSLYDEDINEWKISRLNTILDVVEEECGISIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAQGFFPSSCQGCEAFLR
HKMTLISPSILKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFASVRWIDY
GKMAKLCSCSSDMVKISMDIFVKMFQPDRYDIWKQGKDIYTLDHTKPTMDTNPLLRTWMN
KRRRKIKNALKGIFHYSLQRTTSRSKRLKTREDKEVSTMVVGAEIVATEAATDGFKVNEK
PTENAEQINKEEPLGDVKNIREVHLDHSLLNNIQASGSPPAIPLEQDMKPEDEGNHDLSL
AASGLTELCTFFAPSADLKIEDGTNSVEEMDQKPPVQEIQTCEASEADRIEKEETSSITS
DEEDDASDLEIAECGLEPGEVASMLNDGKRGSEKPNLCNTTWAENNEKRPQRTKSWRLPL
GKPPSRSPMTVVKHQASDEEFSECAGETTEEADYWAKPLFHLWQTKVQNFAAEREFNESV
SKIKPYCAICTLFLPYYKSETYNDDVQTYWDTVSSEIPALEKKTKPLIPEMCFIYSEDNT
EYSPPNSFIDDDGRSQLITCTKCCVQVHASCYGVPSHEIHDGWMCSRCRIGVWTAECCLC
NLRGGALKQTTDDKWAHVMCAIAVPEVRFENVMERSQIDISRIPLERLKLKCVFCRQRVK
NAQGACIQCSYGRCPTSFHVTCAHAAGVVMEPDDWPFVVYITCFRHMINQNMRSKTTVKK
LSIGQIVIAKHRNTRYYSCKVAEITSQTFYEVEFDDGSISKDTFPEDIVSRDCLKLGPPA
EGEHVQVKWPDGLLYGAKYLGYNIVHMYRVEFEDGSQIVTKREDIYTLDEELPKKIKSRY
SRASDMKFEDAFYGEEVIRGERKRQRVLNVKFKNEYVDDPGYRTFLKSSFQKKCHKGQY
NT seq 3240 nt   +upstreamnt  +downstreamnt
atggctgcaaaagactcaggggagcagaatcctgcttgcaaaattatgactttccgaccc
actatggaagaattccgagatttcaacaaatatctggtatacatggagtctaaaggtgct
caccgatctgggttggcaaaggtgataccaccaaaggaatggaaacccaagaagcattat
gacgacatagatgatcttgtcattcctgctccaatccagcagatggtcactggccagtca
ggcctcttcactcagtataatatccagaagaaaccaatgactgtaaaagagttccgaaga
atggcaaatagtgacaagtactgcaccccaagatacttagactatgaagatctggaacgt
aaatactggaaaaatttaacttttgtggcgccaatttatggagcagatgtcaatggaagc
ctgtatgatgaagatataaatgaatggaaaatttcccgcttaaataccatcttggatgtt
gtagaagaggaatgtggcatctctattgaaggtgtaaatactccttatctctactttggc
atgtggaaaaccacatttgcatggcatacggaagatatggatctttacagcattaactac
ctccactttggggagccaaaatcatggtattccataccaccagaacatgggaaaagactg
gaaagactggctcaaggttttttccccagcagctgtcaaggatgtgaagcatttcttcgg
cataaaatgacactcatatcgccatcaatactaaagaaatatggaattccttttgacaag
gttacacaagaagctggtgaatttatgatcactttcccatatgggtatcatgccggtttc
aatcatggcttcaactgtgccgaatcaacaaattttgcttcagtcagatggattgattac
ggaaaaatggccaagctgtgttcatgcagtagtgacatggtaaaaatatcaatggatatc
ttcgtgaagatgtttcagccagaccggtatgacatctggaaacaagggaaggacatctac
actcttgaccacacaaagcctacaatggatactaatccattactaaggacctggatgaat
aaaaggagaaggaaaataaagaatgctttgaaaggtatcttccattacagccttcagcgt
accacatctcgttctaagaggcttaaaactcgggaggacaaggaagtatcaaccatggta
gtcggggcagaaatcgtagctactgaagctgctacagatggtttcaaggtcaatgaaaaa
cccacagaaaatgcagagcaaataaacaaagaggagcctttgggggatgtgaagaacatt
agagaagtgcatctagatcacagcttattgaataatatccaagcctcaggttcacctcct
gctattcctttggaacaagatatgaagccagaagacgagggtaatcatgacctcagtttg
gctgcttcaggccttacagaactatgcaccttttttgccccatctgctgatttaaagata
gaagatggcacaaattcagtagaggaaatggaccaaaaaccacctgtgcaagaaatccaa
acatgtgaagcttctgaagctgatcgcatcgaaaaggaggagacgagcagcatcaccagt
gatgaagaggatgatgccagtgaccttgagatagctgaatgtggcctggaacctggagaa
gttgcttccatgttaaatgatgggaaacggggctccgaaaagcctaatctatgtaacaca
acttgggctgaaaataatgagaaaaggccacaaagaacaaagagctggcgacttcccctg
ggtaaacctccttctagatctcctatgacagtagttaaacatcaagcaagtgatgaagaa
ttttcagaatgtgctggcgaaacaactgaagaagctgattattgggctaaacctcttttt
catctctggcaaaccaaggtgcaaaattttgcagctgaaagagagtttaatgagtctgtc
tccaaaatcaagccatactgtgctatctgcactctctttttgccttactacaagtcagag
acctataatgatgatgttcagacttattgggacacagtttcaagtgaaattcctgcattg
gagaaaaaaacgaagcccttgatcccagaaatgtgcttcatatacagtgaagacaacaca
gaatattctccaccaaattcctttattgatgatgatggcagaagtcagcttattacctgc
acaaagtgttgcgtacaggttcatgcgagttgttatggtgttccttcccatgaaattcat
gatggatggatgtgttctcgatgtagaattggagtttggacagcagaatgctgcctttgc
aatttaagaggaggggcactaaagcaaactactgatgataagtgggcgcatgtaatgtgt
gcgattgctgtgccagaagtaaggtttgaaaatgtgatggagagatcacagatagacata
agcagaattcctcttgaaaggttaaaattgaaatgtgttttctgcagacaaagggttaag
aatgctcaaggagcttgcatccagtgctcatatggccgctgtcccacatccttccacgtc
acctgcgcccatgctgcgggggtagtgatggaacccgatgactggccctttgtagtgtac
atcacatgcttcaggcacatgatcaatcagaacatgaggagcaaaacaacagtgaagaag
ctaagcattggacagattgtcattgcaaaacacaggaacacaagatactacagttgcaag
gttgctgagatcacttctcagacattctatgaagttgaatttgatgatggctctattagt
aaagatacattccctgaagatatagttagcagagactgccttaaattagggccacctgca
gaaggagagcatgtgcaagtgaaatggcccgatggcttactttatggagcaaaatatctt
ggatacaacatagtgcatatgtaccgggttgaatttgaagatggttcacagattgttaca
aaaagagaagatatttacacattggatgaagagcttcctaaaaagattaagtctcgctat
tccagagcatcagatatgaaatttgaagatgctttttatggggaagaagtcattcgtggt
gagaggaaaaggcagagagttctcaatgtgaagttcaagaacgaatatgtcgatgaccca
ggatatcgtacatttctcaagagttcattccaaaaaaaatgccacaagggtcaatattag

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