Nanorana parkeri (Xizang Plateau frog): 108794811
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Entry
108794811 CDS
T04897
Symbol
NCAN
Name
(RefSeq) neurocan core protein
KO
K06794
neurocan core protein
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
npr00535
]
108794811 (NCAN)
00536 Glycosaminoglycan binding proteins [BR:
npr00536
]
108794811 (NCAN)
04091 Lectins [BR:
npr04091
]
108794811 (NCAN)
Proteoglycans [BR:
npr00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
108794811 (NCAN)
Glycosaminoglycan binding proteins [BR:
npr00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
108794811 (NCAN)
Lectins [BR:
npr04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
108794811 (NCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
V-set
Sushi
hEGF
Ig_3
C8A_B_C6_EGF-like
EGF_CA
I-set
EGF_2
Motif
Other DBs
NCBI-GeneID:
108794811
NCBI-ProteinID:
XP_018421418
LinkDB
All DBs
Position
Unknown
AA seq
1863 aa
AA seq
DB search
MGSSWCSRTALDVSPKTPLWNNPNLPHFYTVPDPAFWAKRGVKFLSDIVESTSLISFDDL
AARNAIPPKFIFRYLQLAHAFSAQFPGDRFRLGESQLESLAGTVGLMKPASSFYTTLQTL
NSSSLLTLQNKWRMDVPDMDEEDWEEVLLGGGLYLKGHLIATDTIAENVPPGPGEGCSSD
QVGTHVGRPDLVLCSIIILGIWLFLIHSRSTNTADADENVKPLHIQRHQHGLVQCGLAQS
VALPCLFVVRPSQTPQAFNVTSESPRIKWSKLQPDKGQKEIAVLVARENVVKVARGYEGR
VSLPAYPHNRYNATLVLSNARASDSGMYRCEIVLGIEDEQDAVPLEVTGLVFHYRAASNR
YALTFPDAVRSCKENSGIIASPEQLQAAFEDGLDNCDAGWLSDRTVRYPIKAPRPGCYGD
RNNLPGVRTYGERDPQETYDAYCYTEEPQGDVYYVPERNNLEGARKSCLRDGATLATVGQ
LYAAWRKGLDQCDPGWLADSSVRYPIRNPRKNCGGEEPGVRTLYQHPNRTGFPSPKRRFG
AYCYKALQATAPTSQGNEQQGPAFMPQEDLRLIKPELQSQEPGQATQLEFNNALSATDSV
ISTTRHGYEKGGSDPVTSIDLKGISSEVNVLSSKLLNPDFTEEVQQEAVTSDPPESDYVH
SSRLLTTTHASIGNRIQGTIGTQDTKVTPVTVRWKISKHEVSKGQKEDWSLNMVDRTSKP
RQTSWREIVEQVEPDSSEEVSNAGRVPKQQGVSKDISSVPEDGQNSLQYMWLLGKHNSLS
AKTDGPGHISDTKLLYEHFEFSTPTTELENEKQSPTENKETSLLEASHQSTLASFDNPTG
QPDKIGQRHFENTLGKYETSLHRDIVWEPDRPDNHMQSNNELTTIGNWDNDHILHAESLS
SSIEVKDTEKLQPKLKISQSTQSAGSLFRDGVIRKELALRMCQGLGSSYHTLQYCQPEKC
KYCIQSGARTDNLIVNLQNAIRFSIRQPLAAITENMRAQPHDAISQRLAENLQTKLRGTG
LTGLKRHEKAEHLPMMPSYQDASVTAVVENQPTMQSPTEEPHEKKIVEQYAMTLNRSQDL
LDHWLPTVTEPHAGHHSFTETTPANVTEFPLHIIKDSKVPKSWISAGDKHKEPINGDSSE
VLSARGHKAIEGEDVEGFSGDLIVKNGRHLSLETPNPIDSAVTTQGSDHFLFPVTKLSDT
VWGTFETGENLYTNFQERQGKEKTFSEKLALSFQKNKTDEAHNSTDLRLSATNIPETIFG
HKNSDLLNALPKSNDDIYHKNVKAEAIQKTTLSPYLTTSNQKGSIGWQQDVSSHTTEAPE
TVLTETENQTTTVIHHETVTQNLGFESKTISIQSIKDTFYEAQHVTSEGGRKNTTADEST
ESVPESEHISVTNSFTTDSILATEDRVTVAHGTPRPHYNFISRSPLTSMDNLKKEMANRD
MGAITPSPSLIYRADHHDDMQGFSDQSSYESTIASDNTFIFGPTADSEMEETLSLEKEED
LGSGREEDSTQWLIEGHSAQGEPQPCVHSPCLHMGTCQSNGSTYSCICHKGYTGENCEID
IDECLSNPCQNGGTCIDEIDSFLCLCLPSYGGSTCGKDTEGCDHSWHKFQGSCYRYFPQR
RPWEEAERDCRRRSGHLTSIHSPEEQAFIKSFGRENTWIGLNDRTVEQDFQWTDNTALQY
ESWRDQQPDNFFSGGEDCVVMVSHEEGKWNDVPCNYNLPYICKKGTVLCGSPPAVRNALI
IGKKKEKYSIHSTIRYQCQDGFIQRHIPTIRCHRNGRWDRPRILCVKPRRHHRTRRHRQH
WHHPHKQQTHDTNHQHRHHHNNNHHHHHHNHHHKNQHHNQHKSHRERRKEDRHTHRRDKD
TYY
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atgggaagttcctggtgctccaggacggccctggatgtttccccaaaaacacctttgtgg
aataaccccaacttgccccacttctacacggtccctgatcccgctttttgggcaaaacga
ggtgtgaaattcctctcggatattgtggagtccacttccctgatctcatttgacgaccta
gccgcgaggaatgctataccccccaaatttatttttcgctacctacaactcgcccatgcc
ttcagcgctcaattcccaggggataggtttcgcctgggagaatctcaattggagtccctg
gctgggacggtgggactgatgaagcctgcctccagtttctatactaccctacagaccctg
aattcctccagcctgctcacattacagaataagtggagaatggacgtccctgacatggac
gaggaagactgggaggaggtcctactgggaggtggactatatctcaagggtcacctcatt
gccactgacaccatcgccgagaatgtgcctcctgggcctggtgaaggatgtagctccgac
caggtcggaacgcatgttggtaggcctgaccttgttctatgctcgataattatattgggg
atttggctcttcctgattcacagtagaagcacaaatactgcagatgctgacgagaatgta
aagcctctgcatatccagagacatcaacatggccttgtgcaatgtggactggcccagtct
gtggccctcccttgcctttttgtcgtacgcccctcccaaaccccacaggctttcaatgtt
acctcagaatcaccacgcattaaatggagcaaacttcagcccgataaaggacagaaggaa
atagctgtcttggtggcccgtgagaatgtggtaaaagtcgctcgtggttacgagggaaga
gtatctctgcctgcatacccccacaaccgctacaatgccacactggttttgtccaatgct
cgtgccagtgactcagggatgtaccgctgtgagattgttttgggcattgaagatgagcaa
gacgctgtgccactggaagtcactggtctggtctttcattaccgagcagcaagcaatcgt
tacgcgctgactttccctgatgctgtgcgatcctgtaaggagaactctggtatcattgca
tctccagagcagctgcaggctgcgtttgaggatggcttggacaactgtgatgcaggatgg
ctgtctgatcgaactgtcaggtatccaataaaagctcccaggcctggttgctatggggac
agaaataacctgcccggtgttaggacgtatggagaaagggatccacaagaaacctatgat
gcatattgttacactgaagagccacaaggagatgtttattatgttcctgaacgaaacaat
ctggaaggcgccaggaaatcttgtctacgtgatggagcaacattggccacagtggggcag
ctgtatgcagcatggagaaagggtttagaccagtgtgacccaggttggctagcagacagc
agtgtccgttaccctattcggaacccaagaaaaaactgcggtggtgaagaaccaggagtt
cggactttatatcaacatccaaaccgcacaggtttccctagtcctaaaaggaggtttgga
gcatactgctacaaagctcttcaagcaacagcccccacctcacaagggaatgagcagcaa
ggtccagcgttcatgccacaggaagacctcaggctgataaaaccagaacttcaaagtcaa
gagcctggacaagcaacacaattggaatttaataatgccttgtctgccactgacagtgta
atatctactacaaggcatgggtatgaaaaaggaggcagtgatccagtaacatcaatagat
ttaaagggaatttcaagtgaagtcaatgtgttatcttcaaagctgcttaatccagatttc
actgaagaagtgcaacaagaagcagtgaccagtgatccaccagaatcagattatgttcac
agttcaaggctgctaactactacacatgcctctattgggaataggatacaaggtacaata
ggaactcaagatacaaaggtgactccagttacagtcagatggaaaattagcaaacatgag
gtttccaagggacagaaagaggactggtcattgaacatggtggacaggacatcaaaaccg
agacagacgagttggagggagattgtagagcaggtggaaccagattcttccgaagaagtt
tcaaatgctggccgagtaccaaaacagcagggcgttagcaaagatataagttcagttcca
gaggatggccaaaattcattgcagtacatgtggcttttaggtaaacataattctctatct
gctaagaccgatggacctggtcacatttctgataccaaattactttatgaacactttgaa
ttttccacccccacaacagagttggaaaatgaaaagcaaagccctacagaaaacaaagaa
actagtttactagaagccagccatcaaagcacgttggcttcgtttgacaatccaactgga
caacctgacaaaattggacagcggcattttgaaaacacacttggcaaatatgaaacaagt
ttgcatagggatattgtatgggagcctgatagacctgataaccatatgcaaagtaacaat
gaattgacaactataggaaactgggataatgaccatatacttcacgctgaatctttgtcc
agttccattgaagtgaaggatacagagaaattgcaaccaaagctcaagatatcacaaagc
acgcaaagtgcaggatccttgttcagggatggagtgataaggaaagagcttgccttgaga
atgtgtcaagggctgggaagcagttatcacaccctgcaatactgccagccagaaaaatgc
aaatattgcatccaatctggagcacgaacggacaatctgattgtaaatctgcaaaatgca
atcagattttccatccgtcagccacttgctgcaatcacagaaaacatgagggcgcagcca
catgatgcaatttcccagagattagcagaaaacttacaaaccaagctcagaggcacagga
ctgactggtttgaaaagacatgaaaaagcagaacacctaccaatgatgccatcatatcaa
gatgccagtgttacagcagtagttgaaaaccagccaacaatgcagtcaccaacagaagag
cctcatgaaaagaagatagtagaacaatatgctatgacattaaatagaagccaagattta
ttggaccactggcttcctacagttacggagcctcatgcaggacaccattcgttcactgaa
acaactcctgcaaatgtcactgaatttcctttacacattatcaaagactcaaaagtaccc
aaaagttggattagtgcaggtgacaagcataaggagccaattaatggagatagctcagaa
gtactgtcagctagaggacataaggccatagagggagaagatgttgaggggttttcaggg
gatcttatagtaaaaaatggtagacatttatcattagaaactcccaatcccattgattca
gccgtaacaacacaaggttctgatcattttttattcccagtaacaaaactttcagacaca
gtatggggaacttttgaaacgggagaaaacctatatactaatttccaagaacggcaaggc
aaagaaaaaacattttcagagaagctagcattatcttttcaaaagaataaaacagatgaa
gcgcataactccactgacttgaggctgtcagcaacaaacattcctgaaactatctttggg
cacaagaattctgatttattaaatgcacttccaaaatcaaatgatgacatctaccacaaa
aatgtcaaagcagaagcaatacagaaaacaactttgtcgccatatcttacaactagcaac
cagaaaggatccattgggtggcaacaggatgtatcttcacatactacagaagcccctgaa
actgtacttactgaaacagagaaccaaactacaactgttatccaccatgaaactgtcact
cagaatctaggctttgagagtaaaaccatctcaatacagagcataaaagatacattttat
gaagcccagcatgtaactagtgaaggtggtagaaagaacacaacagctgatgaaagcact
gagtcagttccagaaagtgaacacatttctgtaaccaactcatttacaacagactcaatc
ttggcgacagaagacagggtaacagttgcccatggaacaccaagacctcattacaatttt
atctcaaggtcacctttaacatccatggacaacctgaaaaaagaaatggcaaatagggat
atgggagcaatcacaccaagcccatctctcatttatagagcagaccaccatgatgatatg
caggggttttctgatcaatcttcttatgagtctactattgcatctgacaacacttttatc
tttgggcctacagcagatagtgagatggaagaaacattatctctggagaaggaagaagat
ctaggaagtggtagagaagaagacagtacgcagtggcttattgaaggtcatagtgcacaa
ggggaacctcagccttgtgtccacagcccttgcttgcatatggggacctgtcagtctaat
ggaagcacatacagctgcatctgccacaaaggctatacaggagaaaactgtgaaattgat
attgatgaatgtttatctaacccctgccagaacggaggaacgtgcattgatgaaatagac
tcattcctgtgtttgtgtttaccaagctacggcggaagcacatgtggcaaagatacagaa
ggctgcgatcatagctggcacaaatttcaaggatcttgttacagatactttccccagcgg
aggccgtgggaggaagcagaaagagactgccggaggagatctggccacctcaccagtatc
cactctcctgaggaacaagcttttatcaagagttttggtcgtgagaacacctggattggt
ctcaatgacagaacagtagaacaggacttccaatggacagataatacagcactgcaatat
gagagctggcgtgatcagcagccagataactttttttctggtggagaagactgtgtagtt
atggtttcacatgaagagggcaagtggaatgacgtaccatgcaactacaacttaccttac
atctgcaagaaaggaactgtcctttgtggctcaccacctgctgtgagaaatgctctcatt
attggcaagaaaaaagaaaaatatagcatccattctacaatacgttaccagtgccaggat
ggttttatacaacgtcacattccaaccatcagatgtcaccggaacggaagatgggacagg
cctcgtatcctatgcgtaaaacctagaagacatcacaggacaaggagacatcgtcagcac
tggcatcacccacacaaacaacaaactcatgacacaaatcaccaacaccgccaccaccat
aacaataatcatcatcatcaccaccacaaccatcaccacaagaaccaacatcacaaccag
cacaaatcccaccgtgagagaagaaaagaagatcggcacacacacaggagagataaggac
acttactactaa
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integrated database retrieval system
