Nanorana parkeri (Xizang Plateau frog): 108794657
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Entry
108794657 CDS
T04897
Symbol
SLIT1
Name
(RefSeq) slit homolog 1 protein isoform X1
KO
K06838
slit 1
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
npr00536
]
108794657 (SLIT1)
Glycosaminoglycan binding proteins [BR:
npr00536
]
Heparan sulfate / Heparin
Axon guidance molecules
108794657 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRRNT
hEGF
LRRCT
LRR_9
LRR_1
EGF_3
DL-JAG_EGF-like
JAG1-like_EGF2
C8A_B_C6_EGF-like
EGF_2
Motif
Other DBs
NCBI-GeneID:
108794657
NCBI-ProteinID:
XP_018421236
LinkDB
All DBs
Position
Unknown
AA seq
1524 aa
AA seq
DB search
MAMRGYPTFPLWLRVGVWILAWSSLCQVFANGCPALCTCSGTTVDCHGLGLKMVPKNIPR
STERLELNGNNITRITKNDFSGLKQLRVLQLMENQIINVERGAFDDMKELERLRLNRNQL
HTLPELLFQNNQALSRLDLSENVIQAIPRKTFRGATELKNLQLDKNQISCIEDGAFRALR
GLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNNLFCDCHLAWLSQWLRQRPTIGLFTQ
CTGPLPLRGLNVAEVQKHEFACSGQTDPSSTQICSLSIGSCPAMCTCSNGIVDCRGKGLT
AIPANLPETMTEIRLEQNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPDAFHGLRSLNS
LILYGNKITDLPKGVFSGLHALQLLLLNANKINCIRADTFQDLQNLSLLSLYDNKIQSLA
KGTFSSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIK
SKKFRCSGTEDYQLNSECNSDVVCPPKCRCESNVVDCSNLRLTKIPDRIPQSTAELRLNN
NEISALEATGLFKKLPHLKKINLSNNKITEIEDGGFEGATSVSELHLTANHLESVRSAMF
RGLEGLRTLMLRNNRVSCVHNDSFTGLRNVRLLSLYDNQISTITPGAFDTLQSLSTLNLL
ANPFNCNCQLAWLGDWLRRRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCEEGQEELSCA
PQPLCPQECTCLDTVVRCSNKHLLSLPKGIPKNVTELYLDGNQFTMVPAQLSTFKFLQLV
DLSNNKISSLCNSSFTNMSQLTTLILSYNSLRCIPPLAFEGLRSLRLLSVHGNDISSLPE
GIFSDVTSLSHLAIGANPLYCDCNLRWLSNWVKTGYKEPGIARCTGPAEMDGKLLLTTPA
KKFECTGPPSLSIQAKCHPCLSSPCRNQGICQNDPVEYYKCICPPGFKGKNCEISLNACS
SNPCENQGVCHPKDNASGFTCSCPDGFEGPTCAVNRDECKYSDCDNGATCVDGINTYTCL
CPAQYTGEYCEQLVDFCSAELNPCHPNSKCVTTAEGPKCECAPGYGGENCSLNHDDCQDH
RCQNNAKCVDEVNGYSCQCTEGYSGQLCEMPSQSSTLTNPCKLADCQNGANCIDLGNSAV
CQCLPGFGGTRCEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTDEDNGILLYNGDRD
HMAVELYQGHVRVSYDPGSFPSSAIYSAETINDGQFHTVELVTFDQMVNLSIDGGAPMTM
DNFGKHYTLNSETPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYINNELQDFTKTQ
MKPGVVPGCEPCKKLYCLHGICLPNAANGPVCHCETGWMGPHCDQQISNACMGHKCVHGT
CMPLDALTYSCVCQEGYKGALCNQQAELYNPCKNLQCQHGRCQISDVGEAYCECDSGYVG
DVCDQESECRGEPVRDYYQVQRGYAICQTTRVVSWVECRGSCHNQGCCTGLSIKRRKYTF
ECSDGSSFVEDVEKPIKCGCSRCM
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atggctatgagaggatatcctaccttcccattgtggctcagagtcggagtatggatcctg
gcatggagcagcctctgccaagtgtttgccaacggatgcccggcgttgtgtacctgtagt
ggaaccacagtggattgccatggattggggcttaaaatggtaccaaaaaacatccccagg
agcacagaaagactagaactgaatggtaacaatatcacacgtatcacaaagaacgacttc
tctggcctcaagcagctgcgagtcttgcagctgatggagaatcagattatcaacgtggag
cgtggagcttttgatgacatgaaggaactggagaggctacgcctcaaccgaaaccagcta
cacacactgcctgaacttctgttccagaacaaccaagcactctccaggcttgaccttagt
gaaaatgttatccaggcgattccaaggaaaaccttcagaggagctaccgaacttaaaaac
ttacaactggataaaaatcagatcagttgtattgaagatggagctttccgagcccttcga
ggattggaggtcttaaccctcaataacaacaacatcaccacaatccctgtctccagtttc
aaccatatgcccaaactgaggacattccgcctgcattccaacaacttgttttgtgactgt
cacttggcctggctatctcagtggctccgccagcggccaaccattggattattcacacag
tgtaccgggcctcttcccctccgaggactgaacgtggcagaagtccagaagcatgagttt
gcctgttcaggccagacagatccatctagcactcagatctgcagcctctccattggctcc
tgtccagcgatgtgtacctgcagtaatggtattgttgattgcagaggaaaaggtcttaca
gcgataccagcaaacctgccggaaactatgactgaaatacgcttggagcagaatggaatc
aagtctgtacctcctggggctttctctccatataagaaactgcgcaggatagacctcagc
aacaaccagatctcggagattgcccccgatgctttccacggcctccgctcacttaattcc
ctgattttgtatggcaacaaaattacagatcttcccaaaggtgtgtttagcggccttcat
gcattgcagcttctacttctaaatgccaacaaaattaactgcatccgggctgacaccttc
caggacctgcagaacctctctctgctgtcactgtatgacaacaagattcagagcttagcc
aaaggaaccttctcttctctccgtgccatccagaccttgcatttagctcaaaaccctttc
atctgtgactgtaacctgaagtggctggcagactttctgagaacaaatcctatagagacg
agcggggcccggtgtgccagccctcgccgacttgccaacaaacgcattgggcaaattaaa
agcaaaaagttcagatgttcaggaacagaggactatcagctgaacagcgagtgcaacagc
gatgttgtctgtcctcccaagtgcagatgtgaatcaaatgtggtggattgttccaacctg
aggctcaccaaaatcccagaccgcatccctcagtctacagccgagctgcgtctgaacaat
aatgagatctcagctctggaagctactggtctcttcaagaaacttccgcacctcaagaag
atcaacttgagcaacaacaagatcacagagattgaggatggaggatttgaaggggcaaca
tcagtgagcgagttacacctgacagctaatcacctggagtcagtgcgtagtgccatgttc
cgtggtctggaagggctgaggacactgatgctcagaaataacagggtcagctgtgtgcac
aatgacagcttcaccggcctcaggaacgtccgcctcttgtccctgtatgacaatcagatc
agcacaatcactcctggagcctttgacacactgcagtccctctctacactaaacttgctg
gccaatcctttcaactgcaactgccagctggcctggcttggggattggctgaggagaagg
aagatagtaacaggaaaccctcgctgccagaacccagacttcctgcgccaaataccactg
caagatgtggccttccctgacttcagatgtgaagaaggtcaggaggagctgagctgtgct
ccacagcctctgtgtcctcaggaatgcacctgtctggatacagtcgtacgttgcagcaac
aaacacctattgtcactgccaaaaggtatccccaagaacgtcactgaactatacctggat
ggtaatcagttcacaatggtgcctgcccaactatctacattcaaatttttacagctggta
gacctgagcaataacaaaatcagctccctctgcaattcatccttcacgaacatgagtcag
ctcaccacattgattctgagttacaattctctgcgctgtattcctcctctggcatttgag
ggactgcgatccctgaggcttctatctgtccacgggaatgacatctccagcctgccagaa
ggcatcttttctgatgtcacctccctgtctcacctagcgattggagccaaccctctgtac
tgcgactgcaacctgcgctggctgtcaaactgggtgaagactggctataaggagcccggc
atcgcccgctgtacaggacccgcagaaatggatggaaagctgcttctcactacaccagcc
aagaagtttgaatgcacagggccaccaagcctcagtatccaggccaagtgtcacccctgt
ctgtccagtccttgtcggaaccaaggaatctgtcagaatgaccctgtggaatactacaaa
tgtatctgtccgcctggcttcaagggtaaaaactgtgagatctccctaaatgcgtgttct
agcaacccatgtgaaaatcagggcgtttgtcaccccaaagataacgctagcggattcaca
tgttcctgtcctgatgggtttgaaggccccacatgtgcagtaaacagagatgaatgcaag
tacagtgactgtgataatggcgccacttgtgtggatggaataaacacctatacttgcctg
tgtccagcacagtacacaggggaatactgtgaacagttggtggacttttgttctgcagag
ctcaatccatgtcatcccaattccaaatgcgtcacgactgcagaaggtccaaaatgtgaa
tgtgcaccaggctatggaggggaaaactgcagcctcaatcatgacgactgccaggaccac
cgctgccagaacaatgccaagtgtgtggatgaggtgaacggctactcctgtcagtgcaca
gagggatacagcggtcagctctgtgaaatgccatcgcaatcctccactttgaccaatcca
tgtaagttagcagactgccagaatggagccaactgcattgacctgggtaacagtgctgtg
tgtcagtgtcttcctgggtttggcggaacccggtgtgaaaagctgttgagtgtaaacttt
gtggacagagacacatatctgcaattcacagacctccagaactggccgcgggcaaatatc
acacttcaggtatccacagatgaagacaatggaattctgctgtacaatggagaccgcgac
cacatggcagtagaattatatcaaggtcatgttagagtgagctatgaccccggcagtttc
cccagctctgccatctacagtgcagagacgatcaacgatggccagttccacactgtagag
ctagttacctttgaccagatggtgaatctgtctatagacggtggggcgcccatgacaatg
gacaattttgggaaacactataccctcaatagtgaaactccgctgtatgtaggaggaatg
ccagtagatgtcaactccgctgctttccgactctggcagattcttaatggcaccagcttt
catggctgcatccgcaacctctatataaataatgagctccaggacttcaccaagactcag
atgaagcctggggtagttccgggatgtgaaccatgcaaaaaactctactgcctccatggt
atttgtctacctaatgctgccaatgggcccgtgtgccattgtgagacaggctggatgggc
ccacactgtgaccagcagatcagtaatgcttgcatgggacataagtgtgtacatgggact
tgtatgcccctggatgctctgacatacagctgtgtgtgccaggaaggctacaaaggtgct
ctgtgcaaccagcaagcagaactctataatccctgcaagaaccttcaatgccagcatggg
cgatgccagatctctgatgtgggggaagcctactgcgaatgtgacagtggctacgtaggc
gacgtctgtgatcaagagtcagagtgtagaggggagcctgtccgcgattactaccaggtg
cagaggggatacgccatttgccaaaccacccgcgtggtgtcctgggtggagtgccggggc
tcgtgccacaaccagggctgctgcacggggttaagcattaagcgcaggaagtacacgttc
gagtgcagcgacggatcctcttttgtggaagacgtggagaagccaatcaaatgcggctgt
tctcggtgtatgtag
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integrated database retrieval system
