Nanorana parkeri (Xizang Plateau frog): 108795003
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Entry
108795003 CDS
T04897
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04140
Autophagy - animal
npr04148
Efferocytosis
npr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108795003 (VPS11)
04148 Efferocytosis
108795003 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108795003 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npr04131
]
108795003 (VPS11)
Membrane trafficking [BR:
npr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108795003 (VPS11)
Hops complex
108795003 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
PH_20
zf-C3H2C3
zf-RING_5
zf-RING_UBOX
GHL13
DLP_helical
TPR_11
zf-ANAPC11
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
108795003
NCBI-ProteinID:
XP_018421670
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MAVYLQWRKFVFFEKESVRFPGDGGKALSLPPGLIVCDSGRGSLVFGDMTGQIWFLSRSL
QLTSFQAYKLRVTHLHQLKQHNILVSVGEDEEGTNPLVKVWNLEKRDGGNPLCTRIFPAI
PGNKPTVVSCITVHENINFMPLGFADGSVVLTKGDITRDRHSKTQILQEGSFPVTGMAFR
QTGKTTHLFVVTTEYVKAYELTLKDYPFIELDSHGCGLRCSALSDPSQDMQFVVAGNECI
YLYQPDERGPCFAFEGQKLIVHWYRGYLIIVTKERSDFAVRSGDSHAPDRQTLTIYDLGN
KLIAYSCTLTEVVDVLAEWGSLYVLTRDGFLHAFHEKDTQTKLEMLFKKNLYVMAISLAK
SQHLDSDGLSEIFRQYGDHLYSKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTA
YLQALHLQSLANADHTTLLLNCYTKLKDSAHLEEFIKGSVDEVHFDVEIAIKVLRQAGYH
SHALYLAEKHAHHEWYLKIQLEDIKNFQEALRYIGRLPFPQIESNMKCYGKILMYHVPNE
TTQLLKDLCTNFAQNEGREKANPEEFIPIFANNPCELKDFLEHMIQVLSDSPQGVYDTLL
ELRLQNWAHEKEPQARQQLQNDVMTLLKSGHFKNVFDKALVLCQMHNFQKGVLYLYEQGK
LFQQIMHYHMQNNQYQEVIEACKQYGEQESCLWEQALGYFARKEEDCKEHIATVLKHIER
KNLMPPLLVVQTLAHNSTATLSVIRDYLINKMQKLSQQTEDDERTVKKYREETARIRREI
HELRNSPKTFQKTKCSICSSALELPSVHFLCGHSFHQHCFESYAESDSDCPTCLPENRQV
LDMIRAQEEKKDLYEHFQHQLKCSSDGFSVVAEYFGRGVFNKLTLITDVPAEKSRITKDV
GLQRDLLINTRRNV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtacctgcagtggcggaaattcgtgttttttgagaaggagtcggtgcggttc
cccggggatggcggaaaggcgctttccctgccgcctggactgatagtatgcgactccggc
cggggcagtctggtgtttggggatatgaccggacagatctggttcttgtcccggtccctt
cagctcacctccttccaggcatacaaacttcgtgttacccatcttcatcagctgaaacaa
cacaacatccttgtctctgtcggggaggatgaggaaggcacaaaccctctggtgaaagtc
tggaacttagaaaaacgtgatgggggcaaccccctttgcactagaattttcccagccatt
cctggtaataaacccaccgtcgtatcctgcatcacagttcatgaaaacatcaactttatg
cctttaggttttgcagatggaagtgtggttttaaccaagggtgacataacacgagacaga
cacagtaagacccaaattttgcaggaagggagcttccctgttacaggcatggctttcaga
caaaccggcaagacgacccatctatttgttgtaacaacagagtatgtgaaggcctatgag
ttgacacttaaggattacccattcatcgaactagattctcatggctgcggcctgcgttgc
tcagccttgtctgacccatcgcaagacatgcaatttgtggtggccggtaacgaatgcata
tatttataccagccagacgagagaggaccctgctttgcttttgaaggacagaaattgatt
gtgcattggtatcggggctacctgatcattgtaacaaaagagagatcagactttgctgtg
cgttcaggagatagccatgcacctgacagacagacattgaccatttatgatttgggaaac
aagcttattgcatacagctgcacactgactgaggtggtggatgttttggctgaatggggc
tctctttacgtcctgacacgtgatggcttcctgcatgctttccatgagaaggacacacag
actaaactagagatgctgtttaagaaaaacctgtatgtaatggccatttctctggcaaaa
agtcagcacctggacagtgatgggttgtctgagatctttcgccagtatggagatcaccta
tatagtaaaggggatcatgatggggctatccaacaatatatccgcacaattggaaaatta
gagccctcctatgtgatccgaaaatttctagatgcccagcggatacataatttgacagcg
tatcttcaggctttgcatttgcaatctctagccaatgcagaccacaccactctattactg
aactgctacacaaagctaaaggacagcgctcatctggaggagtttattaaaggcagtgtg
gatgaagtacattttgatgtggaaatagctattaaggttcttcggcaagctggttatcat
tcgcatgccctgtacttggcagaaaaacatgcccatcatgaatggtatttaaagatacag
ctagaagatatcaagaattttcaagaagctttgagatacattggacggcttcctttccct
caaatagaaagcaatatgaaatgctacggaaagatactcatgtatcatgtgcccaatgag
acaacacagctgttgaaagacttatgtaccaactttgctcagaatgagggaagagagaag
gcaaatcctgaagaattcattcctatttttgccaacaatccttgtgaactaaaggacttt
cttgaacatatgatacaagtactgagtgattccccccaaggagtatatgatactttgctg
gagttgcgtttgcaaaactgggcacatgagaaagagcctcaagcacggcagcaacttcaa
aatgatgtcatgacccttctgaagagtggacactttaagaatgtgtttgataaagctctt
gtcctatgccaaatgcacaattttcagaaaggagtgctgtatctgtatgagcaaggcaaa
ctttttcagcaaattatgcattaccacatgcaaaacaatcagtaccaagaagtgattgaa
gcttgtaaacagtacggggagcaagagagctgtctgtgggagcaagcacttggctacttt
gcccgcaaagaggaagattgtaaggaacacattgccactgtgctgaaacatattgaaagg
aaaaatctcatgcctccgctactagtggtgcagacactggctcataattccacagccact
ctgtctgtgattagggactacttaatcaacaaaatgcagaaactgagccagcagacagaa
gatgatgaaagaactgttaaaaaatacagggaggagaccgctcgcattcgccgagagatc
cacgaactgcgtaatagccccaagactttccagaagacgaaatgtagtatctgcagcagt
gctctagaacttccgtcggtgcactttttgtgcggtcactcctttcaccaacactgcttt
gagagctacgcagagagtgactctgactgcccaacctgcctgcctgagaaccgccaagtc
cttgatatgatcagagcccaggaggagaagaaagatctctatgagcacttccagcaccag
ctgaagtgttccagtgatggattcagtgtggttgcggaatactttggtcgtggtgtgttc
aacaaacttacgctaattacagatgtccctgcagagaaatccagaataacaaaggatgtg
gggttacaacgtgacctgcttataaacaccagaagaaatgtgtaa
DBGET
integrated database retrieval system
